Louis BECQUEY / RNANet

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Louis BECQUEY
60f0af5a 1 parent 149243a0

Modified couple of GMM n modes

Inline Side-by-side
Showing 3 changed files with 26 additions and 66 deletions
......@@ -55,7 +55,7 @@ modes_data = {
"P-O5'-C5'":2, "O5'-C5'-C4'":1, "C5'-C4'-P":2, "C5'-C4'-C1'":2, "C4'-P-O5'":2, "C4'-C1'-B1":2, "C1'-C4'-P":2, "C1'-B1-B2":2,
# HiRE-RNA, torsions
"P-O5'-C5'-C4'":1, "O5'-C5'-C4'-P°":3, "O5'-C5'-C4'-C1'":3, "C5'-C4'-P°-O5'°":3, "C5'-C4'-C1'-B1":2, "C4'-P°-O5'°-C5'°":3, "C4'-C1'-B1-B2":3, "C1'-C4'-P°-O5'°":3,
"P-O5'-C5'-C4'":3, "O5'-C5'-C4'-P°":3, "O5'-C5'-C4'-C1'":3, "C5'-C4'-P°-O5'°":3, "C5'-C4'-C1'-B1":2, "C4'-P°-O5'°-C5'°":3, "C4'-C1'-B1-B2":3, "C1'-C4'-P°-O5'°":3,
# HiRE-RNA, basepairs
"cWW_AA_tips_distance":3, "cWW_AA_C1'-B1-B1pair":1, "cWW_AA_B1-B1pair-C1'pair":1, "cWW_AA_C4'-C1'-B1-B1pair":2, "cWW_AA_B1-B1pair-C1'pair-C4'pair":3, "cWW_AA_alpha_1":2, "cWW_AA_alpha_2":3, "cWW_AA_dB1":3, "cWW_AA_dB2":3,
......@@ -172,7 +172,7 @@ modes_data = {
"tWH_CG_tips_distance":4, "tWH_CG_C1'-B1-B1pair":2, "tWH_CG_B1-B1pair-C1'pair":1, "tWH_CG_C4'-C1'-B1-B1pair":2, "tWH_CG_B1-B1pair-C1'pair-C4'pair":3, "tWH_CG_alpha_1":2, "tWH_CG_alpha_2":1, "tWH_CG_dB1":3, "tWH_CG_dB2":2,
"cHW_CG_tips_distance":3, "cHW_CG_C1'-B1-B1pair":2, "cHW_CG_B1-B1pair-C1'pair":2, "cHW_CG_C4'-C1'-B1-B1pair":1, "cHW_CG_B1-B1pair-C1'pair-C4'pair":2, "cHW_CG_alpha_1":1, "cHW_CG_alpha_2":2, "cHW_CG_dB1":2, "cHW_CG_dB2":2,
"tHW_CG_tips_distance":5, "tHW_CG_C1'-B1-B1pair":1, "tHW_CG_B1-B1pair-C1'pair":2, "tHW_CG_C4'-C1'-B1-B1pair":1, "tHW_CG_B1-B1pair-C1'pair-C4'pair":2, "tHW_CG_alpha_1":3, "tHW_CG_alpha_2":2, "tHW_CG_dB1":4, "tHW_CG_dB2":3,
"cWS_CG_tips_distance":2, "cWS_CG_C1'-B1-B1pair":1, "cWS_CG_B1-B1pair-C1'pair":1, "cWS_CG_C4'-C1'-B1-B1pair":1, "cWS_CG_B1-B1pair-C1'pair-C4'pair":1, "cWS_CG_alpha_1":1, "cWS_CG_alpha_2":2, "cWS_CG_dB1":2, "cWS_CG_dB2":3,
"cWS_CG_tips_distance":2, "cWS_CG_C1'-B1-B1pair":1, "cWS_CG_B1-B1pair-C1'pair":1, "cWS_CG_C4'-C1'-B1-B1pair":2, "cWS_CG_B1-B1pair-C1'pair-C4'pair":1, "cWS_CG_alpha_1":1, "cWS_CG_alpha_2":2, "cWS_CG_dB1":2, "cWS_CG_dB2":3,
