README.txt
485 Bytes
BruteSmORF
Exhaustive approach for solving difficult cases of small open reading frame annotation: the PreImplantation Factor example
The PreImplantation Factor: a difficult case of small open reading frame annotation solved by an exhaustive approach
PIF is difficult:
- short
- does not start by M
csplit -z input.fasta '/>/' '{*}'
https://www.megasoftware.net/web_help_7/rh_iupac_single_letter_codes.htm
/* https://www.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi */