Louis BECQUEY

typo in Jan 2021 update

......@@ -2501,7 +2501,7 @@ def work_pssm_remap(f, fill_gaps):
many=True, data=re_mappings)
# Delete alignment columns that are not used anymore from the database
current_family_columns = [ x[0] for x in sql_ask_database(conn, f"SELECT index_ali FROM align_column WHERE rfam_acc = {f}";)]
current_family_columns = [ x[0] for x in sql_ask_database(conn, f"SELECT index_ali FROM align_column WHERE rfam_acc = {f};")]
unused = []
for col in current_family_columns:
if col not in columns_to_save:
......
......@@ -4,7 +4,7 @@ cd /home/lbecquey/Projects/RNANet
rm -rf latest_run.log errors.txt
# Run RNANet
bash -c 'time python3.8 /RNAnet.py --3d-folder /home/lbecquey/Data/RNA/3D/ --seq-folder /home/lbecquey/Data/RNA/sequences/ -r 20.0 --extract -s --archive' > latest_run.log 2>&1
bash -c 'time python3.8 ./RNAnet.py --3d-folder /home/lbecquey/Data/RNA/3D/ --seq-folder /home/lbecquey/Data/RNA/sequences/ -r 20.0 --extract -s --archive' > latest_run.log 2>&1
echo 'Compressing RNANet.db.gz...' >> latest_run.log
touch results/RNANet.db # update last modification date
gzip -k /home/lbecquey/Projects/RNANet/results/RNANet.db # compress it
......