Ludovic ISHIOMIN / IRSOM-datasets

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noncoding.fasta 294 KB
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>URS0000AB16C0_511145 Escherichia coli str. K-12 substr. MG1655 Eukaryotic large subunit ribosomal RNA
AAUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCC
CAGUAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCUGAAUCAGUGUGUGUGUUAGUGGAAGCGUCUGGAAAGGCGCGCG
AUACAGGGUGACAGCCCCGUACACAAAAAUGCACAUGCUGUGAGCUCGAUGAGUAGGGCGGGACACGUGGUAUCCUGUCU
GAAUAUGGGGGGACCAUCCUCCAAGGCUAAAUACUCCUGACUGACCGAUAGUGAACCAGUACCGUGAGGGAAAGGCGAAA
AGAACCCCGGCGAGGGGAGUGAAAAAGAACCUGAAACCGUGUACGUACAAGCAGUGGGAGCACGCUUAGGCGUGUGACUG
CGUACCUUUUGUAUAAUGGGUCAGCGACUUAUAUUCUGUAGCAAGGUUAACCGAAUAGGGGAGCCGAAGGGAAACCGAGU
CUUAACUGGGCGUUAAGUUGCAGGGUAUAGACCCGAAACCCGGUGAUCUAGCCAUGGGCAGGUUGAAGGUUGGGUAACAC
UAACUGGAGGACCGAACCGACUAAUGUUGAAAAAUUAGCGGAUGACUUGUGGCUGGGGGUGAAAGGCCAAUCAAACCGGG
AGAUAGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGUGAAUUCAUCUCCGGGGGUAGAGCACUGUUUCGGCAAG
GGGGUCAUCCCGACUUACCAACCCGAUGCAAACUGCGAAUACCGGAGAAUGUUAUCACGGGAGACACACGGCGGGUGCUA
ACGUCCGUCGUGAAGAGGGAAACAACCCAGACCGCCAGCUAAGGUCCCAAAGUCAUGGUUAAGUGGGAAACGAUGUGGGA
AGGCCCAGACAGCCAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCACUGGUCGAGUCGGCCU
GCGCGGAAGAUGUAACGGGGCUAAACCAUGCACCGAAGCUGCGGCAGCGACGCUUAUGCGUUGUUGGGUAGGGGAGCGUU
CUGUAAGCCUGCGAAGGUGUGCUGUGAGGCAUGCUGGAGGUAUCAGAAGUGCGAAUGCUGACAUAAGUAACGAUAAAGCG
GGUGAAAAGCCCGCUCGCCGGAAGACCAAGGGUUCCUGUCCAACGUUAAUCGGGGCAGGGUGAGUCGACCCCUAAGGCGA
GGCCGAAAGGCGUAGUCGAUGGGAAACAGGUUAAUAUUCCUGUACUUGGUGUUACUGCGAAGGGGGGACGGAGAAGGCUA
UGUUGGCCGGGCGACGGUUGUCCCGGUUUAAGCGUGUAGGCUGGUUUUCCAGGCAAAUCCGGAAAAUCAAGGCUGAGGCG
UGAUGACGAGGCACUACGGUGCUGAAGCAACAAAUGCCCUGCUUCCAGGAAAAGCCUCUAAGCAUCAGGUAACAUCAAAU
CGUACCCCAAACCGACACAGGUGGUCAGGUAGAGAAUACCAAGGCGCUUGAGAGAACUCGGGUGAAGGAACUAGGCAAAA
UGGUGCCGUAACUUCGGGAGAAGGCACGCUGAUAUGUAGGUGAAGCGACUUGCUCGUGGAGCUGAAAUCAGUCGAAGAUA
CCAGCUGGCUGCAACUGUUUAUUAAAAACACAGCACUGUGCAAACACGAAAGUGGACGUAUACGGUGUGACGCCUGCCCG
GUGCCGGAAGGUUAAUUGAUGGGGUUAGCGCAAGCGAAGCUCUUGAUCGAAGCCCCGGUAAACGGCGGCCGUAACUAUAA
CGGUCCUAAGGUAGCGAAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAUGGCGUAAUGAUGGCCAGGCUGUCUCCA
CCCGAGACUCAGUGAAAUUGAACUCGCUGUGAAGAUGCAGUGUACCCGCGGCAAGACGGAAAGACCCCGUGAACCUUUAC
UAUAGCUUGACACUGAACAUUGAGCCUUGAUGUGUAGGAUAGGUGGGAGGCUUAGAAGUGUGGACGCCAGUCUGCAUGGA
GCCGACCUUGAAAUACCACCCUUUAAUGUUUGAUGUUCUAACGUUGACCCGUAAUCCGGGUUGCGGACAGUGUCUGGUGG
GUAGUUUGACUGGGGCGGUCUCCUCCUAAAGAGUAACGGAGGAGCACGAAGGUUGGCUAAUCCUGGUCGGACAUCAGGAG
GUUAGUGCAAUGGCAUAAGCCAGCUUGACUGCGAGCGUGACGGCGCGAGCAGGUGCGAAAGCAGGUCAUAGUGAUCCGGU
GGUUCUGAAUGGAAGGGCCAUCGCUCAACGGAUAAAAGGUACUCCGGGGAUAACAGGCUGAUACCGCCCAAGAGUUCAUA
UCGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCACAUCCUGGGGCUGAAGUAGGUCCCCAAGGGUAUGCUGUUCGC
CAUUUAAAGUGGUACGCGAGCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCCGUGGGCGCUGGAGAACUG
AGGGGGGCUGCUCCUAGUACGAGAGGACCGGAGUGGACGCAUCACUGGUGUUCGGGUUGUCAUGCCAAUGCACUGCCCGG
UAGCUAAAUGCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCACGAAACUUGCCCCGAGAUGAGUUCUCCCUGACCCUUUA
AGGGUCCUGAAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGCGCAGCGAUGCGUUGAGCUAACCGGUA
CUAAUGAACCGUGA
>URS0000AB7F7D_511145 Escherichia coli str. K-12 substr. MG1655 Archaeal large subunit ribosomal RNA
AGGUUAAGCGACUAAGCGUACACGGUGGAUGCCCUGGCAGUCAGAGGCGAUGAAGGACGUGCUAAUCUGCGAUAAGCGUC
GGUAAGGUGAUAUGAACCGUUAUAACCGGCGAUUUCCGAAUGGGGAAACCCAGUGUGUUUCGACACACUAUCAUUAACUG
AAUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCC
CAGUAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCUGAAUCAGUAUGUGUGUUAGUGGAAGCGUCUGGAAAGGCGCGCG
AUACAGGGUGACAGCCCCGUACACAAAAAUGCACAUAUUGUGAGCUCGAUGAGUAGGGCGGGACACGUGGUAUCCUGUCU
GAAUAUGGGGGGACCAUCCUCCAAGGCUAAAUACUCCUGACUGACCGAUAGUGAACCAGUACCGUGAGGGAAAGGCGAAA
AGAACCCCGGCGAGGGGAGUGAAAAAGAACCUGAAACCGUGUACGUACAAGCAGUGGGAGCACGCUUAGGCGUGUGACUG
CGUACCUUUUGUAUAAUGGGUCAGCGACUUAUAUUCUGUAGCAAGGUUAACCGAAUAGGGGAGCCGAAGGGAAACCGAGU
CUUAACUGGGCGUUAAGUUGCAGGGUAUAGACCCGAAACCCGGUGAUCUAGCCAUGGGCAGGUUGAAGGUUGGGUAACAC
UAACUGGAGGACCGAACCGACUAAUGUUGAAAAAUUAGCGGAUGACUUGUGGCUGGGGGUGAAAGGCCAAUCAAACCGGG
AGAUAGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGUGAAUUCAUCUCCGGGGGUAGAGCACUGUUUCGGCAAG
GGGGUCAUCCCGACUUACCAACCCGAUGCAAACUGCGAAUACCGGAGAAUGUUAUCACGGGAGACACACGGCGGGUGCUA
ACGUCCGUCGUGAAGAGGGAAACAACCCAGACCGCCAGCUAAGGUCCCAAAGUCAUGGUUAAGUGGGAAACGAUGUGGGA
AGGCCCAGACAGCCAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCACUGGUCGAGUCGGCCU
GCGCGGAAGAUGUAACGGGGCUAAACCAUGCACCGAAGCUGCGGCAGCGACGCUUAUGCGUUGUUGGGUAGGGGAGCGUU
CUGUAAGCCUGCGAAGGUGUGCUGUGAGGCAUGCUGGAGGUAUCAGAAGUGCGAAUGCUGACAUAAGUAACGAUAAAGCG
GGUGAAAAGCCCGCUCGCCGGAAGACCAAGGGUUCCUGUCCAACGUUAAUCGGGGCAGGGUGAGUCGACCCCUAAGGCGA
GGCCGAAAGGCGUAGUCGAUGGGAAACAGGUUAAUAUUCCUGUACUUGGUGUUACUGCGAAGGGGGGACGGAGAAGGCUA
UGUUGGCCGGGCGACGGUUGUCCCGGUUUAAGCGUGUAGGCUGGUUUUCCAGGCAAAUCCGGAAAAUCAAGGCUGAGGCG
UGAUGACGAGGCACUACGGUGCUGAAGCAACAAAUGCCCUGCUUCCAGGAAAAGCCUCUAAGCAUCAGGUAACAUCAAAU
CGUACCCCAAACCGACACAGGUGGUCAGGUAGAGAAUACCAAGGCGCUUGAGAGAACUCGGGUGAAGGAACUAGGCAAAA
UGGUGCCGUAACUUCGGGAGAAGGCACGCUGAUAUGUAGGUGAAGCGACUUGCUCGUGGAGCUGAAAUCAGUCGAAGAUA
CCAGCUGGCUGCAACUGUUUAUUAAAAACACAGCACUGUGCAAACACGAAAGUGGACGUAUACGGUGUGACGCCUGCCCG
GUGCCGGAAGGUUAAUUGAUGGGGUCAGCGCAAGCGAAGCUCUUGAUCGAAGCCCCGGUAAACGGCGGCCGUAACUAUAA
CGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAUGGCGUAAUGAUGGCCAGGCUGUCUCCAC
CCGAGACUCAGUGAAAUUGAACUCGCUGUGAAGAUGCAGUGUACCCGCGGCAAGACGGAAAGACCCCGUGAACCUUUACU
AUAGCUUGACACUGAACAUUGAGCCUUGAUGUGUAGGAUAGGUGGGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGAG
CCGACCUUGAAAUACCACCCUUUAAUGUUUGAUGUUCUAACGUGGACCCGUGAUCCGGGUUGCGGACAGUGUCUGGUGGG
UAGUUUGACUGGGGCGGUCUCCUCCUAAAGAGUAACGGAGGAGCACGAAGGUUGGCUAAUCCUGGUCGGACAUCAGGAGG
UUAGUGCAAUGGCAUAAGCCAGCUUGACUGCGAGCGUGACGGCGCGAGCAGGUGCGAAAGCAGGUCAUAGUGAUCCGGUG
GUUCUGAAUGGAAGGGCCAUCGCUCAACGGAUAAAAGGUACUCCGGGGAUAACAGGCUGAUACCGCCCAAGAGUUCAUAU
CGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCACAUCCUGGAGCUGAAGUAGGUCCCAAGGGUAUGGCUGUUCGCC
AUUUAAAGUGGUACGCGAGCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCCGUGGGCGCUGGAGAACUGA
GGGGGGCUGCUCCUAGUACGAGAGGACCGGAGUGGACGCAUCACUGGUGUUCGGGUUGUCAUGCCAAUGGCACUGCCCGG
UAGCUAAAUGCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCACGAAACUUGCCCCGAGAUGAGUUCUCCCUGACUCCUUG
AGAGUCCUGAAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGCGCAGCGAUGCGUUGAGCUAACCGGUA
CUAAUGAACCGUGAGGCUUAACCU
>URS0000230EE1_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
CGGCACGUAGCGCAGCCUGGUAGCGCACCGUCAUGGGGUGUCGGGGGUCGGAGGUUCAAAUCCUCUCGUGCCGA
>URS000035F456_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GGCCCCUUAGCUCAGUGGUUAGAGCAGGCGACUCAUAAUCGCUUGGUCGCUGGUUCAAGUCCAGCAGGGGCCA
>URS000061DFCE_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GGUGAGGUGGCCGAGAGGCUGAAGGCGCUCCCCUGCUAAGGGAGUAUGCGGUCAAAAGCUGCAUCCGGGGUUCGAAUCCC
CGCCUCACCG
>URS000092F3F5_511145 Escherichia coli str. K-12 substr. MG1655 Archaeal small subunit ribosomal RNA
GAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAACAGCUU
GCUGUUUCGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCUGAUGGAGGGGGAUAACUACUGGAAACGG
UAGCUAAUACCGCAUAACGUCGCAAGACCAAAGAGGGGGACCCUCGGGCCUCUUGCCAUCGGAUGUGCCCAGAUGGGAUU
AGCUUGUUGGUGGGGUAACGGCUCACCAAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGAACUGA
GACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGCCGCGU
GUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUUGACGU
UACCCGCAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAAUUACU
GGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCCGGGCUCAACCUGGGAACUGCAUCUGAUACUG
GCAAGCUUGAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACCGGUGG
CGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUC
CACGCCGUAAACGAUGUCGACUUGGAGGUUGUGCCCUUGAGGCGUGGCUUCCGGAGCUAACGCGUUAAGUCGACCGCCUG
GGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAU
GCAACGCGAAGAACCUUACCUGGUCUUGACAUCCACGGAAGUUUUCAGAGAUGAGAAUGUGCCUUCGGGAACCGUGAGAC
AGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCCUUUGU
UGCCAGCGGUCCGGCCGGGAACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGGGGAUGACGUCAAGUCAUCAU
GGCCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGACCUCA
UAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCAGAAUG
CCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGUAGCUU
AACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUAACAAGGUAACCGUAGGGGAACCUGCG
GUUGGAUCACCUCCU
>URS00001160B1_511145 Escherichia coli str. K-12 substr. MG1655 MicF RNA
CGCUAUCAUCAUUAACUUUAUUUAUUACCGUCAUUCAUUUCUGAAUGUCUGUUUACCCCUAUUUCAACCGGAUGCCUCGC
AUUCGGUUUUUUUU
>URS000033A7DD_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GCGUCCGUAGCUCAGUUGGUUAGAGCACCACCUUGACAUGGUGGGGGUCGGUGGUUCGAGUCCACUCGGACGCA
>URS0000266ADF_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GCUGAUAUGGCUCAGUUGGUAGAGCGCACCCUUGGUAAGGGUGAGGUCCCCAGUUCGACUCUGGGUAUCAGCA
>URS0000022B8C_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GCUCAAGUAGUUAAAAAUGCAUUAACAUCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCGGCA
>URS00003821D9_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
CGGUGAUUGGCGCAGCCUGGUAGCGCACUUCGUUCGGGACGAAGGGGUCGGAGGUUCGAAUCCUCUAUCACCGA
>URS0000097FC8_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GGGUCGUUAGCUCAGUUGGUAGAGCAGUUGACUUUUAAUCAAUUGGUCGCAGGUUCGAAUCCUGCACGACCCA
>URS00005F9558_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GGUGAGGUGUCCGAGUGGCUGAAGGAGCACGCCUGGAAAGUGUGUAUACGGCAACGUAUCGGGGGUUCGAAUCCCCCCCU
CACCG
>URS000054897F_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GGGGCUAUAGCUCAGCUGGGAGAGCGCUUGCAUGGCAUGCAAGAGGUCAGCGGUUCGAUCCCGCUUAGCUCCA
>URS000040CF9C_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GGAGAGAUGCCGGAGCGGCUGAACGGACCGGUCUCGAAAACCGGAGUAGGGGCAACUCUACCGGGGGUUCAAAUCCCCCU
CUCUCCG
>URS00006A19BA_511145 Escherichia coli str. K-12 substr. MG1655 sok antitoxin
GGGUGCCUGAAGCUUUCCGGUUUCAGGUUUACUCUGAGGUCUGGAAAGAUGAAGCCCCAGGAGAUAUUUCUAUCAACCCU
GGGGCUGCCACUCCAAACCCGAACAAUUUGGAUGGUAGUCCCUUCUUCGCAUGGAGGCAAUAUAAACAUG
>URS0000689350_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
CGCGGGGUGGAGCAGCCUGGUAGCUCGUCGGGCUCAUAACCCGAAGAUCGUCGGUUCAAAUCCGGCCCCCGCAA
>URS00006BE6A2_511145 Escherichia coli str. K-12 substr. MG1655 sok antitoxin
GGGUGCUUGAGGCUGUCUGUCUCAGGCAUUAGCUGAACGGCAGAUAGAGAAAAGCCCCGAGUGAUAUUUUACCAUCAACC
CGAGGCCUCCUAUAUGCUGAACACAUGUAGAGUGCCUCUUACUGACCGUAAGGUCAAGGAGAAGAGAGCAAUG
>URS000072CAB6_511145 Escherichia coli str. K-12 substr. MG1655 5S ribosomal RNA
UCUGGCGGCAGUAGCGCGGUGGUCCCACCUGACCCCAUGCCGAACUCAGAAGUGAAACCGCCGUAGCGCCGAUGGUAGUG
UGGGGUCUCCCCAUGCGAGAGUAGGGAACUGCCAGAC
>URS000060D281_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
UGGGGUAUCGCCAAGCGGUAAGGCACCGGUUUUUGAUACCGGCAUUCCCUGGUUCGAAUCCAGGUACCCCAG
>URS0000566AAD_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GCCCGGAUGGUGGAAUCGGUAGACACAAGGGAUUUAAAAUCCCUCGGCGUUCGCGCUGUGCGGGUUCAAGUCCCGCUCCG
GGUA
>URS000005EC4C_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GUCCUCUUAGUUAAAUGGAUAUAACGAGCCCCUCCUAAGGGCUAAUUGCAGGUUCGAUUCCUGCAGGGGACA
>URS00006E34B0_511145 Escherichia coli str. K-12 substr. MG1655 sok antitoxin
GGGUGCUUGAGACUGUUUGUCUCAGGUAUUCACCGAAAGGCAGACAGAGAAAAGCCCCACCUGACUAUAAAUCAAAGUUU
GUACUGACCCCAAAAAGUUGGACAGUUAAACACGAGGCAUAUAGG
>URS0000382173_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GCUGAUAUAGCUCAGUUGGUAGAGCGCACCCUUGGUAAGGGUGAGGUCGGCAGUUCGAAUCUGCCUAUCAGCA
>URS00000C9206_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GCGGGAGUGGCGAAAUUGGUAGACGCACCAGAUUUAGGUUCUGGCGCCGCAAGGUGUGCGAGUUCAAGUCUCGCCUCCCG
CA
>URS00002A80E2_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GCGGGAAUAGCUCAGUUGGUAGAGCACGACCUUGCCAAGGUCGGGGUCGCGAGUUCGAGUCUCGUUUCCCGCU
>URS0000625B83_511145 Escherichia coli str. K-12 substr. MG1655 sok antitoxin
GGGUGCCUGAGACUUUCUGUUUUCAGGCUAACCGGGAAUCAGAAAGACGAAGGCCCCGACCGAUAUUUCUAUCAACCGAG
GCCAACGAAUGAACCUAGCAAUUCAGAUCUUAGCCUCUUACCCGCCAUCCGGCAAGGAGAAAGGCUAUGAAG
>URS000090EDE3_511145 Escherichia coli str. K-12 substr. MG1655 Archaeal small subunit ribosomal RNA
GAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAGCAGCUU
GCUGCUUCGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAGCUGCCUGAUGGAGGGGGAUAACUACUGGAAACGG
UAGCUAAUACCGCAUAAUGUCGCAAGACCAAAGAGGGGGACCUUCGGGCCUCUUGCCAUCGGAUGUGCCCAGAUGGGAUU
AGCUUGUUGGUGGGGUAACGGCUCACCAAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGAACUGA
GACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGCCGCGU
GUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUUGACGU
UACCCGCAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAAUUACU
GGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCCGGGCUCAACCUGGGAACUGCAUCUGAUACUG
GCAAGCUUGAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACCGGUGG
CGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUC
CACGCCGUAAACGAUGUCGACUUGGAGGUUGUGCCCUUGAGGCGUGGCUUCCGGAGCUAACGCGUUAAGUCGACCGCCUG
GGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAU
GCAACGCGAAGAACCUUACCUGGUCUUGACAUCCACGGAAGUUUUCAGAGAUGAGAAUGUGCCUUCGGGAACCGUGAGAC
AGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCCUUUGU
UGCCAGCGGUCCGGCCGGGAACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGGGGAUGACGUCAAGUCAUCAU
GGCCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGACCUCA
UAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCAGAAUG
CCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGUAGCUU
AACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUAACAAGGUAACCGUAGGGGAACCUGCG
GUUGGAUCACCUCCU
>URS0000434EAF_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GUCCCCUUCGUCUAGAGGCCCAGGACACCGCCCUUUCACGGCGGUAACAGGGGUUCGAAUCCCCUAGGGGACG
>URS000002FD0D_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GCGUUCAUAGCUCAGUUGGUUAGAGCACCACCUUGACAUGGUGGGGGUCGUUGGUUCGAGUCCAAUUGAACGCA
>URS0000092A1D_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GUGGCUAUAGCUCAGUUGGUAGAGCCCUGGAUUGUGAUUCCAGUUGUCGUGGGUUCGAAUCCCAUUAGCCACC
>URS00000CAECD_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
AGGGGCGUAGUUCAAUUGGUAGAGCACCGGUCUCCAAAACCGGGUGUUGGGAGUUCGAGUCUCUCCGCCCCUG
>URS00002A51CF_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GCGGGCAUCGUAUAAUGGCUAUUACCUCAGCCUUCCAAGCUGAUGAUGCGGGUUCGAUUCCCGCUGCCCGCU
>URS0000AB70E0_511145 Escherichia coli str. K-12 substr. MG1655 Eukaryotic large subunit ribosomal RNA
AAUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCC
CAGUAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCUGAAUCAGUGUGUGUGUUAGUGGAAGCGUCUGGAAAGGCGCGCG
AUACAGGGUGACAGCCCCGUACACAAAAAUGCACAUGCUGUGAGCUCGAUGAGUAGGGCGGGACACGUGGUAUCCUGUCU
GAAUAUGGGGGGACCAUCCUCCAAGGCUAAAUACUCCUGACUGACCGAUAGUGAACCAGUACCGUGAGGGAAAGGCGAAA
AGAACCCCGGCGAGGGGAGUGAAAAAGAACCUGAAACCGUGUACGUACAAGCAGUGGGAGCACGCUUAGGCGUGUGACUG
CGUACCUUUUGUAUAAUGGGUCAGCGACUUAUAUUCUGUAGCAAGGUUAACCGAAUAGGGGAGCCGAAGGGAAACCGAGU
CUUAACUGGGCGUUAAGUUGCAGGGUAUAGACCCGAAACCCGGUGAUCUAGCCAUGGGCAGGUUGAAGGUUGGGUAACAC
UAACUGGAGGACCGAACCGACUAAUGUUGAAAAAUUAGCGGAUGACUUGUGGCUGGGGGUGAAAGGCCAAUCAAACCGGG
AGAUAGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGUGAAUUCAUCUCCGGGGGUAGAGCACUGUUUCGGCAAG
GGGGUCAUCCCGACUUACCAACCCGAUGCAAACUGCGAAUACCGGAGAAUGUUAUCACGGGAGACACACGGCGGGUGCUA
ACGUCCGUCGUGAAGAGGGAAACAACCCAGACCGCCAGCUAAGGUCCCAAAGUCAUGGUUAAGUGGGAAACGAUGUGGGA
AGGCCCAGACAGCCAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCACUGGUCGAGUCGGCCU
GCGCGGAAGAUGUAACGGGGCUAAACCAUGCACCGAAGCUGCGGCAGCGACGCUUAUGCGUUGUUGGGUAGGGGAGCGUU
CUGUAAGCCUGCGAAGGUGUGCUGUGAGGCAUGCUGGAGGUAUCAGAAGUGCGAAUGCUGACAUAAGUAACGAUAAAGCG
GGUGAAAAGCCCGCUCGCCGGAAGACCAAGGGUUCCUGUCCAACGUUAAUCGGGGCAGGGUGAGUCGACCCCUAAGGCGA
GGCCGAAAGGCGUAGUCGAUGGGAAACAGGUUAAUAUUCCUGUACUUGGUGUUACUGCGAAGGGGGGACGGAGAAGGCUA
UGUUGGCCGGGCGACGGUUGUCCCGGUUUAAGCGUGUAGGCUGGUUUUCCAGGCAAAUCCGGAAAAUCAAGGCUGAGGCG
UGAUGACGAGGCACUACGGUGCUGAAGCAACAAAUGCCCUGCUUCCAGGAAAAGCCUCUAAGCAUCAGGUAACAUCAAAU
CGUACCCCAAACCGACACAGGUGGUCAGGUAGAGAAUACCAAGGCGCUUGAGAGAACUCGGGUGAAGGAACUAGGCAAAA
UGGUGCCGUAACUUCGGGAGAAGGCACGCUGAUAUGUAGGUGAGGUCCCUCGCGGAUGGAGCUGAAAUCAGUCGAAGAUA
CCAGCUGGCUGCAACUGUUUAUUAAAAACACAGCACUGUGCAAACACGAAAGUGGACGUAUACGGUGUGACGCCUGCCCG
GUGCCGGAAGGUUAAUUGAUGGGGUUAGCGCAAGCGAAGCUCUUGAUCGAAGCCCCGGUAAACGGCGGCCGUAACUAUAA
CGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAUGGCGUAAUGAUGGCCAGGCUGUCUCCAC
CCGAGACUCAGUGAAAUUGAACUCGCUGUGAAGAUGCAGUGUACCCGCGGCAAGACGGAAAGACCCCGUGAACCUUUACU
AUAGCUUGACACUGAACAUUGAGCCUUGAUGUGUAGGAUAGGUGGGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGAG
CCGACCUUGAAAUACCACCCUUUAAUGUUUGAUGUUCUAACGUUGACCCGUAAUCCGGGUUGCGGACAGUGUCUGGUGGG
UAGUUUGACUGGGGCGGUCUCCUCCUAAAGAGUAACGGAGGAGCACGAAGGUUGGCUAAUCCUGGUCGGACAUCAGGAGG
UUAGUGCAAUGGCAUAAGCCAGCUUGACUGCGAGCGUGACGGCGCGAGCAGGUGCGAAAGCAGGUCAUAGUGAUCCGGUG
GUUCUGAAUGGAAGGGCCAUCGCUCAACGGAUAAAAGGUACUCCGGGGAUAACAGGCUGAUACCGCCCAAGAGUUCAUAU
CGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCACAUCCUGGGGCUGAAGUAGGUCCCAAGGGUAUGGCUGUUCGCC
AUUUAAAGUGGUACGCGAGCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCCGUGGGCGCUGGAGAACUGA
GGGGGGCUGCUCCUAGUACGAGAGGACCGGAGUGGACGCAUCACUGGUGUUCGGGUUGUCAUGCCAAUGGCACUGCCCGG
UAGCUAAAUGCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCACGAAACUUGCCCCGAGAUGAGUUCUCCCUGACCCUUUA
AGGGUCCUGAAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGCGCAGCGAUGCGUUGAGCUAACCGGUA
CUAAUGAACCGUGA
>URS000012CA7F_511145 Escherichia coli str. K-12 substr. MG1655 RyhB RNA
GAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUUUUUU
>URS00001A3D5B_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GGCCCUUUAGCUCAGUGGUUAGAGCAGGCGACUCAUAAUCGCUUGGUCGCUGGUUCAAGUCCAGCAAGGGCCA
>URS0000AB7A1D_511145 Escherichia coli str. K-12 substr. MG1655 Archaeal large subunit ribosomal RNA
AGGUUAAGCGACUAAGCGUACACGGUGGAUGCCCUGGCAGUCAGAGGCGAUGAAGGACGUGCUAAUCUGCGAUAAGCGUC
GGUAAGGUGAUAUGAACCGUUAUAACCGGCGAUUUCCGAAUGGGGAAACCCAGUGUGUUUCGACACACUAUCAUUAACUG
AAUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCC
CAGUAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCUGAAUCAGUGUGUGUGUUAGUGGAAGCGUCUGGAAAGGCGCGCG
AUACAGGGUGACAGCCCCGUACACAAAAAUGCACAUGCUGUGAGCUCGAUGAGUAGGGCGGGACACGUGGUAUCCUGUCU
GAAUAUGGGGGGACCAUCCUCCAAGGCUAAAUACUCCUGACUGACCGAUAGUGAACCAGUACCGUGAGGGAAAGGCGAAA
AGAACCCCGGCGAGGGGAGUGAAAAAGAACCUGAAACCGUGUACGUACAAGCAGUGGGAGCAUGCUUAGGCGUGUGACUG
CGUACCUUUUGUAUAAUGGGUCAGCGACUUAUAUUCUGUAGCAAGGUUAACCGAAUAGGGGAGCCGAAGGGAAACCGAGU
CUUAACUGGGCGUUAAGUUGCAGGGUAUAGACCCGAAACCCGGUGAUCUAGCCAUGGGCAGGUUGAAGGUUGGGUAACAC
UAACUGGAGGACCGAACCGACUAAUGUUGAAAAAUUAGCGGAUGACUUGUGGCUGGGGGUGAAAGGCCAAUCAAACCGGG
AGAUAGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGUGAACUCAUCUCCGGGGGUAGAGCACUGUUUCGGCAAG
GGGGUCAUCCCGACUUACCAACCCGAUGCAAACUGCGAAUACCGGAGAAUGUUAUCACGGGAGACACACGGCGGGUGCUA
ACGUCCGUCGUGAAGAGGGAAACAACCCAGACCGCCAGCUAAGGUCCCAAAGUCAUGGUUAAGUGGGAAACGAUGUGGGA
AGGCCCAGACAGCCAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCACUGGUCGAGUCGGCCU
GCGCGGAAGAUGUAACGGGGCUAAACCAUGCACCGAAGCUGCGGCAGCGACGCUUAUGCGUUGUUGGGUAGGGGAGCGUU
CUGUAAGCCUGUGAAGGUGUACUGUGAGGUAUGCUGGAGGUAUCAGAAGUGCGAAUGCUGACAUAAGUAACGAUAAAGCG
GGUGAAAAGCCCGCUCGCCGGAAGACCAAGGGUUCCUGUCCAACGUUAAUCGGGGCAGGGUGAGUCGACCCCUAAGGCGA
GGCCGAAAGGCGUAGUCGAUGGGAAACAGGUUAAUAUUCCUGUACUUGGUGUUACUGCGAAGGGGGGACGGAGAAGGCUA
UGUUGGCCGGGCGACGGUUGUCCCGGUUUAAGCGUGUAGGCUGGUUUUCCAGGCAAAUCCGGAAAAUCAAGGCUGAGGCG
UGAUGACGAGGCACUACGGUGCUGAAGCAACAAAUGCCCUGCUUCCAGGAAAAGCCUCUAAGCAUCAGGUAACAUCAAAU
CGUACCCCAAACCGACACAGGUGGUCAGGUAGAGAAUACCAAGGCGCUUGAGAGAACUCGGGUGAAGGAACUAGGCAAAA
UGGUGCCGUAACUUCGGGAGAAGGCACGCUGAUAUGUAGGUGAAGCGACUUGCUCGUGGAGCUGAAAUCAGUCGAAGAUA
CCAGCUGGCUGCAACUGUUUAUUAAAAACACAGCACUGUGCAAACACGAAAGUGGACGUAUACGGUGUGACGCCUGCCCG
GUGCCGGAAGGUUAAUUGAUGGGGUUAGCGCAAGCGAAGCUCUUGAUCGAAGCCCCGGUAAACGGCGGCCGUAACUAUAA
CGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAUGGCGUAAUGAUGGCCAGGCUGUCUCCAC
CCGAGACUCAGUGAAAUUGAACUCGCUGUGAAGAUGCAGUGUACCCGCGGCAAGACGGAAAGACCCCGUGAACCUUUACU
AUAGCUUGACACUGAACAUUGAGCCUUGAUGUGUAGGAUAGGUGGGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGAG
CCGACCUUGAAAUACCACCCUUUAAUGUUUGAUGUUCUAACGUUGACCCGUAAUCCGGGUUGCGGACAGUGUCUGGUGGG
UAGUUUGACUGGGGCGGUCUCCUCCUAAAGAGUAACGGAGGAGCACGAAGGUUGGCUAAUCCUGGUCGGACAUCAGGAGG
UUAGUGCAAUGGCAUAAGCCAGCUUGACUGCGAGCGUGACGGCGCGAGCAGGUGCGAAAGCAGGUCAUAGUGAUCCGGUG
GUUCUGAAUGGAAGGGCCAUCGCUCAACGGAUAAAAGGUACUCCGGGGAUAACAGGCUGAUACCGCCCAAGAGUUCAUAU
CGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCACAUCCUGGGGCUGAAGUAGGUCCCAAGGGUAUGGCUGUUCGCC
AUUUAAAGUGGUACGCGAGCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCCGUGGGCGCUGGAGAACUGA
GGGGGGCUGCUCCUAGUACGAGAGGACCGGAGUGGACGCAUCACUGGUGUUCGGGUUGUCAUGCCAAUGGCACUGCCCGG
UAGCUAAAUGCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCACGAAACUUGCCCCGAGAUGAGUUCUCCCUGACUCCUUG
AGAGUCCUGAAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGCGCAGCGAUGCGUUGAGCUAACCGGUA
CUAAUGAACCGUGAGGCUUAACCU
>URS0000AB96DC_511145 Escherichia coli str. K-12 substr. MG1655 Archaeal large subunit ribosomal RNA
AGGUUAAGCGACUAAGCGUACACGGUGGAUGCCCUGGCAGUCAGAGGCGAUGAAGGACGUGCUAAUCUGCGAUAAGCGUC
GGUAAGGUGAUAUGAACCGUUAUAACCGGCGAUUUCCGAAUGGGGAAACCCAGUGUGUUUCGACACACUAUCAUUAACUG
AAUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCC
CAGUAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCUGAAUCAGUGUGUGUGUUAGUGGAAGCGUCUGGAAAGGCGUGCG
AUACAGGGUGACAGCCCCGUACACAAAAAUGCACAUGCUGUGAGCUCGAUGAGUAGGGCGGGACACGUGGUAUCCUGUCU
GAAUAUGGGGGGACCAUCCUCCAAGGCUAAAUACUCCUGACUGACCGAUAGUGAACCAGUACCGUGAGGGAAAGGCGAAA
AGAACCCCGGCGAGGGGAGUGAAAAAGAACCUGAAACCGUGUACGUACAAGCAGUGGGAGCACGCUUAGGCGUGUGACUG
CGUACCUUUUGUAUAAUGGGUCAGCGACUUAUAUUCUGUAGCAAGGUUAACCGAAUAGGGGAGCCGAAGGGAAACCGAGU
CUUAACUGGGCGUUAAGUUGCAGGGUAUAGACCCGAAACCCGGUGAUCUAGCCAUGGGCAGGUUGAAGGUUGGGUAACAC
UAACUGGAGGACCGAACCGACUAAUGUUGAAAAAUUAGCGGAUGACUUGUGGCUGGGGGUGAAAGGCCAAUCAAACCGGG
AGAUAGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGUGAAUUCAUCUCCGGGGGUAGAGCACUGUUUCGGCAAG
GGGGUCAUCCCGACUUACCAACCCGAUGCAAACUGCGAAUACCGGAGAAUGUUAUCACGGGAGACACACGGCGGGUGCUA
ACGUCCGUCGUGAAGAGGGAAACAACCCAGACCGCCAGCUAAGGUCCCAAAGUCAUGGUUAAGUGGGAAACGAUGUGGGA
AGGCCCAGACAGCCAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCACUGGUCGAGUCGGCCU
GCGCGGAAGAUGUAACGGGGCUAAACCAUGCACCGAAGCUGCGGCAGCGACACUAUGUGUUGUUGGGUAGGGGAGCGUUC
UGUAAGCCUGUGAAGGUGUGCUGUGAGGCAUGCUGGAGGUAUCAGAAGUGCGAAUGCUGACAUAAGUAACGAUAAAGCGG
GUGAAAAGCCCGCUCGCCGGAAGACCAAGGGUUCCUGUCCAACGUUAAUCGGGGCAGGGUGAGUCGACCCCUAAGGCGAG
GCCGAAAGGCGUAGUCGAUGGGAAACAGGUUAAUAUUCCUGUACUUGGUGUUACUGCGAAGGGGGGACGGAGAAGGCUAU
GUUGGCCGGGCGACGGUUGUCCCGGUUUAAGCGUGUAGGCUGGUUUUCCAGGCAAAUCCGGAAAAUCAAGGCUGAGGCGU
GAUGACGAGGCACUACGGUGCUGAAGCAACAAAUGCCCUGCUUCCAGGAAAAGCCUCUAAGCAUCAGGUAACAUCAAAUC
GUACCCCAAACCGACACAGGUGGUCAGGUAGAGAAUACCAAGGCGCUUGAGAGAACUCGGGUGAAGGAACUAGGCAAAAU
GGUGCCGUAACUUCGGGAGAAGGCACGCUGAUAUGUAGGUGAAGCGACUUGCUCGUGGAGCUGAAAUCAGUCGAAGAUAC
CAGCUGGCUGCAACUGUUUAUUAAAAACACAGCACUGUGCAAACACGAAAGUGGACGUAUACGGUGUGACGCCUGCCCGG
UGCCGGAAGGUUAAUUGAUGGGGUUAGCCGCAAGGCGAAGCUCUUGAUCGAAGCCCCGGUAAACGGCGGCCGUAACUAUA
ACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAUGGCGUAAUGAUGGCCAGGCUGUCUCCA
CCCGAGACUCAGUGAAAUUGAACUCGCUGUGAAGAUGCAGUGUACCCGCGGCAAGACGGAAAGACCCCGUGAACCUUUAC
UAUAGCUUGACACUGAACAUUGAGCCUUGAUGUGUAGGAUAGGUGGGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGA
GCCGACCUUGAAAUACCACCCUUUAAUGUUUGAUGUUCUAACGUUGACCCGUAAUCCGGGUUGCGGACAGUGUCUGGUGG
GUAGUUUGACUGGGGCGGUCUCCUCCUAAAGAGUAACGGAGGAGCACGAAGGUUGGCUAAUCCUGGUCGGACAUCAGGAG
GUUAGUGCAAUGGCAUAAGCCAGCUUGACUGCGAGCGUGACGGCGCGAGCAGGUGCGAAAGCAGGUCAUAGUGAUCCGGU
GGUUCUGAAUGGAAGGGCCAUCGCUCAACGGAUAAAAGGUACUCCGGGGAUAACAGGCUGAUACCGCCCAAGAGUUCAUA
UCGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCACAUCCUGGGGCUGAAGUAGGUCCCAAGGGUAUGGCUGUUCGC
CAUUUAAAGUGGUACGCGAGCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCCGUGGGCGCUGGAGAACUG
AGGGGGGCUGCUCCUAGUACGAGAGGACCGGAGUGGACGCAUCACUGGUGUUCGGGUUGUCAUGCCAAUGGCACUGCCCG
GUAGCUAAAUGCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCACGAAACUUGCCCCGAGAUGAGUUCUCCCUGACUCCUU
GAGAGUCCUGAAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGCGCAGCGAUGCGUUGAGCUAACCGGU
ACUAAUGAACCGUGAGGCUUAACCU