"tWS_CG_tips_distance":2, "tWS_CG_C1'-B1-B1pair":3, "tWS_CG_B1-B1pair-C1'pair":1, "tWS_CG_C4'-C1'-B1-B1pair":2, "tWS_CG_B1-B1pair-C1'pair-C4'pair":1, "tWS_CG_alpha_1":2, "tWS_CG_alpha_2":1, "tWS_CG_dB1":2, "tWS_CG_dB2":4,
"cSW_CG_tips_distance":7, "cSW_CG_C1'-B1-B1pair":1, "cSW_CG_B1-B1pair-C1'pair":2, "cSW_CG_C4'-C1'-B1-B1pair":2, "cSW_CG_B1-B1pair-C1'pair-C4'pair":3, "cSW_CG_alpha_1":1, "cSW_CG_alpha_2":2, "cSW_CG_dB1":1, "cSW_CG_dB2":3,
"tSW_CG_tips_distance":4, "tSW_CG_C1'-B1-B1pair":1, "tSW_CG_B1-B1pair-C1'pair":2, "tSW_CG_C4'-C1'-B1-B1pair":3, "tSW_CG_B1-B1pair-C1'pair-C4'pair":2, "tSW_CG_alpha_1":1, "tSW_CG_alpha_2":2, "tSW_CG_dB1":7, "tSW_CG_dB2":2,
......@@ -190,7 +190,7 @@ modes_data = {
"tWH_CU_tips_distance":1, "tWH_CU_C1'-B1-B1pair":2, "tWH_CU_B1-B1pair-C1'pair":2, "tWH_CU_C4'-C1'-B1-B1pair":3, "tWH_CU_B1-B1pair-C1'pair-C4'pair":2, "tWH_CU_alpha_1":3, "tWH_CU_alpha_2":3, "tWH_CU_dB1":5, "tWH_CU_dB2":2,
"cHW_CU_tips_distance":3, "cHW_CU_C1'-B1-B1pair":2, "cHW_CU_B1-B1pair-C1'pair":2, "cHW_CU_C4'-C1'-B1-B1pair":1, "cHW_CU_B1-B1pair-C1'pair-C4'pair":3, "cHW_CU_alpha_1":2, "cHW_CU_alpha_2":2, "cHW_CU_dB1":1, "cHW_CU_dB2":3,
"tHW_CU_tips_distance":8, "tHW_CU_C1'-B1-B1pair":1, "tHW_CU_B1-B1pair-C1'pair":1, "tHW_CU_C4'-C1'-B1-B1pair":3, "tHW_CU_B1-B1pair-C1'pair-C4'pair":2, "tHW_CU_alpha_1":1, "tHW_CU_alpha_2":2, "tHW_CU_dB1":3, "tHW_CU_dB2":3,
"cWS_CU_tips_distance":4, "cWS_CU_C1'-B1-B1pair":1, "cWS_CU_B1-B1pair-C1'pair":2, "cWS_CU_C4'-C1'-B1-B1pair":2, "cWS_CU_B1-B1pair-C1'pair-C4'pair":2, "cWS_CU_alpha_1":3, "cWS_CU_alpha_2":2, "cWS_CU_dB1":4, "cWS_CU_dB2":2,
"cWS_CU_tips_distance":4, "cWS_CU_C1'-B1-B1pair":1, "cWS_CU_B1-B1pair-C1'pair":2, "cWS_CU_C4'-C1'-B1-B1pair":3, "cWS_CU_B1-B1pair-C1'pair-C4'pair":2, "cWS_CU_alpha_1":3, "cWS_CU_alpha_2":2, "cWS_CU_dB1":4, "cWS_CU_dB2":2,
"tWS_CU_tips_distance":5, "tWS_CU_C1'-B1-B1pair":3, "tWS_CU_B1-B1pair-C1'pair":1, "tWS_CU_C4'-C1'-B1-B1pair":2, "tWS_CU_B1-B1pair-C1'pair-C4'pair":2, "tWS_CU_alpha_1":2, "tWS_CU_alpha_2":1, "tWS_CU_dB1":3, "tWS_CU_dB2":5,
