Louis BECQUEY / RNANet

24 Apr, 2021 1 commit
- delete unused cm_coords at updates · d4cb6f78
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  Louis BECQUEY authored 2021-04-24 09:18:25 +0200
19 Apr, 2021 8 commits
- correct permissions on python script in Docker container · 4e8abda3
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  Louis BECQUEY authored 2021-04-19 17:07:14 +0200
- updated links between doc pages · 60b9e5b0
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  Louis BECQUEY authored 2021-04-19 13:00:25 +0200
- doc restructuration · 0b093342
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  Louis BECQUEY authored 2021-04-19 12:46:22 +0200
- updated automation script · 3c39dd7a
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  Louis BECQUEY authored 2021-04-19 12:13:11 +0200
- removal of doubtful mappings from known mappings too · 69c16ae7
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  Louis BECQUEY authored 2021-04-19 11:53:58 +0200
- previous fix fixed nothing · e56d4f9f
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  Louis BECQUEY authored 2021-04-19 10:57:21 +0200
- 3D alignments archival issue solved · 04f27675
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  Louis BECQUEY authored 2021-04-19 10:52:59 +0200
- beta 1.5 pre-commit for docker building · 30c7b86f
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  Louis BECQUEY authored 2021-04-19 09:24:09 +0200
18 Apr, 2021 1 commit
- solved issue angles still in degrees · 8638dc73
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  Louis BECQUEY authored 2021-04-18 12:37:00 +0200
05 Apr, 2021 2 commits
- Removed all dependencies with pydca for the moment · 0281da31
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  Khodor HANNOUSH authored 2021-04-05 16:41:44 +0200
- Separated pydca from RNANet · 8b6b41c8
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  Khodor HANNOUSH authored 2021-04-05 08:37:02 +0200
04 Apr, 2021 3 commits
- Merged Khodor-internship with ahead master · fa394f4a
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  Louis BECQUEY authored 2021-04-04 21:28:22 +0200
- Dist matrices only for match states positions · a3e754e5
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  Louis BECQUEY authored 2021-04-04 21:20:31 +0200
- Merged Khodor-internship to master + general cmalign options · 1eff7ed5
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  Louis Becquey authored 2021-04-04 21:04:06 +0200
02 Apr, 2021 1 commit
- Moved to version beta 1.4 by making sina as a command line and adding pydca for feature calculation · 4846d49a
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  Khodor HANNOUSH authored 2021-04-02 16:51:27 +0200
06 Mar, 2021 1 commit
- added cm coordinates and consensus 2D to align_colum · 82eddfba
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  Louis BECQUEY authored 2021-03-06 18:55:13 +0100
05 Mar, 2021 1 commit
- Added infernal related new ideas to the To-do list · 8eb8652e
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  Louis BECQUEY authored 2021-03-05 09:23:03 +0100
02 Mar, 2021 2 commits
- Changed codes=codelists[1] to codelists[2] · e6dff723
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  Khodor authored 2021-03-02 14:49:48 +0100
- Updated RNANet to store only representative members · b1355a19
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  Khodor authored 2021-03-02 14:40:29 +0100
08 Feb, 2021 1 commit
- Added stuff to the todo list · 1498f767
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  Louis BECQUEY authored 2021-02-08 14:10:42 +0100
01 Feb, 2021 3 commits
- catching warnings from divisions by zero · 6086e508
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  Louis BECQUEY authored 2021-02-01 14:41:33 +0100
- do not save individual distance matrices files for LSU/SSUs · 3afda63d
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  Louis BECQUEY authored 2021-02-01 09:45:03 +0100
- do not save individual distance matrices files for LSU/SSUs · 36c27f94
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  Louis BECQUEY authored 2021-02-01 09:43:51 +0100
31 Jan, 2021 5 commits
- prevent div by zero if no 3D structures in the folder · 810f5fcf
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  Louis BECQUEY authored 2021-01-31 14:49:45 +0100
- typo in 3D_only folder name · a8cd46e8
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  Louis BECQUEY authored 2021-01-31 13:32:12 +0100
- from-scratch now removes CIFs and annotations · e70f9e6a
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  Louis BECQUEY authored 2021-01-31 13:05:44 +0100
- updated command options list · 550e1ac2
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  Louis BECQUEY authored 2021-01-31 12:35:33 +0100
- New documentation · b5935bd6
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  Louis BECQUEY authored 2021-01-31 12:29:53 +0100
30 Jan, 2021 6 commits
- split rRNA distance matrices computations apart · 4de494b7
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  Louis BECQUEY authored 2021-01-30 18:50:12 +0100
- MutableSeqs overload of ALignIO · dc3fd966
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  Louis BECQUEY authored 2021-01-30 12:14:18 +0100
- int number of workers · f6cb9697
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  Louis BECQUEY authored 2021-01-30 01:29:12 +0100
- 0.6 nworkers for stats · 8b259677
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  Louis BECQUEY authored 2021-01-30 01:26:47 +0100
- v1.3 beta uncommented · edde38ec
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  Louis BECQUEY authored 2021-01-30 01:22:28 +0100
- v1.3 large update · e74c6fe3
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  Louis BECQUEY authored 2021-01-30 01:17:15 +0100
28 Jan, 2021 3 commits
- corrections des statistiques · 838a6824
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  Louis BECQUEY authored 2021-01-28 22:26:44 +0100
- typo in Jan 2021 update · 693d73e7
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  Louis BECQUEY authored 2021-01-28 16:00:03 +0100
- January 2021 update · d0371fa5
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  Louis BECQUEY authored 2021-01-28 15:52:56 +0100
21 Dec, 2020 1 commit
- updated docker generator · 3765dbe7
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  Louis BECQUEY authored 2020-12-21 21:14:30 +0100
17 Dec, 2020 1 commit
- script to measure angles + details · 177d6e94
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  Louis BECQUEY authored 2020-12-17 09:46:42 +0100