>URS00001F9150_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GCGCCCGUAGCUCAGCUGGAUAGAGCGCUGCCCUCCGGAGGCAGAGGUCUCAGGUUCGAAUCCUGUCGGGCGCG
>URS000015F9F0_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
AGGCUUGUAGCUCAGGUGGUUAGAGCGCACCCCUGAUAAGGGUGAGGUCGGUGGUUCAAGUCCACUCAGGCCUA
>URS0000171184_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GGGUGAUUAGCUCAGCUGGGAGAGCACCUCCCUUACAAGGAGGGGGUCGGCGGUUCGAUCCCGUCAUCACCCA
>URS000035465A_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GCCCGGAUAGCUCAGUCGGUAGAGCAGGGGAUUGAAAAUCCCCGUGUCCUUGGUUCGAUUCCGAGUCCGGGCA
>URS00000FC91C_511145 Escherichia coli str. K-12 substr. MG1655 DicF RNA
UUCUGGUGACGUUUGGCGGUAUCAGUUUUACUCCGUGACUGCUCUGCCGCCC
>URS00001C31F3_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GCCGAGGUGGUGGAAUUGGUAGACACGCUACCUUGAGGUGGUAGUGCCCAAUAGGGCUUACGGGUUCAAGUCCCGUCCUC
GGUA
>URS0000ABB6AE_511145 Escherichia coli str. K-12 substr. MG1655 Archaeal large subunit ribosomal RNA
AGGUUAAGCGACUAAGCGUACACGGUGGAUGCCCUGGCAGUCAGAGGCGAUGAAGGACGUGCUAAUCUGCGAUAAGCGUC
GGUAAGGUGAUAUGAACCGUUAUAACCGGCGAUUUCCGAAUGGGGAAACCCAGUGUGUUUCGACACACUAUCAUUAACUG
AAUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCC
CAGUAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCUGAAUCAGUGUGUGUGUUAGUGGAAGCGUCUGGAAAGGCGCGCG
AUACAGGGUGACAGCCCCGUACACAAAAAUGCACAUGCUGUGAGCUCGAUGAGUAGGGCGGGACACGUGGUAUCCUGUCU
GAAUAUGGGGGGACCAUCCUCCAAGGCUAAAUACUCCUGACUGACCGAUAGUGAACCAGUACCGUGAGGGAAAGGCGAAA
AGAACCCCGGCGAGGGGAGUGAAAAAGAACCUGAAACCGUGUACGUACAAGCAGUGGGAGCACGCUUAGGCGUGUGACUG
CGUACCUUUUGUAUAAUGGGUCAGCGACUUAUAUUCUGUAGCAAGGUUAACCGAAUAGGGGAGCCGAAGGGAAACCGAGU
CUUAACUGGGCGUUAAGUUGCAGGGUAUAGACCCGAAACCCGGUGAUCUAGCCAUGGGCAGGUUGAAGGUUGGGUAACAC
UAACUGGAGGACCGAACCGACUAAUGUUGAAAAAUUAGCGGAUGACUUGUGGCUGGGGGUGAAAGGCCAAUCAAACCGGG
AGAUAGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGUGAAUUCAUCUCCGGGGGUAGAGCACUGUUUCGGCAAG
GGGGUCAUCCCGACUUACCAACCCGAUGCAAACUGCGAAUACCGGAGAAUGUUAUCACGGGAGACACACGGCGGGUGCUA
ACGUCCGUCGUGAAGAGGGAAACAACCCAGACCGCCAGCUAAGGUCCCAAAGUCAUGGUUAAGUGGGAAACGAUGUGGGA
AGGCCCAGACAGCCAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCACUGGUCGAGUCGGCCU
GCGCGGAAGAUGUAACGGGGCUAAACCAUGCACCGAAGCUGCGGCAGCGACGCUUAUGCGUUGUUGGGUAGGGGAGCGUU
CUGUAAGCCUGCGAAGGUGUGCUGUGAGGCAUGCUGGAGGUAUCAGAAGUGCGAAUGCUGACAUAAGUAACGAUAAAGCG
GGUGAAAAGCCCGCUCGCCGGAAGACCAAGGGUUCCUGUCCAACGUUAAUCGGGGCAGGGUGAGUCGACCCCUAAGGCGA
GGCCGAAAGGCGUAGUCGAUGGGAAACAGGUUAAUAUUCCUGUACUUGGUGUUACUGCGAAGGGGGGACGGAGAAGGCUA
UGUUGGCCGGGCGACGGUUGUCCCGGUUUAAGCGUGUAGGCUGGUUUUCCAGGCAAAUCCGGAAAAUCAAGGCUGAGGCG
UGAUGACGAGGCACUACGGUGCUGAAGCAACAAAUGCCCUGCUUCCAGGAAAAGCCUCUAAGCAUCAGGUAACAUCAAAU
CGUACCCCAAACCGACACAGGUGGUCAGGUAGAGAAUACCAAGGCGCUUGAGAGAACUCGGGUGAAGGAACUAGGCAAAA
UGGUGCCGUAACUUCGGGAGAAGGCACGCUGAUAUGUAGGUGAGGUCCCUCGCGGAUGGAGCUGAAAUCAGUCGAAGAUA
CCAGCUGGCUGCAACUGUUUAUUAAAAACACAGCACUGUGCAAACACGAAAGUGGACGUAUACGGUGUGACGCCUGCCCG
GUGCCGGAAGGUUAAUUGAUGGGGUUAGCGCAAGCGAAGCUCUUGAUCGAAGCCCCGGUAAACGGCGGCCGUAACUAUAA
CGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAUGGCGUAAUGAUGGCCAGGCUGUCUCCAC
CCGAGACUCAGUGAAAUUGAACUCGCUGUGAAGAUGCAGUGUACCCGCGGCAAGACGGAAAGACCCCGUGAACCUUUACU
AUAGCUUGACACUGAACAUUGAGCCUUGAUGUGUAGGAUAGGUGGGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGAG
CCGACCUUGAAAUACCACCCUUUAAUGUUUGAUGUUCUAACGUUGACCCGUAAUCCGGGUUGCGGACAGUGUCUGGUGGG
UAGUUUGACUGGGGCGGUCUCCUCCUAAAGAGUAACGGAGGAGCACGAAGGUUGGCUAAUCCUGGUCGGACAUCAGGAGG
UUAGUGCAAUGGCAUAAGCCAGCUUGACUGCGAGCGUGACGGCGCGAGCAGGUGCGAAAGCAGGUCAUAGUGAUCCGGUG
GUUCUGAAUGGAAGGGCCAUCGCUCAACGGAUAAAAGGUACUCCGGGGAUAACAGGCUGAUACCGCCCAAGAGUUCAUAU
CGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCACAUCCUGGGGCUGAAGUAGGUCCCAAGGGUAUGGCUGUUCGCC
AUUUAAAGUGGUACGCGAGCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCCGUGGGCGCUGGAGAACUGA
GGGGGGCUGCUCCUAGUACGAGAGGACCGGAGUGGACGCAUCACUGGUGUUCGGGUUGUCAUGCCAAUGGCACUGCCCGG
UAGCUAAAUGCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCACGAAACUUGCCCCGAGAUGAGUUCUCCCUGACUCCUUG
AGAGUCCUGAAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGCGCAGCGAUGCGUUGAGCUAACCGGUA
CUAAUGAACCGUGAGGCUUAACCU
>URS0000220D16_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GGAAGUGUGGCCGAGCGGUUGAAGGCACCGGUCUUGAAAACCGGCGACCCGAAAGGGUUCCAGAGUUCGAAUCUCUGCGC
UUCCG
>URS000000D27B_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GCCGACUUAGCUCAGUAGGUAGAGCAACUGACUUGUAAUCAGUAGGUCACCAGUUCGAUUCCGGUAGUCGGCA
>URS000039990D_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GGCGCGUUAACAAAGCGGUUAUGUAGCGGAUUGCAAAUCCGUCUAGUCCGGUUCGACUCCGGAACGCGCCU
>URS00000672E8_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GCGGGCGUAGUUCAAUGGUAGAACGAGAGCUUCCCAAGCUCUAUACGAGGGUUCGAUUCCCUUCGCCCGCU
>URS00006D59D3_511145 Escherichia coli str. K-12 substr. MG1655 rdlD antitoxin
GUCUGGUUUCAAGAUUAGCCCCCGUUUUGUUGUCAGGUUUUACCUCUCAACGUGCGGGGGUUUUCU
>URS000048E3DD_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
UGGGGUAUCGCCAAGCGGUAAGGCACCGGAUUCUGAUUCCGGCAUUCCGAGGUUCGAAUCCUCGUACCCCAG
>URS000009C1E2_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GCCGAAGUGGCGAAAUCGGUAGACGCAGUUGAUUCAAAAUCAACCGUAGAAAUACGUGCCGGUUCGAGUCCGGCCUUCGG
CA
>URS0000619CBC_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GCGAAGGUGGCGGAAUUGGUAGACGCGCUAGCUUCAGGUGUUAGUGUCCUUACGGACGUGGGGGUUCAAGUCCCCCCCCU
CGCA
>URS00003B7AB3_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GGUGGGGUUCCCGAGCGGCCAAAGGGAGCAGACUGUAAAUCUGCCGUCACAGACUUCGAAGGUUCGAAUCCUUCCCCCAC
CA
>URS000034CDF1_511145 Escherichia coli str. K-12 substr. MG1655 Bacterial antisense RNA HPnc0260
UGUAACAAAGUUGCCAUAGCGAUUCUCCUUCUGAUAACGCAUACGAAGACAGUGUAAAUCUUUUAACGUAUUGGAUACAG
AGAAGAAACAGAGGGAAAAAGGAGAAGACCAGAUUAAGAAAAUCUGGUGCGUCCGAGUGGACUCGAACCACCGACCCCCA
CCA
>URS00005A30CB_511145 Escherichia coli str. K-12 substr. MG1655 Selenocysteine transfer RNA
GGAAGAUCGUCGUCUCCGGUGAGGCGGCUGGACUUCAAAUCCAGUUGGGGCCGCCAGCGGUCCCGGGCAGGUUCGACUCC
UGUGAUCUUCC
>URS000041E8EC_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
CGCGGGGUGGAGCAGCCUGGUAGCUCGUCGGGCUCAUAACCCGAAGGUCGUCGGUUCAAAUCCGGCCCCCGCAA
>URS0000457934_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GCGCCCUUAGCUCAGUUGGAUAGAGCAACGACCUUCUAAGUCGUGGGCCGCAGGUUCGAAUCCUGCAGGGCGCG
>URS0000425B5A_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
UCCUCUGUAGUUCAGUCGGUAGAACGGCGGACUGUUAAUCCGUAUGUCACUGGUUCGAGUCCAGUCAGAGGAG
>URS000057DE4D_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GGUGGGGUUCCCGAGCGGCCAAAGGGAGCAGACUGUAAAUCUGCCGUCAUCGACUUCGAAGGUUCGAAUCCUUCCCCCAC
CA
>URS0000663AD5_511145 Escherichia coli str. K-12 substr. MG1655 rdlD antitoxin
GUUCUGGUUCAAGAUUAGCCCCCGUUCUGUUGUCAGGUUGUACCUCUCAACGUGCGGGGGUUUUCU
>URS00006A9175_511145 Escherichia coli str. K-12 substr. MG1655 sok antitoxin
GGGUGCUUGAGGCUGUCUGGCGUUAAGCAUUCGCGAGGUUCCAGAUGGACAAAAGCCCCAGGCGAUAUUUCUAUCAACCU
GAGGCCAGCGUUCGAACCCAAACAAUUCGAAUGUUAGUCUCUUCUUUGCAGGGAGGCAAGACAUGUGUAUAUCACU
>URS0000422428_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GGCUACGUAGCUCAGUUGGUUAGAGCACAUCACUCAUAAUGAUGGGGUCACAGGUUCGAAUCCCGUCGUAGCCA
>URS00005A1717_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GGGGCUAUAGCUCAGCUGGGAGAGCGCCUGCUUUGCACGCAGGAGGUCUGCGGUUCGAUCCCGCAUAGCUCCA
>URS00003ABDF1_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GGAGCGGUAGUUCAGUCGGUUAGAAUACCUGCCUGUCACGCAGGGGGUCGCGGGUUCGAGUCCCGUCCGUUCCG
>URS00005E0705_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GCAUCCGUAGCUCAGCUGGAUAGAGUACUCGGCUACGAACCGAGCGGUCGGAGGUUCGAAUCCUCCCGGAUGCA
>URS00000773A8_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GCCGAUAUAGCUCAGUUGGUAGAGCAGCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCGGCA
>URS00003BE008_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
CGGCGAGUAGCGCAGCUUGGUAGCGCAACUGGUUUGGGACCAGUGGGUCGGAGGUUCGAAUCCUCUCUCGCCGA
>URS00003A2B7A_511145 Escherichia coli str. K-12 substr. MG1655 tRNA
GCGAAGGUGGCGGAAUUGGUAGACGCGCUAGCUUCAGGUGUUAGUGUUCUUACGGACGUGGGGGUUCAAGUCCCCCCCCU
CGCA
>URS0000AB3580_511145 Escherichia coli str. K-12 substr. MG1655 Archaeal large subunit ribosomal RNA
AGGUUAAGCGACUAAGCGUACACGGUGGAUGCCCUGGCAGUCAGAGGCGAUGAAGGACGUGCUAAUCUGCGAUAAGCGUC
GGUAAGGUGAUAUGAACCGUUAUAACCGGCGAUUUCCGAAUGGGGAAACCCAGUGUGUUUCGACACACUAUCAUUAACUG
AAUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCC
CAGUAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCUGAAUCAGUGUGUGUGUUAGUGGAAGCGUCUGGAAAGGCGCGCG
AUACAGGGUGACAGCCCCGUACACAAAAAUGCACAUGCUGUGAGCUCGAUGAGUAGGGCGGGACACGUGGUAUCCUGUCU
GAAUAUGGGGGGACCAUCCUCCAAGGCUAAAUACUCCUGACUGACCGAUAGUGAACCAGUACCGUGAGGGAAAGGCGAAA
AGAACCCCGGCGAGGGGAGUGAAAAAGAACCUGAAACCGUGUACGUACAAGCAGUGGGAGCACGCUUAGGCGUGUGACUG
CGUACCUUUUGUAUAAUGGGUCAGCGACUUAUAUUCUGUAGCAAGGUUAACCGAAUAGGGGAGCCGAAGGGAAACCGAGU
CUUAACUGGGCGUUAAGUUGCAGGGUAUAGACCCGAAACCCGGUGAUCUAGCCAUGGGCAGGUUGAAGGUUGGGUAACAC
UAACUGGAGGACCGAACCGACUAAUGUUGAAAAAUUAGCGGAUGACUUGUGGCUGGGGGUGAAAGGCCAAUCAAACCGGG
AGAUAGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGUGAAUUCAUCUCCGGGGGUAGAGCACUGUUUCGGCAAG
GGGGUCAUCCCGACUUACCAACCCGAUGCAAACUGCGAAUACCGGAGAAUGUUAUCACGGGAGACACACGGCGGGUGCUA
ACGUCCGUCGUGAAGAGGGAAACAACCCAGACCGCCAGCUAAGGUCCCAAAGUCAUGGUUAAGUGGGAAACGAUGUGGGA
AGGCCCAGACAGCCAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCACUGGUCGAGUCGGCCU
GCGCGGAAGAUGUAACGGGGCUAAACCAUGCACCGAAGCUGCGGCAGCGACGCUUAUGCGUUGUUGGGUAGGGGAGCGUU
CUGUAAGCCUGCGAAGGUGUGCUGUGAGGCAUGCUGGAGGUAUCAGAAGUGCGAAUGCUGACAUAAGUAACGAUAAAGCG
GGUGAAAAGCCCGCUCGCCGGAAGACCAAGGGUUCCUGUCCAACGUUAAUCGGGGCAGGGUGAGUCGACCCCUAAGGCGA
GGCCGAAAGGCGUAGUCGAUGGGAAACAGGUUAAUAUUCCUGUACUUGGUGUUACUGCGAAGGGGGGACGGAGAAGGCUA
UGUUGGCCGGGCGACGGUUGUCCCGGUUUAAGCGUGUAGGCUGGUUUUCCAGGCAAAUCCGGAAAAUCAAGGCUGAGGCG
UGAUGACGAGGCACUACGGUGCUGAAGCAACAAAUGCCCUGCUUCCAGGAAAAGCCUCUAAGCAUCAGGUAACAUCAAAU
CGUACCCCAAACCGACACAGGUGGUCAGGUAGAGAAUACCAAGGCGCUUGAGAGAACUCGGGUGAAGGAACUAGGCAAAA
UGGUGCCGUAACUUCGGGAGAAGGCACGCUGAUAUGUAGGUGAGGUCCCUCGCGGAUGGAGCUGAAAUCAGUCGAAGAUA
CCAGCUGGCUGCAACUGUUUAUUAAAAACACAGCACUGUGCAAACACGAAAGUGGACGUAUACGGUGUGACGCCUGCCCG
GUGCCGGAAGGUUAAUUGAUGGGGUUAGCGCAAGCGAAGCUCUUGAUCGAAGCCCCGGUAAACGGCGGCCGUAACUAUAA
CGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAUGGCGUAAUGAUGGCCAGGCUGUCUCCAC
CCGAGACUCAGUGAAAUUGAACUCGCUGUGAAGAUGCAGUGUACCCGCGGCAAGACGGAAAGACCCCGUGAACCUUUACU
AUAGCUUGACACUGAACAUUGAGCCUUGAUGUGUAGGAUAGGUGGGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGAG
CCGACCUUGAAAUACCACCCUUUAAUGUUUGAUGUUCUAACGUUGACCCGUAAUCCGGGUUGCGGACAGUGUCUGGUGGG
UAGUUUGACUGGGGCGGUCUCCUCCUAAAGAGUAACGGAGGAGCACGAAGGUUGGCUAAUCCUGGUCGGACAUCAGGAGG
UUAGUGCAAUGGCAUAAGCCAGCUUGACUGCGAGCGUGACGGCGCGAGCAGGUGCGAAAGCAGGUCAUAGUGAUCCGGUG
GUUCUGAAUGGAAGGGCCAUCGCUCAACGGAUAAAAGGUACUCCGGGGAUAACAGGCUGAUACCGCCCAAGAGUUCAUAU
CGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCACAUCCUGGGGCUGAAGUAGGUCCCAAGGGUAUGGCUGUUCGCC
AUUUAAAGUGGUACGCGAGCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCCGUGGGCGCUGGAGAACUGA
GGGGGGCUGCUCCUAGUACGAGAGGACCGGAGUGGACGCAUCACUGGUGUUCGGGUUGUCAUGCCAAUGGCACUGCCCGG
UAGCUAAAUGCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCACGAAACUUGCCCCGAGAUGAGUUCUCCCUGACCCUUUA
AGGGUCCUGAAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGCGCAGCGAUGCGUUGAGCUAACCGGUA
CUAAUGAACCGUGAGGCUUAACCU
>URS0000ABB5F7_511145 Escherichia coli str. K-12 substr. MG1655 Eukaryotic large subunit ribosomal RNA
AAUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCC
CAGUAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCUGAAUCAGUGUGUGUGUUAGUGGAAGCGUCUGGAAAGGCGCGCG
AUACAGGGUGACAGCCCCGUACACAAAAAUGCACAUGCUGUGAGCUCGAUGAGUAGGGCGGGACACGUGGUAUCCUGUCU
GAAUAUGGGGGGACCAUCCUCCAAGGCUAAAUACUCCUGACUGACCGAUAGUGAACCAGUACCGUGAGGGAAAGGCGAAA
AGAACCCCGGCGAGGGGAGUGAAAAAGAACCUGAAACCGUGUACGUACAAGCAGUGGGAGCACGCUUAGGCGUGUGACUG
CGUACCUUUUGUAUAAUGGGUCAGCGACUUAUAUUCUGUAGCAAGGUUAACCGAAUAGGGGAGCCGAAGGGAAACCGAGU
CUUAACUGGGCGUUAAGUUGCAGGGUAUAGACCCGAAACCCGGUGAUCUAGCCAUGGGCAGGUUGAAGGUUGGGUAACAC
UAACUGGAGGACCGAACCGACUAAUGUUGAAAAAUUAGCGGAUGACUUGUGGCUGGGGGUGAAAGGCCAAUCAAACCGGG
AGAUAGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGUGAAUUCAUCUCCGGGGGUAGAGCACUGUUUCGGCAAG
GGGGUCAUCCCGACUUACCAACCCGAUGCAAACUGCGAAUACCGGAGAAUGUUAUCACGGGAGACACACGGCGGGUGCUA