"cSW_CU_tips_distance":3, "cSW_CU_C1'-B1-B1pair":2, "cSW_CU_B1-B1pair-C1'pair":2, "cSW_CU_C4'-C1'-B1-B1pair":2, "cSW_CU_B1-B1pair-C1'pair-C4'pair":3, "cSW_CU_alpha_1":3, "cSW_CU_alpha_2":3, "cSW_CU_dB1":2, "cSW_CU_dB2":4,
"tSW_CU_tips_distance":7, "tSW_CU_C1'-B1-B1pair":2, "tSW_CU_B1-B1pair-C1'pair":2, "tSW_CU_C4'-C1'-B1-B1pair":2, "tSW_CU_B1-B1pair-C1'pair-C4'pair":2, "tSW_CU_alpha_1":2, "tSW_CU_alpha_2":2, "tSW_CU_dB1":2, "tSW_CU_dB2":2,
......@@ -203,7 +203,7 @@ modes_data = {
"cSS_CU_tips_distance":5, "cSS_CU_C1'-B1-B1pair":2, "cSS_CU_B1-B1pair-C1'pair":2, "cSS_CU_C4'-C1'-B1-B1pair":1, "cSS_CU_B1-B1pair-C1'pair-C4'pair":1, "cSS_CU_alpha_1":2, "cSS_CU_alpha_2":3, "cSS_CU_dB1":6, "cSS_CU_dB2":1,
"tSS_CU_tips_distance":5, "tSS_CU_C1'-B1-B1pair":2, "tSS_CU_B1-B1pair-C1'pair":3, "tSS_CU_C4'-C1'-B1-B1pair":2, "tSS_CU_B1-B1pair-C1'pair-C4'pair":2, "tSS_CU_alpha_1":3, "tSS_CU_alpha_2":3, "tSS_CU_dB1":7, "tSS_CU_dB2":2,
"cWW_GA_tips_distance":5, "cWW_GA_C1'-B1-B1pair":1, "cWW_GA_B1-B1pair-C1'pair":1, "cWW_GA_C4'-C1'-B1-B1pair":2, "cWW_GA_B1-B1pair-C1'pair-C4'pair":2, "cWW_GA_alpha_1":1, "cWW_GA_alpha_2":1, "cWW_GA_dB1":2, "cWW_GA_dB2":1,
"tWW_GA_tips_distance":6, "tWW_GA_C1'-B1-B1pair":1, "tWW_GA_B1-B1pair-C1'pair":1, "tWW_GA_C4'-C1'-B1-B1pair":1, "tWW_GA_B1-B1pair-C1'pair-C4'pair":2, "tWW_GA_alpha_1":1, "tWW_GA_alpha_2":2, "tWW_GA_dB1":1, "tWW_GA_dB2":2,
"tWW_GA_tips_distance":6, "tWW_GA_C1'-B1-B1pair":1, "tWW_GA_B1-B1pair-C1'pair":1, "tWW_GA_C4'-C1'-B1-B1pair":1, "tWW_GA_B1-B1pair-C1'pair-C4'pair":2, "tWW_GA_alpha_1":2, "tWW_GA_alpha_2":2, "tWW_GA_dB1":1, "tWW_GA_dB2":2,
"cWH_GA_tips_distance":2, "cWH_GA_C1'-B1-B1pair":1, "cWH_GA_B1-B1pair-C1'pair":1, "cWH_GA_C4'-C1'-B1-B1pair":3, "cWH_GA_B1-B1pair-C1'pair-C4'pair":2, "cWH_GA_alpha_1":2, "cWH_GA_alpha_2":1, "cWH_GA_dB1":2, "cWH_GA_dB2":2,
"tWH_GA_tips_distance":7, "tWH_GA_C1'-B1-B1pair":1, "tWH_GA_B1-B1pair-C1'pair":2, "tWH_GA_C4'-C1'-B1-B1pair":1, "tWH_GA_B1-B1pair-C1'pair-C4'pair":2, "tWH_GA_alpha_1":2, "tWH_GA_alpha_2":2, "tWH_GA_dB1":1, "tWH_GA_dB2":6,
"cHW_GA_tips_distance":4, "cHW_GA_C1'-B1-B1pair":2, "cHW_GA_B1-B1pair-C1'pair":2, "cHW_GA_C4'-C1'-B1-B1pair":2, "cHW_GA_B1-B1pair-C1'pair-C4'pair":3, "cHW_GA_alpha_1":1, "cHW_GA_alpha_2":2, "cHW_GA_dB1":1, "cHW_GA_dB2":4,
