Louis BECQUEY / RNANetLegacy

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Louis BECQUEY
220d1a3e 2 parents 47f8a2ba 59dc03a6

Merge branch 'master' of https://github.com/persalteas/RNAnet

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...@@ -13,9 +13,7 @@ You need to install Infernal, DSSR, and SINA before running this. ...@@ -13,9 +13,7 @@ You need to install Infernal, DSSR, and SINA before running this.
13 I moved to python3.8.1. Unfortunately, python3.6 is no longer supported, because of changes in the multiprocessing and Threading packages. Untested with Python 3.7.*. 13 I moved to python3.8.1. Unfortunately, python3.6 is no longer supported, because of changes in the multiprocessing and Threading packages. Untested with Python 3.7.*.
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15 Packages numpy, pandas, matplotlib, requests, psutil, biopython, sqlalchemy and tqdm are required. 15 Packages numpy, pandas, matplotlib, requests, psutil, biopython, sqlalchemy and tqdm are required.
16 -`python3.8 -m pip install numpy pandas matplotlib pymysql requests psutil biopython sqlalchemy tqdm` 16 +`python3.8 -m pip install numpy matplotlib pandas biopython psutil pymysql requests sqlalchemy tqdm`
17 -
18 -Before use, please set the two variables `path_to_3D_data` and `path_to_seq_data` (around line 30 of RNAnet.py) to two folders where you want to store RNA 3D structures and RNA sequences. A few gigabytes will be produced.
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20 # What it does 18 # What it does
21 The script follows these steps: 19 The script follows these steps:
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