ACGUCCGUCGUGAAGAGGGAAACAACCCAGACCGCCAGCUAAGGUCCCAAAGUCAUGGUUAAGUGGGAAACGAUGUGGGA
AGGCCCAGACAGCCAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCACUGGUCGAGUCGGCCU
GCGCGGAAGAUGUAACGGGGCUAAACCAUGCACCGAAGCUGCGGCAGCGACGCUUAUGCGUUGUUGGGUAGGGGAGCGUU
CUGUAAGCCUGCGAAGGUGUGCUGUGAGGCAUGCUGGAGGUAUCAGAAGUGCGAAUGCUGACAUAAGUAACGAUAAAGCG
GGUGAAAAGCCCGCUCGCCGGAAGACCAAGGGUUCCUGUCCAACGUUAAUCGGGGCAGGGUGAGUCGACCCCUAAGGCGA
GGCCGAAAGGCGUAGUCGAUGGGAAACAGGUUAAUAUUCCUGUACUUGGUGUUACUGCGAAGGGGGGACGGAGAAGGCUA
UGUUGGCCGGGCGACGGUUGUCCCGGUUUAAGCGUGUAGGCUGGUUUUCCAGGCAAAUCCGGAAAAUCAAGGCUGAGGCG
UGAUGACGAGGCACUACGGUGCUGAAGCAACAAAUGCCCUGCUUCCAGGAAAAGCCUCUAAGCAUCAGGUAACAUCAAAU
CGUACCCCAAACCGACACAGGUGGUCAGGUAGAGAAUACCAAGGCGCUUGAGAGAACUCGGGUGAAGGAACUAGGCAAAA
UGGUGCCGUAACUUCGGGAGAAGGCACGCUGAUAUGUAGGUGAAGCGACUUGCUCGUGGAGCUGAAAUCAGUCGAAGAUA
CCAGCUGGCUGCAACUGUUUAUUAAAAACACAGCACUGUGCAAACACGAAAGUGGACGUAUACGGUGUGACGCCUGCCCG
GUGCCGGAAGGUUAAUUGAUGGGGUUAGCGCAAGCGAAGCUCUUGAUCGAAGCCCCGGUAAACGGCGGCCGUAACUAUAA
CGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAUGGCGUAAUGAUGGCCAGGCUGUCUCCAC
CCGAGACUCAGUGAAAUUGAACUCGCUGUGAAGAUGCAGUGUACCCGCGGCAAGACGGAAAGACCCCGUGAACCUUUACU
AUAGCUUGACACUGAACAUUGAGCCUUGAUGUGUAGGAUAGGUGGGAGGCUUAGAAGUGUGGACGCCAGUCUGCAUGGAG
CCGACCUUGAAAUACCACCCUUUAAUGUUUGAUGUUCUAACGUUGACCCGUAAUCCGGGUUGCGGACAGUGUCUGGUGGG
UAGUUUGACUGGGGCGGUCUCCUCCUAAAGAGUAACGGAGGAGCACGAAGGUUGGCUAAUCCUGGUCGGACAUCAGGAGG
UUAGUGCAAUGGCAUAAGCCAGCUUGACUGCGAGCGUGACGGCGCGAGCAGGUGCGAAAGCAGGUCAUAGUGAUCCGGUG
GUUCUGAAUGGAAGGGCCAUCGCUCAACGGAUAAAAGGUACUCCGGGGAUAACAGGCUGAUACCGCCCAAGAGUUCAUAU
CGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCACAUCCUGGGGCUGAAGUAGGUCCCAAGGGUGAUGCUGUUCGCC
AUUUAAAGUGGUACGCGAGCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCCGUGGGCGCUGGAGAACUGA
GGGGGGCUGCUCCUAGUACGAGAGGACCGGAGUGGACGCAUCACUGGUGUUCGGGUUGUCAUGCCAAUGGCACUGCCCGG
UAGCUAAAUGCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCACGAAACUUGCCCCGAGAUGAGUUCUCCCUGACCCUUUA
AGGGUCCUGAAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGCGCAGCGAUGCGUUGAGCUAACCGGUA
CUAAUGAACCGUGA
>URS0000297FB5_511145 Escherichia coli str. K-12 substr. MG1655 rdlD antitoxin
GUCUAGAGUCAAGAUUAGCCCCCGUGGUGUUGUCAGGUGCAUACCUGCAACGUGCGGGGGUUUUCU
>URS0000018BA8_511145 Escherichia coli str. K-12 substr. MG1655 sRNA antisense regulator of ompC and ompW mRNA instability, Hfq-dependent
ACUGCUUUUCUUUGAUGUCCCCAUUUUGUGGAGCCCAUCAACCCCGCCAUUUCGGUUCAAGGUUGAUGGGUUUUUUGUU
>URS00004CBB1A_511145 Escherichia coli str. K-12 substr. MG1655 sRNA antisense regulator of OM chitoporin ChiP(YbfM), Hfq-dependent
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUU
UUUU
>URS00005CE4AE_511145 Escherichia coli str. K-12 substr. MG1655 rdlD antitoxin
GUCUGGUUUCAAGAUUAGCCCCCGUUCUGUUGUCAGGUUUUACCUCUCAACGUGCGGGGGUUUUCU
>URS000049EAA4_511145 Escherichia coli str. K-12 substr. MG1655 sRNA antisense regulator of shoB toxin
GUUGAGGGUGCAUGCUGCACAAAAUUAAAGUUAAAAAGUAAAACCCCCGUUCCUUACCAGUUCGGGGGUUUUACUUU
>URS000020E66C_511145 Escherichia coli str. K-12 substr. MG1655 SymR antitoxin
AGUCAUAACUGCUAUUCUCCAGGAAUAGUGAUUGUGAUUAGCGAUGCGGGUGUGUUGGCGCACAUCCGCACCGCGCU
>URS0000528960_511145 Escherichia coli str. K-12 substr. MG1655 sRNA antisense regulator downregulates OM proteins and curli; positively regulated by OmpR/EnvZ, Hfq-dependent
CCCAGAGGUAUUGAUAGGUGAAGUCAACUUCGGGUUGAGCACAUGAAUUACACCAGCCUGCGCAGAUGCGCAGGUUUUUU
UU
>URS000030BE1E_511145 Escherichia coli str. K-12 substr. MG1655 5S ribosomal RNA
UCUGGCGGCAGUAGCGCGGUGGUCCCACCUGACCCCAUGCCGAACUCAGAAGUGAAACGCCGUAGCGCCGAUGGUAGUGU
GGGGUCUCCCCAUGCGAGAGUAGGGAACUGCCAGAC
>URS000039A860_511145 Escherichia coli str. K-12 substr. MG1655 antisense sRNA RprA
ACGGUUAUAAAUCAACAUAUUGAUUUAUAAGCAUGGAAAUCCCCUGAGUGAAACAACGAAUUGCUGUGUGUAGUCUUUGC
CCAUCUCCCACGAUGGGCUUUUUUUUAA
>URS000002D309_511145 Escherichia coli str. K-12 substr. MG1655 5S ribosomal RNA
CCUGGCGGCAGUAGCGCGGUGGUCCCACCUGACCCCAUGCCGAACUCAGAAGUGAAACGCCGUAGCGCCGAUGGUAGUGU
GGGGUCUCCUCAUGCGAGAGUAGGGAACUGCCAGGC
>URS00004FCB98_511145 Escherichia coli str. K-12 substr. MG1655 sRNA antisense regulator activates genes that detoxify oxidative damage, Hfq-dependent
GAAACGGAGCGGCACCUCUUUUAACCCUUGAAGUCACUGCCCGUUUCGAGAGUUUCUCAACUCGAAUAACUAAAGCCAAC
GUGAACUUUUGCGGAUCUCCAGGAUCCGCU
>URS00001315A5_511145 Escherichia coli str. K-12 substr. MG1655 sRNA antisense regulator of csgD and yejABEF, Hfq-dependent
CUUCCGAUGUAGACCCGUAUUCUUCGCCUGUACCACGGGUCGGUUUUAGUACAGGCGUUUUCUU
>URS0000288828_511145 Escherichia coli str. K-12 substr. MG1655 5S ribosomal RNA
CCUGGCGGCAGUAGCGCGGUGGUCCCACCUGACCCCAUGCCGAACUCAGAAGUGAAACGCCGUAGCGCCGAUGGUAGUGU
GGGGUCUCCCCAUGCGAGAGUAGGGAACUGCCAGGC
>URS0000199749_511145 Escherichia coli str. K-12 substr. MG1655 sRNA antisense regulator destabilzes ptsG mRNA, Hfq-dependent; regulated by sgrR
GAUGAAGCAAGGGGGUGCCCCAUGCGUCAGUUUUAUCAGCACUAUUUUACCGCGACAGCGAAGUUGUGCUGGUUGCGUUG
GUUAAGCGUCCCACAACGAUUAACCAUGCUUGAAGGACUGAUGCAGUGGGAUGACCGCAAUUCUGAAAGUUGACUUGCCU
GCAUCAUGUGUGACUGAGUAUUGGUGUAAAAUCACCCGCCAGCAGAUUAUACCUGCUGGUUUUUUUU
>URS00003A4668_511145 Escherichia coli str. K-12 substr. MG1655 sRNA antisense regulator downregulates OM proteins and curli; positively regulated by OmpR/EnvZ, Hfq-dependent
CCCAGAGGUAUUGAUUGGUGAGAUUAUUCGGUACGCUCUUCGUACCCUGUCUCUUGCACCAACCUGCGCGGAUGCGCAGG
UUUUUUUU
>URS00005833D6_511145 Escherichia coli str. K-12 substr. MG1655 Bacterial small signal recognition particle RNA
UGUUGGUUCUCCCGCAACGCUACUCUGUUUACCAGGUCAGGUCCGGAAGGAAGCAGCCAAGGCAGAUGACGCGUGUGCCG
GGAUGUAGCUGGCAGGG
>URS0000237957_511145 Escherichia coli str. K-12 substr. MG1655 sRNA antisense regulator enhances translation of RpoS, Hfq-dependent
AACACAUCAGAUUUCCUGGUGUAACGAAUUUUUUAAGUGCUUCUUGCUUAAGCAAGUUUCAUCCCGACCCCCUCAGGGUC
GGGAUUU
>URS00004BB8BB_511145 Escherichia coli str. K-12 substr. MG1655 Bacterial RNase P class A
GAAGCUGACCAGACAGUCGCCGCUUCGUCGUCGUCCUCUUCGGGGGAGACGGGCGGAGGGGAGGAAAGUCCGGGCUCCAU
AGGGCAGGGUGCCAGGUAACGCCUGGGGGGGAAACCCACGACCAGUGCAACAGAGAGCAAACCGCCGAUGGCCCGCGCAA
GCGGGAUCAGGUAAGGGUGAAAGGGUGCGGUAAGAGCGCACCGCGCGGCUGGUAACAGUCCGUGGCACGGUAAACUCCAC
CCGGAGCAAGGCCAAAUAGGGGUUCAUAAGGUACGGCCCGUACUGAACCCGGGUAGGCUGCUUGAGCCAGUGAGCGAUUG
CUGGCCUAGAUGAAUGACUGUCCACGACAGAACCCGGCUUAUCGGUCAGUUUCACCU
>URS00003DC4B1_511145 Escherichia coli str. K-12 substr. MG1655 5S ribosomal RNA
CCUGGCGGCCGUAGCGCGGUGGUCCCACCUGACCCCAUGCCGAACUCAGAAGUGAAACGCCGUAGCGCCGAUGGUAGUGU
GGGGUCUCCCCAUGCGAGAGUAGGGAACUGCCAGGC
>URS00004E002C_511145 Escherichia coli str. K-12 substr. MG1655 sRNA antisense activator of glmS mRNA, Hfq-dependent
GUAGAUGCUCAUUCCAUCUCUUAUGUUCGCCUUAGUGCCUCAUAAACUCCGGAAUGACGCAGAGCCGUUUACGGUGCUUA
UCGUCCACUGACAGAUGUCGCUUAUGCCUCAUCAGACACCAUGGACACAACGUUGAGUGAAGCACCCACUUGUUGUCAUA
CAGACCUGUUUUAACGCCUGCUCCGUAAUAAGAGCAGGCGUUUUUUU
>URS0000257340_511145 Escherichia coli str. K-12 substr. MG1655 sRNA antisense regulator represses oppA, dppA, gltI and livJ expression, Hfq-dependent
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGGUGAACUUUUGGCUUACGGUUGUGAUGUUGUGUUG
UUGUGUUUGCAAUUGGUCUGCGAUUCAGACCAUGGUAGCAAAGCUACCUUUUUUCACUUCCUGUACAUUUACCCUGUCUG
UCCAUAGUGAUUAAUGUAGCACCGCCUAAUUGCGGUGCUUUUUUUU
>URS000037602E_511145 Escherichia coli str. K-12 substr. MG1655 transfer-messenger RNA
GGGGCUGAUUCUGGAUUCGACGGGAUUUGCGAAACCCAAGGUGCAUGCCGAGGGGCGGUUGGCCUCGUAAAAAGCCGCAA
AAAAUAGUCGCAAACGACGAAAACUACGCUUUAGCAGCUUAAUAACCUGCUUAGAGCCCUCUCUCCCUAGCCUCCGCUCU
UAGGACGGGGAUCAAGAGAGGUCAAACCCAAAAGAGAUCGCGUGGAAGCCCUGCCUGGGGUUGAAGCGUUAAAACUUAAU
CAGGCUAGUUUGUUAGUGGCGUGUCCGUCCGCAGCUGGCAAGCGAAUGUAAAGACUGACUAAGCAUGUAGUACCGAGGAU
GUAGGAAUUUCGGACGCGGGUUCAACUCCCGCCAGCUCCACCA
>URS00000ABFE9_511145 Escherichia coli str. K-12 substr. MG1655 Bacterial small subunit ribosomal RNA
AAAUUGAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAGA
AGCUUGCUUCUUUGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCUGAUGGAGGGGGAUAACUACUGGA
AACGGUAGCUAAUACCGCAUAACGUCGCAAGACCAAAGAGGGGGACCUUCGGGCCUCUUGCCAUCGGAUGUGCCCAGAUG
GGAUUAGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGA
ACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGC
CGCGUGUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUU
GACGUUACCCGCAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAA
UUACUGGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCCGGGCUCAACCUGGGAACUGCAUCUGA
UACUGGCAAGCUUGAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACC
GGUGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGG
UAGUCCACGCCGUAAACGAUGUCGACUUGGAGGUUGUGCCCUUGAGGCGUGGCUUCCGGAGCUAACGCGUUAAGUCGACC
GCCUGGGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAU
UCGAUGCAACGCGAAGAACCUUACCUGGUCUUGACAUCCACGGAAGUUUUCAGAGAUGAGAAUGUGCCUUCGGGAACCGU
GAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCC
UUUGUUGCCAGCGGUCCGGCCGGGAACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGGGGAUGACGUCAAGUC
AUCAUGGCCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGA
CCUCAUAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCA
GAAUGCCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGU
AGCUUAACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUAACAAGGUAACCGUAGGGGAAC
CUGCGGUUGGAUCACCUCCUUA
>URS0000040F2C_511145 Escherichia coli str. K-12 substr. MG1655 Bacterial small subunit ribosomal RNA
AAAUUGAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAGA
AGCUUGCUUCUUUGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCUGAUGGAGGGGGAUAACUACUGGA
AACGGUAGCUAAUACCGCAUAACGUCGCAAGACCAAAGAGGGGGACCUUCGGGCCUCUUGCCAUCGGAUGUGCCCAGAUG
GGAUUAGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGA
ACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGC
CGCGUGUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUU
GACGUUACCCGCAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAA
UUACUGGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCCGGGCUCAACCUGGGAACUGCAUCUGA
UACUGGCAAGCUUGAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACC
GGUGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGG
UAGUCCACGCCGUAAACGAUGUCGACUUGGAGGUUGUGCCCUUGAGGCGUGGCUUCCGGAGCUAACGCGUUAAGUCGACC
GCCUGGGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAU
UCGAUGCAACGCGAAGAACCUUACCUGGUCUUGACAUCCACAGAACUUUCCAGAGAUGGAUUGGUGCCUUCGGGAACUGU
GAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCU
UUUGUUGCCAGCGGUCCGGCCGGGAACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGGGGAUGACGUCAAGUC
AUCAUGGCCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGA
CCUCAUAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCA
GAAUGCCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGU
AGCUUAACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUAACAAGGUAACCGUAGGGGAAC
CUGCGGUUGGAUCACCUCCUUA
>URS00004DD3DC_511145 Escherichia coli str. K-12 substr. MG1655 Bacterial small subunit ribosomal RNA
AAAUUGAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAAC
AGCUUGCUGUUUCGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCUGAUGGAGGGGGAUAACUACUGGA
AACGGUAGCUAAUACCGCAUAACGUCGCAAGACCAAAGAGGGGGACCUUCGGGCCUCUUGCCAUCAGAUGUGCCCAGAUG
GGAUUAGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGA
ACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGC
CGCGUGUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUU
GACGUUACCCGCAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAA
UUACUGGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCCGGGCUCAACCUGGGAACUGCAUCUGA
UACUGGCAAGCUUGAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACC
GGUGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGG
UAGUCCACGCCGUAAACGAUGUCGACUUGGAGGUUGUGCCCUUGAGGCGUGGCUUCCGGAGCUAACGCGUUAAGUCGACC
GCCUGGGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAU
UCGAUGCAACGCGAAGAACCUUACCUGGUCUUGACAUCCACGGAAGUUUUCAGAGAUGAGAAUGUGCCUUCGGGAACCGU
GAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCC
UUUGUUGCCAGCGGUCCGGCCGGGAACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGGGGAUGACGUCAAGUC
AUCAUGGCCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGA
CCUCAUAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCA
GAAUGCCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGU
AGCUUAACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUAACAAGGUAACCGUAGGGGAAC
CUGCGGUUGGAUCACCUCCUUA
>URS00003C2BBD_511145 Escherichia coli str. K-12 substr. MG1655 Bacterial small subunit ribosomal RNA
AAAUUGAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAGA
AGCUUGCUUCUUUGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCUGAUGGAGGGGGAUAACUACUGGA
AACGGUAGCUAAUACCGCAUAACGUCGCAAGACCAAAGAGGGGUACCUUCGGGCCUCUUGCCAUCGGAUGUGCCCAGAUG
GGAUUAGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGA
ACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGC
CGCGUGUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUU
GACGUUACCCGCAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAA
UUACUGGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCCGGGCUCAACCUGGGAACUGCAUCUGA
UACUGGCAAGCUUGAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACC
GGUGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGG
UAGUCCACGCCGUAAACGAUGUCGACUUGGAGGUUGUGCCCUUGAGGCGUGGCUUCCGGAGCUAACGCGUUAAGUCGACC
GCCUGGGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAU
UCGAUGCAACGCGAAGAACCUUACCUGGUCUUGACAUCCACGGAAGUUUUCAGAGAUGAGAAUGUGCCUUCGGGAACCGU
GAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCC
UUUGUUGCCAGCGGUCCGGCCGGGAACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGGGGAUGACGUCAAGUC
AUCAUGGCCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGA
CCUCAUAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCA
GAAUGCCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGU
AGCUUAACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUAACAAGGUAACCGUAGGGGAAC
CUGCGGUUGGAUCACCUCCUUA
>URS0000AB43B1_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAACAGGAGCCAAAUGCCGGAUGCAACGCUGGCGCGUUUUAUCCGGCC
>URS0000AB7608_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAGUCGUGCGCAGAUGCCUGAUGCGACGCUAACGCGUCUUAUCAGACC
>URS0000AB86A5_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGUGCUUGCACCGCAUCCGGCAUCAACGCCUGCACAUUGUCGGAUGCGACGCCGGGGCGUCUUAUCCGAC
C
>URS0000ABB289_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAACCGAUGCCUGAUGCGACGCGGUCGCGUCUUAUCAGGCC
>URS0000AB4E0F_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCUGAUAAGACGCGUAAGCGUCGCAUCAGGCAAUGGUGCUCGGAUGCCGGAUGCGGCGUAAACGCCUUAUCCGGCC
>URS0000AB6204_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCUGAUAAGACGCGUUAGCGUCGCAUCAGGCAUCUGCGCACGACUGCCGGAUGCGGCGUAAACGCCUUAUCCGGCC
>URS0000AB68F4_511145 Escherichia coli str. K-12 substr. MG1655 MicL sRNA
UAUGGCCGGAGCAGGAGUCCGUGCAGAAAACCUGCACCACUUCCUCGAUGCCGGAGUGCUGGAAGUCCAUAGCUCCGCGG
GAGCGUGGCAAGCCUCACCGAUGCGUUAUCGUAAUCAAGGAUUGUCCAUGUCAUCAGAUGAACACGCGGACGAGUAUUCG
CGUUAUAUCGUAGACGGGGCGGCGGUUGCUGAAAUGAAAGGAAUCAUUGAACGCCAUCAGGCCAAAUGAUUUUUACCGUU
GCAUCAUGUCGCCCAAUAUGAUGCUUGCUCGUACCAGGCCCCUGCAAUUUCAACAGGGGCCUUUUUUU
>URS0000ABB3EF_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAGUUGGCGCACAAUGCCUGAUGCGACGCUUGUCGCGUCUUAUCAUGCC
>URS0000ABCB74_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUAUGCCGCAUCCGGCAGUUAUGCGCAGAUGCCUGAUGCGACGCUGGCGCGUCUUAUCAUGCC
>URS000016FBD9_511145 Escherichia coli str. K-12 substr. MG1655 SraC/RyeA RNA
AGAUAAAAAGAGACCGAACACGAUUCCUGUAUUCGGUCCAGGGAAAUGGCUCUUGGGAGAGAGCCGUGCGCUAAAAGUUG
GCAUUAAUGCAGGCUUAGUUGCCUUGCCCUUUAAGAAUAGAUGACGACGCCAGGUUUUCCAGUUU
>URS0000AB4BD4_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAGUCGUGCGCAGAUGCCUGAUGCGACGCUAACGCGUCUUAUCAGGCC
>URS0000AB98DB_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUUCGGCAACCAACGCCUGAUGCGACGCUUGCGCGUCUUAUCAGGCC
>URS0000ABAD4F_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCAGGCAUCUGAGCAUGAUGCCUGAUGCGGCGCUGGUCGCGUCUUAUCAGGCC
>URS0000ABB7E7_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGACGGAUAAGGCGUUUACGCUGCAUCCGGCAACCUAUGCCUGAUGCGACGCUGAAGCGUCUUAUCAUGCC
>URS0000373BFC_511145 Escherichia coli str. K-12 substr. MG1655 ArcZ RNA
GUGCGGCCUGAAAAACAGUGCUGUGCCCUUGUAACUCAUCAUAAUAAUUUACGGCGCAGCCAAGAUUUCCCUGGUGUUGG
CGCAGUAUUCGCGCACCCCGGUCUAGCC
>URS0000AB7ADF_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGUCAGAUAAGGCGUUUUCGCCGCAUCCGACAUUCGCACACGAUGCCUGAUGCGACGCUGGCGCGUCUUAUCAGGCC
>URS0000ABA331_511145 Escherichia coli str. K-12 substr. MG1655 antisense RNA of dnaA mRNA
UUUGGCAUUCGGCUUGCGCGCCAUAAUGCCGUUACCCACCGCAUGCAGCAGGUGAGUUUUACCCAGACCCGUGCCGCCAU
A
>URS0000ABACB4_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGUUUACGCCGCAUCCGACAUCAACGCCUGAUGCGACGCUUGCCGCGUCUUAUCAGGCC
>URS00009DFFAD_511145 Escherichia coli str. K-12 substr. MG1655 Cobalamin riboswitch
CUGUAGCAUCCACUUGCCGGUCCUGUGAGUUAAUAGGGAAUCCAGUGCGAAUCUGGAGCUGACGCGCAGCGGUAAGGAAA
GGUGCGAUGAUUGCGUUAUGCGGACACUGCCAUUCGGUGGGAAGUCAUCAUCUCUUAGUAUCUUAGAUACCCCUCCAAGC
CCGAAGACCUGCCGGCCAACGUCGCAUCUGG
>URS00006EC0FB_511145 Escherichia coli str. K-12 substr. MG1655 Enterobacterial sRNA STnc370
ACCGAAAGACGAUUAAUUUCGUUUUUUAGUCAUAAAAAACCUGCCAGCGAUGGCAGGUUUUUUUUUGCC
>URS000039E69D_511145 Escherichia coli str. K-12 substr. MG1655 TPP riboswitch (THI element)
CCAAACGACUCGGGGUGCCCUUCUGCGUGAAGGCUGAGAAAUACCCGUAUCACCUGAUCUGGAUAAUGCCAGCGUAGGGA
AGUCACGGACCACCAGG
>URS000053ACE7_511145 Escherichia coli str. K-12 substr. MG1655 sroD RNA
UUACGUGACGAAGCGCGCGGCAAAGUGGACAAUAAAGCCUGAGCGUUAAGUCAGUCGUCAGACGCCGGUUAAUCCGGCGU
UUUUUU
>URS00001855A3_511145 Escherichia coli str. K-12 substr. MG1655 Lysine riboswitch
CAGGCCAGAAGAGGCGCGUUGCCCAAGUAACGGUGUUGGAGGAGCCAGUCCUGUGAUAACACCUGAGGGGGUGCAUCGCC
GAGGUGAUUGAACGGCUGGCCACGUUCAUCAUCGGCUACAGGGGCUGAAUCCCCUGGGUUGUCACCAGAAGCGUUCGCAG
UCGGGCGUUUCGCAAGUGGUGGAGCACUUCUGGGUGA
>URS000065505D_511145 Escherichia coli str. K-12 substr. MG1655 IS009
UGAAUGAUAAAAAUGGCGCAAAUACAGCGCCAUUUUUAUAGGUUAAAAACAUUGCUUUUUAUAUUCUGAUGCAGAUAGUC
AGUGAGUAUAUCGCGCUACUUCAGGAUGAUGUAGAUCCGAAGAACGCUACAGAAGAGAGGCAUUGUUGCUGGCAAAUAGA
AGAAGUAUCGGGUUUUGUUACCCCUGAAAAACGAAGCCCC
>URS000063C6B5_511145 Escherichia coli str. K-12 substr. MG1655 Salmonella enterica Typhi npcRNA 44
CUUUAAAAAUCUGGAUCAAGCUGAAAAUUGAAACACUGAACAAUGAAAGUUGUUCGUGAGUCUCUCAAAUUUUCGCAACA
CGAUGAUGGAUCGCAAGAAACAUCUUCGG
>URS00000ED6EE_511145 Escherichia coli str. K-12 substr. MG1655 Enterobacterial sRNA STnc540
UCAGACCCGGGCAGAAGUUAAAAAGCCGGGUCGAAAACGCUUCGCCCAAAGACGAGUAAUCUGAUCUAACUAAAAAGGCC
GCUCUGCGGCCUUUUUUCUUUUCACUGUCGAAGAGUCACCGUAAAAUCAACGCCAUGACACUUCAGCAGAACGGAUACC
>URS00005E2A61_511145 Escherichia coli str. K-12 substr. MG1655 sroE RNA
AUAACGUGAUGGGAAGCGCCUCGCUUCCCGUGUAUGAUUGAACCCGCAUGGCUCCCGAAACAUUGAGGGAAGCGUUGAGG
GUUCAUUUUUAU
>URS00006A201E_511145 Escherichia coli str. K-12 substr. MG1655 Salmonella enterica Typhi npcRNA 44
CUUUAAAAAUCUGGAUCAAGCUGAAAAUUGAAACACUGAACAAUGAAAGUUGUUCGUGAGUCUCUCAAAUUUUCGCAACU
CUGAAGUGAAACAUCUUCGG
>URS00003AB795_511145 Escherichia coli str. K-12 substr. MG1655 GadY
CUUACUGAGAGCACAAAGUUUCCCGUGCCAACAGGGAGUGUUAUAACGGUUUAUUAGUCUGGAGACGGCAGACUAUCCUC
UUCCCGGUCCCCUAUGCCGGGUUUUUUUUAUGUC
>URS00006874BE_511145 Escherichia coli str. K-12 substr. MG1655 Salmonella enterica Typhi npcRNA 44
CUUUAAAAAUCUGGAUCAAGCUGAAAAUUGAAACACUGAACAACGAAAGUUGUUCGUGAGUCUCUCAAAUUUUCGCAACA
CGAUGAUGAAUCGAAAGAAACAUCUUCGG
>URS00003A8C6B_511145 Escherichia coli str. K-12 substr. MG1655 Pseudomonas sRNA P26
ACCCUUCCGGUUGCAGCCUGAGAAAUCAGGCUGAUGGCUGGUGACUUUUUAGUCACCAGCCU
>URS0000543C9D_511145 Escherichia coli str. K-12 substr. MG1655 sroC RNA
ACUAAUUACAAGAACCAGGGGCGGAAAUUCCAGCCCUCUCGAUUGUUACGUAGCACGGACAGACUAUACGCCUGAUGGUC
GUUCCCCAUCGGGCCUGAAAACCGCAAUACGCUGGGUAACAAUCUUCGAGGGUAGCAGUUAACGCUGCUACCCUCUUUUU
UCU
>URS00001E4194_511145 Escherichia coli str. K-12 substr. MG1655 SdsR_RyeB RNA
AGGCAACUAAGCCUGCAUUAAUGCCAACUUUUAGCGCACGGCUCUCUCCCAAGAGCCAUUUCCCUGGACCGAAUACAGGA
AUCGUGUUCGGUCUCUUUUU
>URS00006A1E14_511145 Escherichia coli str. K-12 substr. MG1655 Enterobacterial sRNA STnc70
AAGGGCAACACCUCAGCCUGCAGGCAGGCACUGAAGAUACCAAAGGGUAGUUCAGAUUACACGGUCACCUGGAAAGGGGG
CCAUUUUACUUUUU
>URS000039B80D_511145 Escherichia coli str. K-12 substr. MG1655 C0719 RNA
UAUAGGCGUUAUACUUUACAGCAACAGUACGCCGCUAACGCAAUUGCUACCUCUGGCAUAACAAGUAUAUCGGGUAAGGG
UUUCUGUUCCGCACACGCAGACGCAGAGUAUCGUUAAGAUGUCCAUAUUGUUGUUUUAGGCCCGCUAGUAAUGCGCUACG
GGUAUUUAAUAUUGUUAAACCCUGAUAAUCGCUCCGGUUAUUUCCGGGAUAAAUGUACUACC
>URS00006DA5E8_511145 Escherichia coli str. K-12 substr. MG1655 Enterobacterial sRNA STnc240
CCCAUUUAGGCACAAUGCGCCGCUGUCAAAAAAUGACUAAAAACCGACGUUUCAUCAGCGUCGGUUAUUUUUUGC
>URS0000700CD4_511145 Escherichia coli str. K-12 substr. MG1655 IS009
UGAAAGAUGCAGAAGCAGAAAAACUGUUCCGGAUUCGGGAGGCGGAAGAAACAAAAAACAGCCUGAUGCAGGUAGCCAGU
GAGCAUAUUGCGCCACUUCAGGAUGCUGUAGAUCUGGAAAUCGCAACGGAGGAAGAAACCUCAUUGCUGGAAGCCUGGAA
AAAAUAUCGGGUGUUGCUGAACCGUGUUGAUACAUCAAC
>URS00006B9CC6_511145 Escherichia coli str. K-12 substr. MG1655 IS009
UGAAGGAUACGGAAGCAGAAAAACUGUUCCGGAUCCGGGAGGCGGAAGAAACAAAAAACAACCUGAUGCAGGUAGCCAGU
GAGCAUAUUGCGCCGCUUCAGGAUGCUGCAGAUCUGGAAAUUGCAACGGAGGAAGAAAUCUCGUUGCUGGAAGCAUGGAA
AAAGUAUCGGGUAUUGCUGAACCGUGUUGAUACGUCAAC
>URS00006E54FA_511145 Escherichia coli str. K-12 substr. MG1655 Salmonella enterica Typhi npcRNA 44
CUUUAAAAAUCUGGAUCAAGCUGAAAAUUGAAACACUGAACAACGAGAGUUGUUCGUGAGUCUCUCAAAUUUUCGCAACA
CGAUGAUGAAUCGAAAGAAACAUCUUCGG
>URS0000632063_511145 Escherichia coli str. K-12 substr. MG1655 Staphylococcus sRNA sau-50
CAAAUGCCGGUACGUUAGCUGCGGCAAUUUUGAUUUCUUUACCGGUCUGCGGGUUGCGGCCAGUACGCUCAGCGCGGUGG
UUCACUUUGAAGGUACCGAAACCAACCAGUUGUACAGCAUCGCCUUCUUUCAGAGACUCAGUAAUUGCAGCC
>URS00006E02FD_511145 Escherichia coli str. K-12 substr. MG1655 Enterobacterial sRNA STnc430
AAAAGCAAUUAAUCUGCGUAUUUUCCGAAAUAAACAACGAUUAAAAAUCUAUUUUAGGAUUAACCUCACGGUAUGAUUUC
CGUUAAAUUACAGACAAGGGGAUUUAUCUGAUAAAAAAAUGCCGACAUAACGUCGGCAUUGUUAUUAAGG
>URS00006328D8_511145 Escherichia coli str. K-12 substr. MG1655 MicC RNA
CGGGUUAUAUGCCUUUAUUGUCACAGAUUUUAUUUUCUGUUGGGCCAUUGCAUUGCCACUGAUUUUCCAACAUAUAAAAA
GACAAGCCCGAACAGUCGUCCGGGCUUUUUUUUUAGAAUUG
>URS00001AA27A_511145 Escherichia coli str. K-12 substr. MG1655 C0465 RNA
GGGAAACUUUAUUGCUGAUGCCACCCGCCGCGAAAUUGAAAUAAAAAACCCGAUGCGCAGAUCAUCGGGUUCAUUUCA
>URS00006520C8_511145 Escherichia coli str. K-12 substr. MG1655 Glm Y RNA activator of glmS mRNA
AGUGGCUCAUUCACCGACUUAUGUCAGCCCCUUCGGGACGUGCUACAUAAAAUACGAAUGACGCACAACAAGGUGCCUGC
CGUCCAACUUCUGAUAUCAGCGUAGCUAUAUCAACCAUCGGGCGAAACGUCGAGUUAGGCACCGCCUU
>URS00001E53D4_511145 Escherichia coli str. K-12 substr. MG1655 SraG RNA
CUUCUGCGCAUCCUCGCGACUAAUGACAACCCUAACCCAGCUCUAUGUGGGUAAAGCCUCUCAUUAGCCGCGCGAACCUC
UGCAACGGAAGAUCAUUCAUAGCAACAAUACAUUAGUUUCCAGUGAAUUGCUGCCGUCAGCUUGAAAAAAGGGGCCACUC
AGGCCCCCUUUU
>URS00006C2A48_511145 Escherichia coli str. K-12 substr. MG1655 istR Hfq binding RNA
CGUCAAAAUUCGUGCCGAAAUUGCGCGUUCUGCGCGGAACACGUAUACUUUCAGUGUUGACAUAAUACAGUGUGCUUUGC
GGUUACCAGCCGCAGGCGACUGACGAAACCUCGCUCCGGCGGGGUUUUUU
>URS0000265A50_511145 Escherichia coli str. K-12 substr. MG1655 sraL Hfq binding RNA
AUCAACACCAACCGGAACCUCCACCACGUGCUCGAAUGAGGUGUGUUGACGUCGGGGGAAACCCUCCUGUGUACCAGCGG
GAUAGAGAGAAAGACAAAGACCGGAAAACAAACUAAAGCGCCCUUGUGGCGCUUUAGUUUU
>URS00006B0E17_511145 Escherichia coli str. K-12 substr. MG1655 STnc560 Hfq binding RNA
CAUUCAUUGAGAAAACUGAUGCUACUGUGUCAACGAUUCGUUAUCAGUGCAGGAAAAUGCCUGUUAGCGUAAAAGCAAAA
CACAAAUCUAUCCAUGCAAGCAUUCACCGCCGGUUUACUGGCGGUUUUUUUUCGCCGUCAUAAAAAUCAGGCCCCUUGUA
CACAACUGUAACAAGGGGCCGGUUAGGUGAGGGAUUAUCUCCGUUCAUUAGUCA
>URS00006296AF_511145 Escherichia coli str. K-12 substr. MG1655 IS128 RNA
UUUAGCGUAUUAUCGACACCGGCCCUUUCCGCCGUGUUCGGUAAUAAAAUAACCUGGCUUAUUAGUCCGAAUUCAGACAA
AUAUAAAUAAAUCCUGCUCAAAAUUAAAAAUUCUAACCGGUAAAAGAUAUUACUUAAACAUGUAAAUUCACUUUCCUUUA
AAAAACAAAAAACCGCCAAAAUCAGGCGGUUUUUUGUUGCUGGUCCGGU
>URS00005592C9_511145 Escherichia coli str. K-12 substr. MG1655 CsrB/RsmB RNA family
GAGUCAGACAACGAAGUGAACAUCAGGAUGAUGACACUUCUGCAGGACACACCAGGAUGGUGUUUCAGGGAAAGGCUUCU
GGAUGAAGCGAAGAGGAUGACGCAGGACGCGUUAAAGGACACCUCCAGGAUGGAGAAUGAGAACCGGUCAGGAUGAUUCG
GUGGGUCAGGAAGGCCAGGGACACUUCAGGAUGAAGUAUCACAUCGGGGUGGUGUGAGCAGGAAGCAAUAGUUCAGGAUG
AACGAUUGGCCGCAAGGCCAGAGGAAAAGUUGUCAAGGAUGAGCAGGGAGCAACAAAAGUAGCUGGAAUGCUGCGAAACG
AACCGGGAGCGCUGUGAAUACAGUGCUCCCUUUUUUUAUU
>URS00003982CB_511145 Escherichia coli str. K-12 substr. MG1655 TPP riboswitch (THI element)