......@@ -227,7 +227,7 @@ modes_data = {
"cHW_GC_tips_distance":4, "cHW_GC_C1'-B1-B1pair":1, "cHW_GC_B1-B1pair-C1'pair":1, "cHW_GC_C4'-C1'-B1-B1pair":2, "cHW_GC_B1-B1pair-C1'pair-C4'pair":2, "cHW_GC_alpha_1":1, "cHW_GC_alpha_2":1, "cHW_GC_dB1":3, "cHW_GC_dB2":4,
"tHW_GC_tips_distance":5, "tHW_GC_C1'-B1-B1pair":2, "tHW_GC_B1-B1pair-C1'pair":2, "tHW_GC_C4'-C1'-B1-B1pair":2, "tHW_GC_B1-B1pair-C1'pair-C4'pair":2, "tHW_GC_alpha_1":2, "tHW_GC_alpha_2":2, "tHW_GC_dB1":2, "tHW_GC_dB2":4,
"cWS_GC_tips_distance":8, "cWS_GC_C1'-B1-B1pair":1, "cWS_GC_B1-B1pair-C1'pair":1, "cWS_GC_C4'-C1'-B1-B1pair":2, "cWS_GC_B1-B1pair-C1'pair-C4'pair":2, "cWS_GC_alpha_1":2, "cWS_GC_alpha_2":1, "cWS_GC_dB1":2, "cWS_GC_dB2":1,
"tWS_GC_tips_distance":2, "tWS_GC_C1'-B1-B1pair":1, "tWS_GC_B1-B1pair-C1'pair":1, "tWS_GC_C4'-C1'-B1-B1pair":3, "tWS_GC_B1-B1pair-C1'pair-C4'pair":2, "tWS_GC_alpha_1":1, "tWS_GC_alpha_2":1, "tWS_GC_dB1":4, "tWS_GC_dB2":5,
"tWS_GC_tips_distance":2, "tWS_GC_C1'-B1-B1pair":1, "tWS_GC_B1-B1pair-C1'pair":1, "tWS_GC_C4'-C1'-B1-B1pair":3, "tWS_GC_B1-B1pair-C1'pair-C4'pair":2, "tWS_GC_alpha_1":2, "tWS_GC_alpha_2":1, "tWS_GC_dB1":4, "tWS_GC_dB2":5,
"cSW_GC_tips_distance":4, "cSW_GC_C1'-B1-B1pair":2, "cSW_GC_B1-B1pair-C1'pair":3, "cSW_GC_C4'-C1'-B1-B1pair":1, "cSW_GC_B1-B1pair-C1'pair-C4'pair":2, "cSW_GC_alpha_1":3, "cSW_GC_alpha_2":2, "cSW_GC_dB1":3, "cSW_GC_dB2":2,
"tSW_GC_tips_distance":2, "tSW_GC_C1'-B1-B1pair":1, "tSW_GC_B1-B1pair-C1'pair":3, "tSW_GC_C4'-C1'-B1-B1pair":1, "tSW_GC_B1-B1pair-C1'pair-C4'pair":2, "tSW_GC_alpha_1":2, "tSW_GC_alpha_2":2, "tSW_GC_dB1":4, "tSW_GC_dB2":2,
"cHH_GC_tips_distance":1, "cHH_GC_C1'-B1-B1pair":3, "cHH_GC_B1-B1pair-C1'pair":1, "cHH_GC_C4'-C1'-B1-B1pair":2, "cHH_GC_B1-B1pair-C1'pair-C4'pair":1, "cHH_GC_alpha_1":2, "cHH_GC_alpha_2":2, "cHH_GC_dB1":3, "cHH_GC_dB2":3,
......@@ -1884,7 +1884,7 @@ def concat_jsons(flist, outfilename):
result = []
for f in flist:
if not os.path.isfile(f):
warn("Unable to find "+f)
warn("Unable to find "+f.split('/')[-1])
continue
with open(f, "rb") as infile:
result.append(json.load(infile))
......
