@@ -44,10 +44,10 @@ Thus, an example of command is:
-g NDB_00016_graph.txt \
-q NDB_00016_cliques.txt -m 20
```
The result of this command (terminal's standard output) will be the predicted secondary structures, represented with the dot-bracket notation.
The result of this command (terminal's standard output) will be the predicted secondary structures, represented with the [dot-bracket notation](https://www.tbi.univie.ac.at/RNA/ViennaRNA/doc/html/rna_structure_notations.html).
Other results will be written in the **NDB_00016_graph.txt** and **NDB_00016_cliques.txt** files (see options below).
<br/>
The same test can be performed with the files provided for **PDB_00805**.
A similar test can be performed with the files provided for **PDB_00805**.