AAUUUCUUGUCGGAGUGCCUUAACUGGCUGAGACCGUUUAUUCGGGAUCCGCGGAACCUGAUCAGGCUAAUACCUGCGAA
GGGAACAAGAGUUAAUCUGCU
>URS00001E4BD3_511145 Escherichia coli str. K-12 substr. MG1655 sraA
AUGUACGUCAGUAUAUGGGGAUGUUUCCCCCACAUUCAACGCCGAGAAUAGAGGAAAAAUUAAAGGGGAGAUAAAAUCCC
CCCUUUUUGGUUAACU
>URS00006B944E_511145 Escherichia coli str. K-12 substr. MG1655 Enterobacteria sRNA STnc130
UACAUCGAAUAAUUUGAAAAUCAAAGAGAUAGGUAGAUUUUCACUCGAAAGUAGUAUUACGUGUAAGUGAGGAGUAAUUA
UUGUUCGGUAUCAAAGGGAGACAAAAAAAGCGCCCGCAGGCGCUUUUUAGAUUCA
>URS00003876AA_511145 Escherichia coli str. K-12 substr. MG1655 FMN riboswitch (RFN element)
GCUUAUUCUCAGGGCGGGGCGAAAUUCCCCACCGGCGGUAAAUCAACUCAGUUGAAAGCCCGCGAGCGCUUUGGGUGCGA
ACUCAAAGGACAGCAGAUCCGGUGUAAUUCCGGGGCCGACGGUUAGAGUCCGGAUGGGAGAGAGUAACG
>URS000061AD0F_511145 Escherichia coli str. K-12 substr. MG1655 C0299 RNA
GCCACGUGAGCACAAGAUAAGAGAACGAAAAAUCAGCAGCCUAUGCAGCGACAAAUAUUGAUAGCCUGAAUCAGUAUUG
>URS000071BBB7_511145 Escherichia coli str. K-12 substr. MG1655 Enterobacterial sRNA STnc410
AGGAUAAAUUGUUCAAUAACGGAUUAUCCCCGCUGACGAAAGCGCCAUUUUCGACCAUCGUCACGCCUUUUGUCUGCAGA
AAAUUAAGGCAGUACCUUAAUUUAAGCGUCAGGUGGAUGUUUUUGCUCUUAUUUCGAUCAAUGAAUAAACAGGAAAAC
>URS0000AB32EF_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGACGGAUAAGGCGUUCACGCCGCAUCCGGCAUUCAGUGCCUGAUGCGACGCUGACGCGUCUUAUCAGGCC
>URS0000AB5276_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAAUCGUGCACAAUGCCUGAUGCGACGCUGCCGCGUCUUAUCAGGCC
>URS0000AB7A38_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGACGGAUAAGGCGUUUACGCCGCAUCCGGCAACAGAUGCCUGAUGCGACGCUACCGCGUCUUAUCAGGCC
>URS0000ABB971_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAACAGUGCCAACUGCCUGAUGCGACGCUUGCGCGUCUUAUCAGGCC
>URS0000ABBD9D_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAAUGGUGCUCAACGCCUGAUGCGACGCUGGCGCGUCUUAUCAUGCC
>URS0000AB44D4_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUCCCCGCCGCAUCCGGCACAGGCACCGUGCUGAUGUCUGAUGCGACGCUGGCGCGUCUUAUCAGAC
C
>URS0000AB7074_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGUUUACGCGGCAUCCGGCAGCCGUUGCCUGAUGCGACGCUGUGCGUCUUAUCAGGCC
>URS0000AB7C4C_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGGCGGAUAAGGCGUUCACGCCGCAUCCGCCAGUGGCGCGGUGCAGUUGCCGGAUGCAACGCUUGCCGCGUUUUAUCCGG
CC
>URS0000ABBF7E_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCACUUGUGCCGCAUCCGGCAAUCAAUGCCUGAUGCGACGCUGUCGCGUCUUAUCAGGCC
>URS0000AB2B0A_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAGUCGUGCGCAGAUGCCUGAUGCGACGCUAACGCGUCUUAUCAGGCC
>URS0000AB3E28_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGCUCGCGCCGCAUCCGGCGAUGGUGCACUGAAGCCUGAUGCGACGCUUACCGCGUCUUAUCAUGCC
>URS0000AB8E4F_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGUUUACGCCGCAUCCGACAUCAAYGCCUGAUGCGACGCUUGCCGCGUCUUAUCAGGCC
>URS0000ABC57C_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAGUCGGCGCAUAAUGCCUGAUGCGACGCUUGUCGCGUCUUAUCAUGCC
>URS0000AB61FF_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGUUCACGCCGCAUCCGACAGCCGUUGCCUGAUGCGACGCGUAAUGCGUCUUAUCAGGCC
>URS0000AB632B_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGUUUAUGCCGCAUCCGACAUCAACGCCUGAUGCGACGCUUAACGCGUCUUAUCAGGCC
>URS0000AB8476_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAUCCGAGCACCAUUGCCUGAUGCGACGCUUACCCGUCUUAUCAGGCC
>URS0000AB91E6_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
AGCAGGAUGCGGCGUUGACCCCGCAUCCGGCAAUCAACGUCUGAUGCGACGCUUGCGCGUCUUAUCAGACC
>URS0000ABD407_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGACGGAUAAGGCGUUUACGCCGCAUCCGGCAGUUGUACGCAGGUGCCUGAUGCGACGCUGGCGCGUCUUAUCAUGCC
>URS0000AB56B0_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGUCGGAUAGGGCGUUCACGCCGCAUCCGGCAGCCGUUGCCUGAUGCGACGCUGUGCGUCUUAUCAGGCC
>URS0000AB56D3_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGGCGGAUAAGGCGUUCACGCCGCAUCCGCCAGUGGCGCGGUGCAAUUGCCGGAUGCGACGCUUGCCGCGUCUUAUCCAG
CC
>URS0000AB582B_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GACCGGAAACGGUGUUCACGCCGCAUCCGGCAUUCGGUGCUCAAUGCCUGAUGCGACGCUUACCGCGUCUUAUCAGGCC
>URS0000AB7F4B_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCACUGGUUGCCUGAUGCGACGCUUGCGCGUCUUAUCAGGCC
>URS0000AB801B_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAGUUGGCGCACAAUGCCUGAUGCGACGCUUAACGCGUCUUAUCAUGCC
>URS0000AB889E_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
UGCGGGAUAAGGCGUUUACGCUGCAUCCGGCAUGGAUUGCCUGAUGUGACGCUGGCGCGUCUUAUCAGGUC
>URS0000ABA4F3_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGGUUACGCCGCAUCCGACAUCUAACGCCCAAGCCGGUUGCCUGAUGCGACGCUGGCGCGUCUUAUCA
GGCC
>URS0000A5F9D7_511145 Escherichia coli str. K-12 substr. MG1655 Moco (molybdenum cofactor) riboswitch
AUAACCACUAAACACUCUAGCCUCUGCACCUGGGUCAACUGAUACGGUGCUUUGGCCGUGACAAUGCUCGUAAAGAUUGC
CACCAGGGCGAAGGAAGAAAUGACUUCGCCUCCCGUAUCUGGAAAGGUGUACAUGGCUUCACAAC
>URS0000ABB901_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAAUCGGUGCACGAUGCCUGAUGCGACGCUUGCGCGUCUUAUCAUGCC
>URS0000225C84_511145 Escherichia coli str. K-12 substr. MG1655 IS061 RNA
GCGGCUAUCUGCAAAGUUAAAACUGCAUAAAAAAAUAGAGUCUGUCGACAUCCGCCAGACUCUACAGUACACACAGCAGU
GCAUCCGCGUCUUAAAUCCGGCAUUGUCUCCUCUGCGCCGGUGACUGUGUUAUAACGGUUUUAACCUUUAGUUGCCAAUU
UUCUUCAGUGACAGAUUUCA
>URS0000AB410E_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGUUCACGCCGCAUCCGACAUUUGCACAAGAUGCCUGAUGCGACGCUGUCCGCGUCUUAUCAGGCC
>URS0000AB47A3_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGACGCAUAGCGUCGCAUCCGACAACCGAUGCCUGAUGCGCCGCUGACGCGACUUAUCAGGCC
>URS0000AB6B0E_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GACCGGAUAAGGCGUUCACGCCGCAUCCGGCAGUCGUGCGCCAUGCCUGAUGCGACGCUUUGCGCGUCUUAUCAGGCC
>URS0000AB74B3_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGUUGGAUAAGGCGGUUACGCCGCAUCCGACAUCCAACGUCCGAGCCGGUUGCCUGAUGCGACGCUGGCGCGUCUUAUCA
GGCC
>URS0000AB91F4_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGAAUAAGGCGUUCACGCCGCAUCCGGCAAUCAACGCCUGAUGCGACGCUUGCGCGUCUUAUCAGGCC
>URS0000ABA9CB_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCAGAUAAGGCAUUUUCGCAGCAUCCGGCACUUAUUGUCGGAUGCGAUGCUUGCGCAUCUUAUCCGACC
>URS0000AB240B_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAAUUGGUGCAUGAUGCCUGAUGCGACGCUGUCGCGUCUUAUCGUGCC
>URS0000AB3D0F_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGUUUACGCCGGCAUCCGACAGCCGUUGCCUGAUGCGACGCUGUGCGUCUUAUCAGGCC
>URS0000AB7D18_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGACGUUUACGCCGCAUCCGGCAUUUGUGCGCUGAUGCCUGAUGCGACGCUGACGCGUCUUAUCAUGCC
>URS0000AB9FFD_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGUUGGAUAAGGCGGUUACGCCGCAUCCAACAUCUAACGCCCGAGCCGGUUGCCUGAUGCGACGCUGGCGCGUCUUAUCA
GCA
>URS0000ABA542_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GAUCGGAUAAGGCGUUCACGCCGAAUCCGGCAGUUGUGCUCCGAUGCCUGAUGCGACGCUGGCGCGUCUUAUCAGGCC
>URS0000ABC701_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCGCGCCGCAUCCGGCAGUUGGCGCACAAUGCCUGAUGCGACGCUUGACGCGUCUUAUCAGGCC
>URS0000ABCA31_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGCUCGCGCCGCAUCCGGCAAUCAAUGCCUGAUGCGACGCUGUCGCGUCUUAUCAGGCC
>URS0000AB594D_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAAUUGGUGCAUGAUGCCUGAUGCGACGCUGGCGCGUCUUAUCAGGCC
>URS0000AB5CF1_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGACGUUCACGCCGCAUCCGGCAACUGCGCCAUAAUGCCUGAUGCGACGCUAAACGCGUCUUUUCAGGCG
>URS0000AB6F5E_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAAUGGUGCCGACUGCCUGAUGCGACGCUUGCGCGUCUUAUCAGGCC
>URS0000AB8ADE_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGUCGGAUAGGGCGUUCACGCGGCAUCCGGCAGCCGUUGCCUGAUGCGACGCUGUGCGUCUUAUCAGGCC
>URS0000ABD328_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGUCAGACAAGGCGGUCACGCCGCAUCCGACAUCCAACGCCCGAGCCGGUUGCCUGAUGCGACGCUGGCGCGUCUUAUCA
GGCC
>URS0000AB5767_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGUUUACGCCGCAUCCGACAGCCGUUGCCUGAUGCGACGCUGUGCGUCUUAUCAGGCC
>URS0000AB6266_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAAUAAGUGCUCCGAUGCCUGAUGCGACGCUUGCCGCGUCUUAUCAGGCC
>URS0000AB8461_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAAUGGUGACAAAUGCCUGAUGCGCUACGCUUAUCAGGCC
>URS0000AB9CE8_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGCUCGCGUCGCAUCCGACACCAUGCUCAGAUGCCUGAUGCGACGCUGACGCGUCUUAUCAGGCC
>URS0000ABB645_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGGCGGAUAAGGCGUCCACGCCGCAUCCGCCAGUGGCGCGGUGCAGAUGCCGGAUGCGACGCUUGUCGCGUCUUAUCCGA
CC
>URS0000ABBDFE_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGUCGAAUAAGGCGGUCGCGCCGCAUCCGACAAUGGCCGGCACAUUUGCCUGAUGCGACGCUGACGCGUCUUAUCAGGCC
>URS0000133A43_511145 Escherichia coli str. K-12 substr. MG1655 Fumarate/nitrate reductase regulator sRNA
GCAGGUGAAUGCAACGUCAAGCGAUGGGCGUUGCGCUCCAUAUUGUCUUACUUCCUUUUUUGAAUUACUGCAUAGCACAA
UUGAUUCGUACGACGCCGACUUUGAUGAGUCGGCUUUU
>URS0000165C8D_511145 Escherichia coli str. K-12 substr. MG1655 Spot 42 RNA
AGUUAGUCGCGUAGGGUACAGAGGUAAGAUGUUCUAUCUUUCAGACCUUUUACUUCACGUAAUCGGAUUUGGCUGAAUAU
UUUAGCCGCCCCAGUCAGUAAUGACUGGGGCGUUUUUUA
>URS0000AB2EA9_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGUUUACCGCAUCCGACAUCAAUGCCUGAUGCGACGCUUGCCGCGUCUUAUCAGGCC
>URS0000AB3A04_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUAACGCCGCAUCCGGCAAUGGUGAACGAUGCCUGAUGCGACGCUCACGCGUCUUAUCAGGCC
>URS0000AB5988_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCUGAUAAGGCACUUGUGCCGCAUCCGGCAAUCAAUGCCUGAUGCGACGCUGUCGCGUCUUAUCAGGCC
>URS0000AB5A22_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
AGCCGGAUAAGGCGCUCGCGCCGCAUCCGGCAACGGUGCCAGAUGCCUGAUGCGACGCUUGCGCGUCUUAUCAGGCC
>URS0000AB5F40_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAACGGUGCCGACUGCCUGAUGCGACGCUUGCGCGUCUUAUCAGGCC
>URS0000AB702B_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGGCGGAUAAGGCGUUUUUGCCGCAUCCGCCGUUCUGUGCACAAUGCCUGAUGCGACGCUGGCGCGUCUUAUCAUGCC
>URS0000AB8A02_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAUUUGAGCAUAGUGCCUGAUGCGACGCUUGAUGCGUCUUAUCAGGCC
>URS0000AB91A0_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCUGAUAAGACGCGGCAGCGUCGCAUCAGGCAUUGUGCACGAUUGCCGGAUGCGGCGUGAACGCCUUAUCCGGCC
>URS0000AB948F_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGACGCAUCCGGCAUUAGGUGCUCAAUGCCUGAUGCGCUACGCUUAUCAGGCC
>URS0000AB9C6F_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCAGGAUAAGGCGUUUACGCCGCAUCCGGCAUUUGAGCAGGAUGCCUGAUGCGACGCUGAUAGCGUCUUAUCAGGCC
>URS00009FC17C_511145 Escherichia coli str. K-12 substr. MG1655 TPP riboswitch (THI element)
CCGUUCUCAACGGGGUGCCACGCGUACGCGUGCGCUGAGAAAAUACCCGUCGAACCUGAUCCGGAUAACGCCGGCGAAGG
GAUUUGAGGCUCCUUCUCAA
>URS0000ABAC3B_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGUUUACGCCGCAUCCGGCAGCCGUUGCCUGAUGCGACGCUGUGCGUCUUAUCAGGCC
>URS000068CACC_511145 Escherichia coli str. K-12 substr. MG1655 Enterobacterial sRNA STnc480
UUACAAAAAAAGCCACGGUAUAAACCGUGGCAAAAUCCAACAUAGCUAAAAAUAAUCAGGCGAGUGG
>URS0000699735_511145 Escherichia coli str. K-12 substr. MG1655 Salmonella enterica Typhi npcRNA 44
CUUUAAAAAUCUGGAUCAAGCUGAAAAUUGAAACACUGAACAACGAAAGUUGUUCGUGAGUCUCUCAAAUUUUCGCAACU
CUGAAGUGAAACAUCUUCGG
>URS0000454386_511145 Escherichia coli str. K-12 substr. MG1655 t44 RNA
CUCACUUUGUGUAACAACACACACGUAUCGGCACAUAUUCCGGGGUGCCCUUUGGGGUCGGUAAUAUGGGAUACGUGGAG
GCAUAAC
>URS0000601B65_511145 Escherichia coli str. K-12 substr. MG1655 rseX Hfq binding RNA
UUUUUAUUAUUCUGUGUCAUGAUGCUUCCGUUAUUAGCCUUUUAUCGUCUUGUUUAUAUUUUUUGGGCCGGCAUGAUGCC
GGCUUUUUUU
>URS0000442AE5_511145 Escherichia coli str. K-12 substr. MG1655 CyaR/Rye RNA
UCGCUGAAAAACAUAACCCAUAAAAUGCUAGCUGUACCAGGAACCACCUCCUUAGCCUGUGUAAUCUCCCUUACACGGGC
UUAUUU
>URS00006D66D1_511145 Escherichia coli str. K-12 substr. MG1655 Salmonella enterica sRNA STnc40
GCAGUGCCAUGGCCGCCUGCAAUAAAAGCUAACUGUUGAAGUAAAAGGCGCAGGAUUCUGCGCCUUUUUU
>URS0000696027_511145 Escherichia coli str. K-12 substr. MG1655 Enterobacterial sRNA STnc550
UCCAUUUCACUCCAGACCCUAACUUCAGCUCCUGCAAAAUCGCAAGGUAAACGUUUGCCUUUACACACCUUACGCACAAC
AAAAGUGUUGCGGUACGCCGGAAAAACGACACGGAGCGUCAGGAAGGGGUCAAUGGCCAGUACGCAAAUAGUGUAAGCGU
GGAAUUUUGGCCGAUCUUGACGAAAAGGGGAAGUGGUAAAAACACUUAUCAUUAUAAAUGACGGGAGAUUUUUUCAUCAC
AGUGUGUAAAAAUGCGUAAUAUCACUUUUUGUGUGGUAAUAAAAAAGGAGAAAACUUGAUGAGCACCGACCUUAAAUUUU
