Louis BECQUEY / RNANet

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Louis BECQUEY
36c27f94 1 parent 810f5fcf

do not save individual distance matrices files for LSU/SSUs

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Showing 1 changed file with 2 additions and 1 deletions
...@@ -952,7 +952,8 @@ def par_distance_matrix(filelist, f, label, consider_all_atoms, s): ...@@ -952,7 +952,8 @@ def par_distance_matrix(filelist, f, label, consider_all_atoms, s):
952 else: 952 else:
953 d[i,j] = get_euclidian_distance(coordinates_with_gaps[i], coordinates_with_gaps[j]) 953 d[i,j] = get_euclidian_distance(coordinates_with_gaps[i], coordinates_with_gaps[j])
954 954
955 - np.savetxt(runDir + '/results/distance_matrices/' + f + '_'+ label + '/'+ s.id.strip("\'") + '.csv', d, delimiter=",", fmt="%.3f") 955 + if f not in LSU_set an f not in SSU_set:
956 + np.savetxt(runDir + '/results/distance_matrices/' + f + '_'+ label + '/'+ s.id.strip("\'") + '.csv', d, delimiter=",", fmt="%.3f")
956 return 1-np.isnan(d).astype(int), np.nan_to_num(d), np.nan_to_num(d*d) 957 return 1-np.isnan(d).astype(int), np.nan_to_num(d), np.nan_to_num(d*d)
957 958
958 @trace_unhandled_exceptions 959 @trace_unhandled_exceptions
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