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5 additions
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2 deletions
1 | nohup.out | 1 | nohup.out |
2 | log_of_the_run.sh | 2 | log_of_the_run.sh |
3 | +latest_run.log | ||
3 | results/ | 4 | results/ |
5 | +archive/ | ||
4 | logs/ | 6 | logs/ |
5 | data/ | 7 | data/ |
6 | esl* | 8 | esl* |
... | @@ -15,4 +17,4 @@ LICENSE | ... | @@ -15,4 +17,4 @@ LICENSE |
15 | README.md | 17 | README.md |
16 | scripts/automate.sh | 18 | scripts/automate.sh |
17 | scripts/kill_rnanet.sh | 19 | scripts/kill_rnanet.sh |
18 | -scripts/build_docker_image.sh | ||
... | \ No newline at end of file | ... | \ No newline at end of file |
20 | +scripts/build_docker_image.sh | ... | ... |
... | @@ -22,4 +22,5 @@ rm x3dna-dssr | ... | @@ -22,4 +22,5 @@ rm x3dna-dssr |
22 | 22 | ||
23 | # to run, use something like: | 23 | # to run, use something like: |
24 | # docker run -v /home/persalteas/Data/RNA/3D/:/3D -v /home/persalteas/Data/RNA/sequences/:/sequences -v /home/persalteas/labo/:/runDir persalteas/rnanet [ additional options here ] | 24 | # docker run -v /home/persalteas/Data/RNA/3D/:/3D -v /home/persalteas/Data/RNA/sequences/:/sequences -v /home/persalteas/labo/:/runDir persalteas/rnanet [ additional options here ] |
25 | -# Without additional options, this runs a standard pass with known issues support, log output, and no statistics. The default resolution threshold is 4.0 Angstroms. | ||
... | \ No newline at end of file | ... | \ No newline at end of file |
25 | +# Without additional options, this runs a standard pass with known issues support, log output, and no statistics. The default resolution threshold is 4.0 Angstroms. | ||
26 | + | ... | ... |
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