......@@ -723,7 +723,6 @@
6r7b_1_E
6o7i_1_I
6o7h_1_K
7a5g_1_A3
7l6t_1_C
7jyy_1_F
7jyy_1_E
......@@ -816,7 +815,6 @@
6ppn_1_A
6ppn_1_I
5flx_1_Z
7a5g_1_B3
6eri_1_AX
7k5l_1_R
7d80_1_Y
......@@ -853,7 +851,6 @@
4x9e_1_H
6z1p_1_BB
6z1p_1_BA
7a5g_1_A6
2uxd_1_X
6ywe_1_BB
3ol9_1_D
......@@ -1053,8 +1050,6 @@
6l74_1_I
5uh9_1_I
7a5j_1_X
7a5g_1_24
7a5g_1_C
6sag_1_R
4udv_1_R
5zsc_1_D
......@@ -1518,25 +1513,20 @@
7d0g_1_A_805-913
7d0f_1_A_817-913
7o7z_1_AH_144-220
7a5g_1_A3_1-1454
7a5g_1_A6_4-949
4c9d_1_D_29-1
4c9d_1_C_29-1
7a5g_1_24_1-70
7a5g_1_C_1-70
7a5g_1_j_1-73
7aih_1_1_2984-3610
7aih_1_1_2400-2963
7ane_1_2_2489-3115
7aih_1_1_2984-3610
7ane_1_2_1904-2468
7ane_1_2_2489-3115
5g2x_1_A_595-692
7aor_1_2_2589-3210
7aor_1_2_2020-2579
7aor_1_2_2589-3210
7a5p_1_2_259-449
7aor_1_A_2589-3210
7aor_1_A_2020-2579
7am2_1_1_2491-3117
7aor_1_A_2589-3210
7am2_1_1_1904-2470
7ane_1_1_2489-3115
7am2_1_1_2491-3117
7ane_1_1_1904-2468
7ane_1_1_2489-3115
6uz7_1_8_2140-2825
......
......@@ -1145,7 +1145,7 @@ Could not find nucleotides of chain U3 in annotation 7a5k.json. Either there is
Could not find nucleotides of chain U in annotation 6nu2.json. Either there is a problem with 6nu2 mmCIF download, or the bases are not resolved in the structure. Delete it and retry.
7a5g_1_U3
Could not download and/or find annotations for 7a5g_1_U3.
Could not find nucleotides of chain U3 in annotation 7a5g.json. Either there is a problem with 7a5g mmCIF download, or the bases are not resolved in the structure. Delete it and retry.
6nu3_1_U
Could not find nucleotides of chain U in annotation 6nu3.json. Either there is a problem with 6nu3 mmCIF download, or the bases are not resolved in the structure. Delete it and retry.
......@@ -2173,9 +2173,6 @@ Sequence is too short. (< 5 resolved nts)
6o7h_1_K
Sequence is too short. (< 5 resolved nts)
7a5g_1_A3
Could not download and/or find annotations for 7a5g_1_A3.
7l6t_1_C
Sequence is too short. (< 5 resolved nts)
......@@ -2452,9 +2449,6 @@ Sequence is too short. (< 5 resolved nts)
5flx_1_Z
Could not find nucleotides of chain Z in annotation 5flx.json. Either there is a problem with 5flx mmCIF download, or the bases are not resolved in the structure. Delete it and retry.
7a5g_1_B3
Could not download and/or find annotations for 7a5g_1_B3.
6eri_1_AX
Could not find nucleotides of chain AX in annotation 6eri.json. Either there is a problem with 6eri mmCIF download, or the bases are not resolved in the structure. Delete it and retry.
......@@ -2563,9 +2557,6 @@ Could not find nucleotides of chain BB in annotation 6z1p.json. Either there is
6z1p_1_BA
Could not find nucleotides of chain BA in annotation 6z1p.json. Either there is a problem with 6z1p mmCIF download, or the bases are not resolved in the structure. Delete it and retry.
7a5g_1_A6
Could not download and/or find annotations for 7a5g_1_A6.
2uxd_1_X
Sequence is too short. (< 5 resolved nts)
......@@ -3163,12 +3154,6 @@ Sequence is too short. (< 5 resolved nts)
7a5j_1_X
Could not find nucleotides of chain X in annotation 7a5j.json. Either there is a problem with 7a5j mmCIF download, or the bases are not resolved in the structure. Delete it and retry.
7a5g_1_24
Could not download and/or find annotations for 7a5g_1_24.
7a5g_1_C
Could not download and/or find annotations for 7a5g_1_C.
6sag_1_R
Sequence is too short. (< 5 resolved nts)
......@@ -3365,7 +3350,7 @@ Sequence is too short. (< 5 resolved nts)
Sequence is too short. (< 5 resolved nts)
7a5g_1_J
Could not download and/or find annotations for 7a5g_1_J.
Could not find nucleotides of chain J in annotation 7a5g.json. Either there is a problem with 7a5g mmCIF download, or the bases are not resolved in the structure. Delete it and retry.
