Louis BECQUEY

merge with IBISC branch

#!/usr/bin/python3.8
import numpy as np
import pandas as pd
import concurrent.futures, Bio.PDB.StructureBuilder, getopt, gzip, io, itertools, json, os, pickle, psutil, re, requests, signal, sqlalchemy, sqlite3, subprocess, sys, time, traceback, warnings
import concurrent.futures, Bio.PDB.StructureBuilder, getopt, gzip, io, json, os, pickle, psutil, re, requests, signal, sqlalchemy, sqlite3, subprocess, sys, time, traceback, warnings
from Bio import AlignIO, SeqIO
from Bio.PDB import MMCIFParser
from Bio.PDB.mmcifio import MMCIFIO
......@@ -537,7 +537,6 @@ class Chain:
self.seq_to_align = ''.join(c_seq_to_align)
self.seq = ''.join(c_seq)
class Job:
""" This class contains information about a task to run later.
......@@ -572,7 +571,6 @@ class Job:
s = f"{self.priority_}({self.nthreads}) [{self.comp_time}]\t{self.label:25}{self.func_.__name__}(" + " ".join([str(a) for a in self.args_]) + ")"
return s
class Monitor:
""" A job that simply watches the memory usage of another process.
......