Louis BECQUEY

Better parallel statistics computation

......@@ -1638,6 +1638,7 @@ def sql_ask_database(conn, sql, warn_every = 10):
@trace_unhandled_exceptions
def sql_execute(conn, sql, many=False, data=None, warn_every=10):
conn.execute('pragma journal_mode=wal') # Allow multiple other readers to ask things while we execute this writing query
for _ in range(100): # retry 100 times if it fails
try:
if many:
......
......@@ -3,7 +3,7 @@
# Run RNANet
cd /home/lbecquey/Projects/RNANet;
rm -f stdout.txt stderr.txt errors.txt;
time './RNAnet.py --3d-folder /home/lbequey/Data/RNA/3D/ --seq-folder /home/lbecquey/Data/RNA/sequences/ -s -r 20.0' > stdout.txt 2> stderr.txt;
time './RNAnet.py --3d-folder /home/lbequey/Data/RNA/3D/ --seq-folder /home/lbecquey/Data/RNA/sequences/ -s -r 20.0 --archive' > stdout.txt 2> stderr.txt;
# Sync in Seafile
seaf-cli start;
......
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