QT += widgets

CONFIG(debug, release|debug):DEFINES += _DEBUG ENABLE_ASSERTS

SOURCES += \
    ../../../../dlib/dlib-19.17/dlib/all/source.cpp \
    clustering.cpp \
    graph.cpp \
    main.cpp \
    rna.cpp \
    structure.cpp \
    interaction.cpp \
    complexe.cpp \
    solinteraction.cpp \
    predictor.cpp \
    utils.cpp \
    Motifs/helix.cpp \
    Motifs/hairpinloop.cpp \
    Motifs/motif.cpp \
    Motifs/multiloop.cpp \
    Motifs/pseudoknot.cpp \
    Motifs/interloop.cpp \
    Extract_data/fa.cpp \
    Extract_data/extract_str_inter.cpp \
    IP/biclique.cpp \
    IP/boip.cpp \
    IP/boipsolution.cpp \
    IP/findkbestparetoset.cpp \
    IP/ip.cpp \
    IP/ipcomp.cpp \
    IP/ipchromaticgraph.cpp \
    IP/complexip.cpp \
    Extract_data/extract_probing_data.cpp \
    Extract_data/extract_user_ct_old.cpp \
    Extract_data/extract_user_ct.cpp

HEADERS += \
    clustering.h \
    graph.h \
    rna.h \
    structure.h \
    interaction.h \
    complexe.h \
    solinteraction.h \
    predictor.h \
    utils.h \
    Motifs/hairpinloop.h \
    Motifs/helix.h \
    Motifs/interloop.h \
    Motifs/motif.h \
    Motifs/multiloop.h \
    Motifs/pseudoknot.h \
    Extract_data/extract_str_inter.h \
    Extract_data/extract_user_ct.h \
    Extract_data/fa.h \
    IP/biclique.h \
    IP/boip.h \
    IP/boipsolution.h \
    IP/ip.h \
    IP/ipchromaticgraph.h \
    IP/ipcomp.h \
    IP/findkbestparetoset.h \
    IP/complexip.h \
    Extract_data/extract_probing_data.h \
    Extract_data/extract_user_ct_old.h


QMAKE_CXXFLAGS += -std=c++17



unix:!macx: LIBS += -L/opt/ibm/ILOG/CPLEX_Studio1263/cplex/lib/x86-64_linux/static_pic/ -lcplex
unix:!macx: LIBS += -L/usr/lib64/ -lRNA
unix:!macx: LIBS += -L/usr/local/lib/ -lnupackconc  -lnupackpfunc  -lnupackutils
unix:!macs: LIBS += -lX11 -lpthread

INCLUDEPATH += /opt/ibm/ILOG/CPLEX_Studio1263/cplex/include
INCLUDEPATH += /home/stan/Audrey/EVRY/dlib/dlib-19.17/
INCLUDEPATH += /usr/include/eigen3/
#INCLUDEPATH += /usr/include/
DEPENDPATH += /opt/ibm/ILOG/CPLEX_Studio1263/cplex/include
#DEPENDPATH += /usr/include/

unix:!macx: PRE_TARGETDEPS += /opt/ibm/ILOG/CPLEX_Studio1263/cplex/lib/x86-64_linux/static_pic/libcplex.a
unix:!macx: PRE_TARGETDEPS += /usr/lib64/libRNA.a
unix:!macx: PRE_TARGETDEPS += /usr/local/lib/libnupackconc.a
unix:!macx: PRE_TARGETDEPS += /usr/local/lib/libnupackpfunc.a
unix:!macx: PRE_TARGETDEPS += /usr/local/lib/libnupackutils.a