6gx6_1_B
Sequence is too short. (< 5 resolved nts)
......@@ -4558,67 +4543,52 @@ Could not find nucleotides of chain A in annotation 7d0f.json. Either there is a
7o7z_1_AH_144-220
Could not find nucleotides of chain AH in annotation 7o7z.json. Either there is a problem with 7o7z mmCIF download, or the bases are not resolved in the structure. Delete it and retry.
7a5g_1_A3_1-1454
Could not download and/or find annotations for 7a5g_1_A3_1-1454.
7a5g_1_A6_4-949
Could not download and/or find annotations for 7a5g_1_A6_4-949.
4c9d_1_D_29-1
Mapping is reversed, this case is not supported (yet).
4c9d_1_C_29-1
Mapping is reversed, this case is not supported (yet).
7a5g_1_24_1-70
Could not download and/or find annotations for 7a5g_1_24_1-70.
7a5g_1_C_1-70
Could not download and/or find annotations for 7a5g_1_C_1-70.
7a5g_1_j_1-73
Could not download and/or find annotations for 7a5g_1_j_1-73.
7aih_1_1_2984-3610
7aih_1_1_2400-2963
Could not find nucleotides of chain 1 in annotation 7aih.json. Either there is a problem with 7aih mmCIF download, or the bases are not resolved in the structure. Delete it and retry.
7aih_1_1_2400-2963
7aih_1_1_2984-3610
Could not find nucleotides of chain 1 in annotation 7aih.json. Either there is a problem with 7aih mmCIF download, or the bases are not resolved in the structure. Delete it and retry.
7ane_1_2_2489-3115
7ane_1_2_1904-2468
Could not find nucleotides of chain 2 in annotation 7ane.json. Either there is a problem with 7ane mmCIF download, or the bases are not resolved in the structure. Delete it and retry.
7ane_1_2_1904-2468
7ane_1_2_2489-3115
Could not find nucleotides of chain 2 in annotation 7ane.json. Either there is a problem with 7ane mmCIF download, or the bases are not resolved in the structure. Delete it and retry.
5g2x_1_A_595-692
Sequence is too short. (< 5 resolved nts)
7aor_1_2_2589-3210
7aor_1_2_2020-2579
Could not find nucleotides of chain 2 in annotation 7aor.json. Either there is a problem with 7aor mmCIF download, or the bases are not resolved in the structure. Delete it and retry.
7aor_1_2_2020-2579
7aor_1_2_2589-3210
Could not find nucleotides of chain 2 in annotation 7aor.json. Either there is a problem with 7aor mmCIF download, or the bases are not resolved in the structure. Delete it and retry.
7a5p_1_2_259-449
Could not find nucleotides of chain 2 in annotation 7a5p.json. Either there is a problem with 7a5p mmCIF download, or the bases are not resolved in the structure. Delete it and retry.
7aor_1_A_2589-3210
7aor_1_A_2020-2579
Could not find nucleotides of chain A in annotation 7aor.json. Either there is a problem with 7aor mmCIF download, or the bases are not resolved in the structure. Delete it and retry.
7aor_1_A_2020-2579
7aor_1_A_2589-3210
Could not find nucleotides of chain A in annotation 7aor.json. Either there is a problem with 7aor mmCIF download, or the bases are not resolved in the structure. Delete it and retry.
7am2_1_1_2491-3117
7am2_1_1_1904-2470
Could not find nucleotides of chain 1 in annotation 7am2.json. Either there is a problem with 7am2 mmCIF download, or the bases are not resolved in the structure. Delete it and retry.
7am2_1_1_1904-2470
7am2_1_1_2491-3117
Could not find nucleotides of chain 1 in annotation 7am2.json. Either there is a problem with 7am2 mmCIF download, or the bases are not resolved in the structure. Delete it and retry.
7ane_1_1_2489-3115
7ane_1_1_1904-2468
Could not find nucleotides of chain 1 in annotation 7ane.json. Either there is a problem with 7ane mmCIF download, or the bases are not resolved in the structure. Delete it and retry.
7ane_1_1_1904-2468
7ane_1_1_2489-3115
Could not find nucleotides of chain 1 in annotation 7ane.json. Either there is a problem with 7ane mmCIF download, or the bases are not resolved in the structure. Delete it and retry.
6uz7_1_8_2140-2825
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