CACUGGUAACAACGAUUAUCGUCCUCGGUUUGAUCGUAGCCGUGGGUUUGACUGCCGCGCUGCACUGAUUU
>URS00004200E4_511145 Escherichia coli str. K-12 substr. MG1655 CRISPR RNA direct repeat element
GUUCACUGCCGUACAGGCAGCUUAGAAA
>URS00003B72FE_511145 Escherichia coli str. K-12 substr. MG1655 Magnesium Sensor
CUUACCGGAGGUUAUAUGGAACCUGAUCCCACGCCUCUCCCUCGACGGAGAUUAAAACUUUUCCGGUAAGCCCGUCUUUU
CACGGCGUUACCGGAUGCGUAAGGCCGUGACGUUUU
>URS0000AB27B2_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCAGAUAAGGCGUUCACGCCGCAUCUGGCAUUUGGCUCUCGAUGCCUGAUGCGACGCUGGCGCGUCUUAUCAUGCC
>URS0000AB4F6F_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUCCACGCCGCAUCCGGCAGUGGUGGCAAAUGCCUGAUGCGCUACGCUUAUCAGGCC
>URS0000ABBDC6_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCUGCAUCCGGCACCCGGAGCCUGAUGCGACGCUGGCGCGUCUUAUCAGGCC
>URS00006661D3_511145 Escherichia coli str. K-12 substr. MG1655 Staphylococcus sRNA sau-50
GGAAGCUCGGUACUUUAGCAGCAGCGAUGGUGAUCUCUUUACCGGUCUGCGGGUUGCGGCCAGUACGGGCAGCACGCUCU
UUAACGGCAAAAGUACCAAAACCUACCAGUGCUACAUCAUCCCCUUCUUUCAGAGAUUCAGUUAC
>URS0000668254_511145 Escherichia coli str. K-12 substr. MG1655 rydB RNA
GCCCCUUCAAGAGCUAAGCCACUGAGAGUGCCGGAGAUAAGCGCCGGAUGGGGUAGAAACC
>URS000067BEF6_511145 Escherichia coli str. K-12 substr. MG1655 Enterobacterial sRNA STnc180
GCUUUUAAUACACCGCAGCAAUAACAGCUUGAGUUAUCUCAACACAAAAUAAUAACCGUUAAGGGUGUAGCCUAUGAUCA
ACACAAAUAUGAAAUAUUGGUCCUGGAUGGGCGCGUUUUCUCUGUCGAUGCUCUUCUGGGCCGAACUCCUCUGGAUCAUU
ACUCACUGAUCCUUGACCCCGCUGCGGCGGGGUUGUCAUUUGC
>URS00006D7E9B_511145 Escherichia coli str. K-12 substr. MG1655 tpke11
AACGGGUAAUUAUACUGACACGGGCGAAGGGGAAUUUCCUCUCCGCCCGUGCAUUCAUCUAGGGGCAAUUUAAAAAAG
>URS00007035AF_511145 Escherichia coli str. K-12 substr. MG1655 Salmonella enterica Typhi npcRNA 44
CUUUAAAAAUCUGGAUCAAGCUGAAAAUUGAAACACUGAACAACGAAAGUUGUUCGUGAGUCUCUCAAAUUUUCGCAACA
CGAUGAUGAAUCGUAAGAAACAUCUUCGG
>URS00006DA791_511145 Escherichia coli str. K-12 substr. MG1655 OrzO-P RNA antitoxin family
CACGAUGUUGCACAGGCUGUGGUGUUAGGCCUGAAAAUAGUAAAUAAAAGAACCUGCCUCACCAGCAGGUUUUUUU
>URS00005E5D9E_511145 Escherichia coli str. K-12 substr. MG1655 CsrC RNA family
AUAGAGCGAGGACGCUAACAGGAACAAUGACUCAGGAUGAGGGUCAGGAGCGCCAGGAGGCGAAGACAGAGGAUUGUCAG
GAAGACAAACGUCCGGAGACGUAAUUAAACGGAAAUGGAAUCAACACGGAUUGUUCCGGCUAAAGGAAAAACAGGGUGUG
UUGGCGGCCUGCAAGGAUUGUAAGACCCGUUAAGGGUUAUGAGUCAGGAAAAAAGGCGACAGAGUAAUCUGUCGCCUUUU
UUCUUUGCUUGCUU
>URS00004A6236_511145 Escherichia coli str. K-12 substr. MG1655 MicA sRNA
GAAAGACGCGCAUUUGUUAUCAUCAUCCCUGAAUUCAGAGAUGAAAUUUUGGCCACUCACGAGUGGCCUUUU
>URS0000460FC7_511145 Escherichia coli str. K-12 substr. MG1655 IS102 RNA
ACGAUCAAUAUCUAUUUUAUCGAUCGUUUAUAUCGAUCGAUAAGCUAAUAAUAACCUUUGUCAGUAACAUGCACAGAUAC
GUACAGAAAGACAUUCAGGGAACAACAGAACCACAAUUCAGAAACUCCCACAGCCGGACCUCCGGCACUGUAACCCUUUA
CCUGCCGGUAUCCACGUUUGUGGGUACCGGCUUUUUUAUUCACC
>URS00006DB398_511145 Escherichia coli str. K-12 substr. MG1655 Enterobacterial sRNA STnc630
AUUGAACUCUUAAGGUUCACUUAAUCUCUGACGCGCAUACUCUCCUCCAGGUUAACGGAGGAGAGUGCAAUGAAAAACCG
UGUUUAUGAAAGUUUAACUACCGUGUUCAGCGUGCUGGUGGUCAGCAGCUUUCUUUAUAUCUGGUUUGCCACGUACUGAU
CUUUCU
>URS0000AB274A_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGCAAGCGCCGCAUCCGACAAGCGAUGCCUGAUGUGACGUUUAACGUGUCUUAUCAGGCC
>URS000015AD28_511145 Escherichia coli str. K-12 substr. MG1655 Enterobacterial sRNA STnc450
CGCUAUACUAGCCACUGAAAAUGCCGGUUCACUUUCUUCGAAUCGGCUUUCAAUGUGU
>URS00001BC76C_511145 Escherichia coli str. K-12 substr. MG1655 tp2
GUUAUUCCUUAUCUAUCUAAUAACGUUGAGUUUUCUGGAACCUGUCCCAUUGAACUCUCGCCGGAAAGCUCAAUAAGACA
GGUUCUACGUUUAGUUGCCGCGCUUUUAUAUGCG
>URS0000AB6377_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGACGGAUAAGGCGUUUACGCCGCAUCCGGCAUUCAGUGCAAAUGCCAGAUGCGACGCUGACGCGUCUUAUCUGGCC
>URS0000AB6DFE_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGCAAAGCGCAUCCGGCAUUCAACGCCUGAUGCGACGCUGGCGCGUCUUAUCAGGCC
>URS0000AB77D3_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCUGAUAAGACGCGUUAGCGUCGCAUCAGGCAUCUGCGCACGACUGCCGGAUGCGGCGUGAACGCCUUAUCCGGCC
>URS0000AB9891_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGACGGAUAAGGCUUUCACGCCUUAUCCGACAACAACUGCCUGAUGCGACGCUGACGCGUCUUAUCAGGCC
>URS0000ABAFEC_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAAUCAAUGCCUGAUGCGACGCUGUCGCGUCUUAUCAGGCC
>URS0000AB21EC_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGACAAGACGUUUAUCGCAUCCGGCAGUCGUGUGCAGAUGCCUGAUGCGACGCUAACGCGUCUUAUCAGGCC
>URS0000AB3ACF_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAACAGUGCCGACUGCCUGAUGCGACGCUCGCGCGUCUUAUCAGGCC
>URS0000AB8C16_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAAUCGGUGCAAAUGCCAGAUAAGACACUAACGCGUCUUAUCUGGCC
>URS0000ABA5C5_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAUCCGAGCACCAUUGCCUGAUGCGACGCUUACGCGUCUUAUCAGGCC
>URS0000ABA73A_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCUGAUAAGACGCGUGAGCGUCGCAUCAGGCAUCGUUCACCAUUGCCGGAUGCGGCGUUAACGCCUUAUCCGGCC
>URS0000ABB848_511145 Escherichia coli str. K-12 substr. MG1655 Nucleoid-associated noncoding RNA 4
GGCCUGAUAAGACGGGUAAGCGUCGCAUCAGGCAAUGGUGCUCGGAUGCCGGAUGCGGCGUGAACGCCUUAUCCGGCC
>URS00003146CE_511145 Escherichia coli str. K-12 substr. MG1655 6S / SsrS RNA
AUUUCUCUGAGAUGUUCGCAAGCGGGCCAGUCCCCUGAGCCGAUAUUUCAUACCACAAGAAUGUGGCGCUCCGCGGUUGG
UGAGCAUGCUCGGUCCGUCCGAGAAGCCUUAAAACUGCGACGACACAUUCACCUUGAACCAAGGGUUCAAGGGUUACAGC
CUGCGGCGGCAUCUCGGAGAUUCC
>URS000009B1F3_511145 Escherichia coli str. K-12 substr. MG1655 Short Intergenic Abundant RNA
UUGACGCUGAUUUUUUUUCAACCUAAAGUAAAGGAACAAGGGUGAGGGAGGAUUUCUCCCCCCUCUGAUUGGCUGUUAAU
AAGCUGCGAAACUUACGAGUAACAACACAAUCAGUAUGAUGACGAGCUUCAUCAUAACCCUUUCCUUCUG
>URS00005C8E9E_511145 Escherichia coli str. K-12 substr. MG1655 sroH RNA
GAAAAUAAGAACACAUGUUCUCAUCUUCCAGGAUGCAGCAGACUGAAGAAAUUCAGACAUCCCGCAACCUGCGAUUAUCG
CAAGGUCAAGGCAAAGUCCGGUAAUGGCGUUCUGAAUACCAGAGAUAAUUCUCUGGCGAAACCCACCUUAAGGUGGGUUU
U
>URS000040613E_511145 Escherichia coli str. K-12 substr. MG1655 Short Intergenic Abundant RNA
UUGACAAUCUUAUCGUGAAGGCAUACUUUCAGGAGUGAGGGUAGAGCGGGGUUUCCCCCGCCCUGGUAGUCUUAGUAAGC
GGGGAAGCUUAUGACUAAGAGCACCACGAUGAUGAGUAGCUUCAUCAUGACCCUUUCCUUAUU
>URS000043222F_511145 Escherichia coli str. K-12 substr. MG1655 SraB RNA
UAGGCAUAUUUUUUUCCAUCAGAUAUAGCGUAUUGAUGAUAGCCAUUUUAAACUAUGCGCUUCGUUUUGCAGGUUGAUGU
UUGUUAUCAGCACUGAACGAAAAUAAAGCAGUAACCCGCAAUGUGUGCGAAUUAUUGGCAAAAGGCAACCACAGGCUGCC
UUUUUCUUU
>URS00004F2222_511145 Escherichia coli str. K-12 substr. MG1655 Short Intergenic Abundant RNA
UUGACAUCGUUGAUUCUUUGACCUAAUUUAGUGAGUAAGGGUAAGGGAGGAUUGCUCCUCCCCUGAGACUGACUGUUAAU
AAGCGCUGAAACUUAUGAGUAACAGUACAAUCAGUAUGAUGACAAGUCGCAUCAUAACCCUUCUCCUUCAA
>URS00004E5F89_511145 Escherichia coli str. K-12 substr. MG1655 Short Intergenic Abundant RNA
UUGACACUAAGGGCGGAGUGACAUAAUUUCAGGAGUGAGGGUUAGGGAGAGGUUUCCCCCUCCCCCUGGUGUUCUUAGUA
AGCCUGGAAGCUAAUCACUAAGAGUAUCACCAGUAUGAUGACGUGCUUCAUCAUAACCCUUUCCUUAUU
>URS000006C687_511145 Escherichia coli str. K-12 substr. MG1655 ryfA RNA
GCGGCCCUUUCCGCCGUCUCGCAAACGGGCGCUGGCUUUAGGAAAGGAUGUUCCGUGGCCGUAAAUGCAGGUGUUUCACA
GCGCUUGCUAUCGCGGCAAUAUCGCCAGUGGUGCUGUCGUGAUGCGGUCUUCGCAUGGACCGCACAAUGAAGAUACGGUG
CUUUUGUAUCGUACUUAUUGUUUCUGGUGCGCUGUUAACCGAGGUAAAUAAUAACCGGAGUCUCUCCGGCGACAAUUUAC
UGGUGGUUAACAACCUUCAGAGCAGCAAGUAAGCCCGAAUGCCGCCCUUUGGGCGGCAUAUUUU
>URS00002B6EFE_511145 Escherichia coli str. K-12 substr. MG1655 Short Intergenic Abundant RNA
UUGACGCUGUUGUUUUUUCAACCUAGAGUAAAGGAACAAGGGUAAGGGAGGAUUUCUCCCCCCUCUGAUGAGUUGUUAGU
AAGUCGGGAAACUUAACAGUAACAACACAACCAGUAUGAUGACGAGCUUCAUCAUAACCCUUUCCUUAUA
>URS00001C31F3_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GCCGAGGUGGUGGAAUUGGUAGACACGCUACCUUGAGGUGGUAGUGCCCAAUAGGGCUUACGGGUUCAAGUCCCGUCCUC
GGUA
>URS00003821D9_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
CGGUGAUUGGCGCAGCCUGGUAGCGCACUUCGUUCGGGACGAAGGGGUCGGAGGUUCGAAUCCUCUAUCACCGA
>URS0000AB785F_316385 Escherichia coli str. K-12 substr. DH10B Archaeal large subunit ribosomal RNA
AGGUUAAGCGACUAAGCGUACACGGUGGAUGCCCUGGCAGUCAGAGGCGAUGAAGGACGUGCUAAUCUGCGAUAAGCGUC
GGUAAGGUGAUAUGAACCGUUAUAACCGGCGAUUUCCGAAUGGGGAAACCCAGUGUGUUUCGACACACUAUCAUUAACUG
AAUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCC
CAGUAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCUGAAUCAGUGUGUGUGUUAGUGGAAGCGUCUGGAAAGGCGCGCG
AUACAGGGUGACAGCCCCGUACACAAAAAUGCACAUGCUGUGAGCUCGAUGAGUAGGGCGGGACACGUGGUAUCCUGUCU
GAAUAUGGGGGGACCAUCCUCCAAGGCUAAAUACUCCUGACUGACCGAUAGUGAACCAGUACCGUGAGGGAAAGGCGAAA
AGAACCCCGGCGAGGGGAGUGAAAAAGAACCUGAAACCGUGUACGUACAAGCAGUGGGAGCACGCUUAGGCGUGUGACUG
CGUACCUUUUGUAUAAUGGGUCAGCGACUUAUAUUCUGUAGCAAGGUUAACCGAAUAGGGGAGCCGAAGGGAAACCGAGU
CUUAACUGGGCGUUAAGUUGCAGGGUAUAGACCCGAAACCCGGUGAUCUAGCCAUGGGCAGGUUGAAGGUUGGGUAACAC
UAACUGGAGGACCGAACCGACUAAUGUUGAAAAAUUAGCGGAUGACUUGUGGCUGGGGGUGAAAGGCCAAUCAAACCGGG
AGAUAGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGUGAAUUCAUCUCCGGGGGUAGAGCACUGUUUCGGCAAG
GGGGUCAUCCCGACUUACCAACCCGAUGCAAACUGCGAAUACCGGAGAAUGUUAUCACGGGAGACACACGGCGGGUGCUA
ACGUCCGUCGUGAAGAGGGAAACAACCCAGACCGCCAGCUAAGGUCCCAAAGUCAUGGUUAAGUGGGAAACGAUGUGGGA
AGGCCCAGACAGCCAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCACUGGUCGAGUCGGCCU
GCGCGGAAGAUGUAACGGGGCUAAACCAUGCACCGAAGCUGCGGCAGCGACGCUUAUGCGUUGUUGGGUAGGGGAGCGUU
CUGUAAGCCUGCGAAGGUGUGCUGUGAGGCAUGCUGGAGGUAUCAGAAGUGCGAAUGCUGACAUAAGUAACGAUAAAGCG
GGUGAAAAGCCCGCUCGCCGGAAGACCAAGGGUUCCUGUCCAACGUUAAUCGGGGCAGGGUGAGUCGACCCCUAAGGCGA
GGCCGAAAGGCGUAGUCGAUGGGAAACAGGUUAAUAUUCCUGUACUUGGUGUUACUGCGAAGGGGGGACGGAGAAGGCUA
UGUUGGCCGGGCGACGGUUGUCCCGGUUUAAGCGUGUAGGCUGGUUUUCCAGGCAAAUCCGGAAAAUCAAGGCUGAGGCG
UGAUGACGAGGCACUACGGUGCUGAAGCAACAAAUGCCCUGCUUCCAGGAAAAGCCUCUAAGCAUCAGGUAACAUCAAAU
CGUACCCCAAACCGACACAGGUGGUCAGGUAGAGAAUACCAAGGCGCUUGAGAGAACUCGGGUGAAGGAACUAGGCAAAA
UGGUGCCGUAACUUCGGGAGAAGGCACGCUGAUAUGUAGGUGAAGCGACUUGCUCGUGGAGCUGAAAUCAGUCGAAGAUA
CCAGCUGGCUGCAACUGUUUAUUAAAAACACAGCACUGUGCAAACACGAAAGUGGACGUAUACGGUGUGACGCCUGCCCG
GUGCCGGAAGGUUAAUUGAUGGGGUUAGCGCAAGCGAAGCUCUUGAUCGAAGCCCCGGUAAACGGCGGCCGUAACUAUAA
CGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAUGGCGUAAUGAUGGCCAGGCUGUCUCCAC
CCGAGACUCAGUGAAAUUGAACUCGCUGUGAAGAUGCAGUGUACCCGCGGCAAGACGGAAAGACCCCGUGAACCUUUACU
AUAGCUUGACACUGAACAUUGAGCCUUGAUGUGUAGGAUAGGUGGGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGAG
CCGACCUUGAAAUACCACCCUUUAAUGUUUGAUGUUCUAACGUUGACCCGUAAUCCGGGUUGCGGACAGUGUCUGGUGGG
UAGUUUGACUGGGGCGGUCUCCUCCUAAAGAGUAACGGAGGAGCACGAAGGUUGGCUAAUCCUGGUCGGACAUCAGGAGG
UUAGUGCAAUGGCAUAAGCCAGCUUGACUGCGAGCGUGACGGCGCGAGCAGGUGCGAAAGCAGGUCAUAGUGAUCCGGUG
GUUCUGAAUGGAAGGGCCAUCGCUCAACGGAUAAAAGGUACUCCGGGGAUAACAGGCUGAUACCGCCCAAGAGUUCAUAU
CGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCACAUCCUGGGGCUGAAGUAGGUCCCAAGGGUAUGGCUGUUCGCC
AUUUAAAGUGGUACGCGAGCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCCGUGGGCGCUGGAGAACUGA
GGGGGGCUGCUCCUAGUACGAGAGGACCGGAGUGGACGCAUCACUGGUGUUCGGGUUGUCAUGCCAAUGGCACUGCCCGG
UAGCUAAAUGCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCACGAAACUUGCCCCGAGAUGAGUUCUCCCUGACUCCUUG
AGAGUCCUGAAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGCGCAGCGAUGCGUUGAGCUAACCGGUA
CUAAUGAACCGUGAGGCUUAACCU
>URS0000220D16_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GGAAGUGUGGCCGAGCGGUUGAAGGCACCGGUCUUGAAAACCGGCGACCCGAAAGGGUUCCAGAGUUCGAAUCUCUGCGC
UUCCG
>URS00009965F1_316407 Escherichia coli str. K-12 substr. W3110 Archaeal small subunit ribosomal RNA
GAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAACAGCUU
GCUGUUUCGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCUGAUGGAGGGGGAUAACUACUGGAAACGG
UAGCUAAUACCGCAUAACGUCGCAAGACCAAAGAGGGGGACCUUCGGGCCUCUUGCCAUCAGAUGUGCCCAGAUGGGAUU
AGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGAACUGA
GACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGCCGCGU
GUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUUGACGU
UACCCGCAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAAUUACU
GGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCCGGGCUCAACCUGGGAACUGCAUCUGAUACUG
GCAAGCUUGAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACCGGUGG
CGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUC
CACGCCGUAAACGAUGUCGACUUGGAGGUUGUGCCCUUGAGGCGUGGCUUCCGGAGCUAACGCGUUAAGUCGACCGCCUG
GGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAU
GCAACGCGAAGAACCUUACCUGGUCUUGACAUCCACGGAAGUUUUCAGAGAUGAGAAUGUGCCUUCGGGAACCGUGAGAC
AGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCCUUUGU
UGCCAGCGGUCCGGCCGGGAACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGGGGAUGACGUCAAGUCAUCAU
GGCCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGACCUCA
UAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCAGAAUG
CCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGUAGCUU
AACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUAACAAGGUAACCGUAGGGGAACCUGCG
GUUGGAUCACCUCCU
>URS0000171184_83333 Escherichia coli K-12 tRNA
GGGUGAUUAGCUCAGCUGGGAGAGCACCUCCCUUACAAGGAGGGGGUCGGCGGUUCGAUCCCGUCAUCACCCA
>URS0000297FB5_316407 Escherichia coli str. K-12 substr. W3110 rdlD antitoxin
GUCUAGAGUCAAGAUUAGCCCCCGUGGUGUUGUCAGGUGCAUACCUGCAACGUGCGGGGGUUUUCU
>URS000092D1A0_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial large subunit ribosomal RNA
GGUUAAGCGACUAAGCGUACACGGUGGAUGCCCUGGCAGUCAGAGGCGAUGAAGGACGUGCUAAUCUGCGAUAAGCGUCG
GUAAGGUGAUAUGAACCGUUAUAACCGGCGAUUUCCGAAUGGGGAAACCCAGUGUGUUUCGACACACUAUCAUUAACUGA
AUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCCC
AGUAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCUGAAUCAGUGUGUGUGUUAGUGGAAGCGUCUGGAAAGGCGCGCGA
UACAGGGUGACAGCCCCGUACACAAAAAUGCACAUGCUGUGAGCUCGAUGAGUAGGGC
>URS0000266ADF_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GCUGAUAUGGCUCAGUUGGUAGAGCGCACCCUUGGUAAGGGUGAGGUCCCCAGUUCGACUCUGGGUAUCAGCA
>URS0000907F86_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial small subunit ribosomal RNA
AGGUAGCUUAACCUUCGGGAGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUAACAAGGUAACCGUAGGGG
AACCUGCGGUUGGAUCACCUCCUUA
>URS000035465A_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GCCCGGAUAGCUCAGUCGGUAGAGCAGGGGAUUGAAAAUCCCCGUGUCCUUGGUUCGAUUCCGAGUCCGGGCA
>URS000035465A_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GCCCGGAUAGCUCAGUCGGUAGAGCAGGGGAUUGAAAAUCCCCGUGUCCUUGGUUCGAUUCCGAGUCCGGGCA
>URS0000930AB8_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial large subunit ribosomal RNA
GGUUAAGCGACUAAGCGUACACGGUGGAUGCCCUGGCAGUCAGAGGCGAUGAAGGACGUGCUAAUCUGCGAUAAGCGUCG
GUAAGGUGAUAUGAACCGUUAUAACCGGCGAUUUCCGAAUGGGGAAACCCAGUGUGUUUCGACACACUAUCAUUAACUGA
AUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCCC
AGUAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCUGAAUCAGUGUGUGUGUUAGUGGAAGCGUCUGG
>URS0000978250_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial small subunit ribosomal RNA
AAAUUGAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAGA
AGCUUGCUUCUUUGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCUGAUGGAGGGGGAUAACUACUGGA
AACGGUAGCUAAUACCGCAUAACGUCGCAAGACCAAAGAGGGGGACCUUCGGGCCUCUUGCCAUCGGAUGUGCCCAGAUG
GGAUUAGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUG
>URS000091D185_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial large subunit ribosomal RNA
CUAAAUGCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCACGAAACUUGCCCCGAGAUGAGUUCUCCCUGACUCCUUGAGA
GUCCUGAAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGCGCAGCGAUGCGUUGAGCUAACCGGUACUA
AUGAACCGUGAGGCUUAACCUU
>URS00001160B1_316407 Escherichia coli str. K-12 substr. W3110 MicF RNA
CGCUAUCAUCAUUAACUUUAUUUAUUACCGUCAUUCAUUUCUGAAUGUCUGUUUACCCCUAUUUCAACCGGAUGCCUCGC
AUUCGGUUUUUUUU
>URS00001160B1_879462 Escherichia coli str. K-12 substr. MG1655star MicF RNA
CGCUAUCAUCAUUAACUUUAUUUAUUACCGUCAUUCAUUUCUGAAUGUCUGUUUACCCCUAUUUCAACCGGAUGCCUCGC
AUUCGGUUUUUUUU
>URS0000382173_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GCUGAUAUAGCUCAGUUGGUAGAGCGCACCCUUGGUAAGGGUGAGGUCGGCAGUUCGAAUCUGCCUAUCAGCA
>URS00002A51CF_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GCGGGCAUCGUAUAAUGGCUAUUACCUCAGCCUUCCAAGCUGAUGAUGCGGGUUCGAUUCCCGCUGCCCGCU
>URS00002A51CF_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GCGGGCAUCGUAUAAUGGCUAUUACCUCAGCCUUCCAAGCUGAUGAUGCGGGUUCGAUUCCCGCUGCCCGCU
>URS0000230EE1_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
CGGCACGUAGCGCAGCCUGGUAGCGCACCGUCAUGGGGUGUCGGGGGUCGGAGGUUCAAAUCCUCUCGUGCCGA
>URS00001160B1_316385 Escherichia coli str. K-12 substr. DH10B MicF RNA
CGCUAUCAUCAUUAACUUUAUUUAUUACCGUCAUUCAUUUCUGAAUGUCUGUUUACCCCUAUUUCAACCGGAUGCCUCGC
AUUCGGUUUUUUUU
>URS00003821D9_316385 Escherichia coli str. K-12 substr. DH10B tRNA
CGGUGAUUGGCGCAGCCUGGUAGCGCACUUCGUUCGGGACGAAGGGGUCGGAGGUUCGAAUCCUCUAUCACCGA
>URS000090EDE3_316385 Escherichia coli str. K-12 substr. DH10B Archaeal small subunit ribosomal RNA
GAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAGCAGCUU
GCUGCUUCGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAGCUGCCUGAUGGAGGGGGAUAACUACUGGAAACGG
UAGCUAAUACCGCAUAAUGUCGCAAGACCAAAGAGGGGGACCUUCGGGCCUCUUGCCAUCGGAUGUGCCCAGAUGGGAUU
AGCUUGUUGGUGGGGUAACGGCUCACCAAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGAACUGA
GACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGCCGCGU
GUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUUGACGU
UACCCGCAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAAUUACU
GGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCCGGGCUCAACCUGGGAACUGCAUCUGAUACUG
GCAAGCUUGAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACCGGUGG
CGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUC
CACGCCGUAAACGAUGUCGACUUGGAGGUUGUGCCCUUGAGGCGUGGCUUCCGGAGCUAACGCGUUAAGUCGACCGCCUG
GGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAU
GCAACGCGAAGAACCUUACCUGGUCUUGACAUCCACGGAAGUUUUCAGAGAUGAGAAUGUGCCUUCGGGAACCGUGAGAC
AGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCCUUUGU
UGCCAGCGGUCCGGCCGGGAACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGGGGAUGACGUCAAGUCAUCAU
GGCCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGACCUCA
UAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCAGAAUG
CCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGUAGCUU
AACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUAACAAGGUAACCGUAGGGGAACCUGCG
GUUGGAUCACCUCCU
>URS00002A80E2_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GCGGGAAUAGCUCAGUUGGUAGAGCACGACCUUGCCAAGGUCGGGGUCGCGAGUUCGAGUCUCGUUUCCCGCU
>URS0000092A1D_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GUGGCUAUAGCUCAGUUGGUAGAGCCCUGGAUUGUGAUUCCAGUUGUCGUGGGUUCGAAUCCCAUUAGCCACC
>URS000097169C_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial small subunit ribosomal RNA
AAAUUGAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAAC
AGCUUGCUGUUUCGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCUGAUGGAGGGGGAUAACUACUGGA
AACGGUAGCUAAUACCGCAUAACGUCGCAAGACCAAAGAGGGGGACCUUCGGGCCUCUUGCCAUCAGAUGUGCCCAGAUG
GGAUUAGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGA
ACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGC
CGCGUGUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUUG
ACGUUACCCGCAGAAGAAGC
>URS000097B1E7_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial small subunit ribosomal RNA
AAAUUGAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAGC
AGCUUGCUGCUUCGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAGCUGCCUGAUGGAGGGGGAUAACUACUGGA
AACGGUAGCUAAUACCGCAUAAUGUCGCAAGACCAAAGAGGGGGACCUUCGGGCCUCUUGCCAUCGGAUGUGCCCAGAUG
GGAUUAGCUUGUUGGUGGGGUAACGGCUCACCAAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGA
ACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGC
CGCGUGUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUU
GACGUUACCCGCAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAA
UUACUGGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGU
>URS0000022B8C_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GCUCAAGUAGUUAAAAAUGCAUUAACAUCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCGGCA
>URS0000022B8C_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GCUCAAGUAGUUAAAAAUGCAUUAACAUCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCGGCA
>URS0000022B8C_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GCUCAAGUAGUUAAAAAUGCAUUAACAUCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCGGCA
>URS0000382173_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GCUGAUAUAGCUCAGUUGGUAGAGCGCACCCUUGGUAAGGGUGAGGUCGGCAGUUCGAAUCUGCCUAUCAGCA
>URS000005EC4C_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GUCCUCUUAGUUAAAUGGAUAUAACGAGCCCCUCCUAAGGGCUAAUUGCAGGUUCGAUUCCUGCAGGGGACA
>URS000030BE1E_879462 Escherichia coli str. K-12 substr. MG1655star 5S ribosomal RNA
UCUGGCGGCAGUAGCGCGGUGGUCCCACCUGACCCCAUGCCGAACUCAGAAGUGAAACGCCGUAGCGCCGAUGGUAGUGU
GGGGUCUCCCCAUGCGAGAGUAGGGAACUGCCAGAC
>URS000002FD0D_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GCGUUCAUAGCUCAGUUGGUUAGAGCACCACCUUGACAUGGUGGGGGUCGUUGGUUCGAGUCCAAUUGAACGCA
>URS0000266ADF_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GCUGAUAUGGCUCAGUUGGUAGAGCGCACCCUUGGUAAGGGUGAGGUCCCCAGUUCGACUCUGGGUAUCAGCA
>URS0000905C12_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial small subunit ribosomal RNA
UCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCCUUUGUUGCCAGCGGUCCGGCCGGG
AACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGGGGAUGACGUCAAGUCAUCAUGGCCCUUACGACCAGGGCU
ACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGACCUCAUAAAGUGCGUCGUAGUCCG
GAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCAGAAUGCCACGGUGAAUACGUUCCC
GGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGUAGCUUAACCUUCGGGAGGGCGCUU
ACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUAACAAGGUAACCGUAGGGGAACCUGCGGUUGGAUCACCUCCUUA
>URS000033A7DD_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GCGUCCGUAGCUCAGUUGGUUAGAGCACCACCUUGACAUGGUGGGGGUCGGUGGUUCGAGUCCACUCGGACGCA
>URS000090CA34_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial large subunit ribosomal RNA
CUGCUCCUAGUACGAGAGGACCGGAGUGGACGCAUCACUGGUGUCGGGUUGUCAUGCCAAUGGCACUGCCCGUAGCUAAA
UGCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCACGAAACUUGCCCCGAGAUGAGUUCUCCCUGACCCUUUAAGGGUCCU
GAAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGCGCAGCGAUGCGUUGAGCUAACCGGUACUAAUGAA
CCGUGAGGCUUAACCUU
>URS00002A80E2_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GCGGGAAUAGCUCAGUUGGUAGAGCACGACCUUGCCAAGGUCGGGGUCGCGAGUUCGAGUCUCGUUUCCCGCU
>URS0000092A1D_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GUGGCUAUAGCUCAGUUGGUAGAGCCCUGGAUUGUGAUUCCAGUUGUCGUGGGUUCGAAUCCCAUUAGCCACC
>URS000009C1E2_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GCCGAAGUGGCGAAAUCGGUAGACGCAGUUGAUUCAAAAUCAACCGUAGAAAUACGUGCCGGUUCGAGUCCGGCCUUCGG
CA
>URS0000566AAD_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GCCCGGAUGGUGGAAUCGGUAGACACAAGGGAUUUAAAAUCCCUCGGCGUUCGCGCUGUGCGGGUUCAAGUCCCGCUCCG
GGUA
>URS00000672E8_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GCGGGCGUAGUUCAAUGGUAGAACGAGAGCUUCCCAAGCUCUAUACGAGGGUUCGAUUCCCUUCGCCCGCU
>URS00003A2B7A_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GCGAAGGUGGCGGAAUUGGUAGACGCGCUAGCUUCAGGUGUUAGUGUUCUUACGGACGUGGGGGUUCAAGUCCCCCCCCU
CGCA
>URS000033A7DD_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GCGUCCGUAGCUCAGUUGGUUAGAGCACCACCUUGACAUGGUGGGGGUCGGUGGUUCGAGUCCACUCGGACGCA
>URS000030BE1E_316385 Escherichia coli str. K-12 substr. DH10B 5S ribosomal RNA
UCUGGCGGCAGUAGCGCGGUGGUCCCACCUGACCCCAUGCCGAACUCAGAAGUGAAACGCCGUAGCGCCGAUGGUAGUGU
GGGGUCUCCCCAUGCGAGAGUAGGGAACUGCCAGAC
>URS000057DE4D_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GGUGGGGUUCCCGAGCGGCCAAAGGGAGCAGACUGUAAAUCUGCCGUCAUCGACUUCGAAGGUUCGAAUCCUUCCCCCAC
CA
>URS000057DE4D_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GGUGGGGUUCCCGAGCGGCCAAAGGGAGCAGACUGUAAAUCUGCCGUCAUCGACUUCGAAGGUUCGAAUCCUUCCCCCAC
CA
>URS000054897F_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GGGGCUAUAGCUCAGCUGGGAGAGCGCUUGCAUGGCAUGCAAGAGGUCAGCGGUUCGAUCCCGCUUAGCUCCA
>URS000054897F_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GGGGCUAUAGCUCAGCUGGGAGAGCGCUUGCAUGGCAUGCAAGAGGUCAGCGGUUCGAUCCCGCUUAGCUCCA
>URS0000619CBC_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GCGAAGGUGGCGGAAUUGGUAGACGCGCUAGCUUCAGGUGUUAGUGUCCUUACGGACGUGGGGGUUCAAGUCCCCCCCCU
CGCA
>URS0000457934_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GCGCCCUUAGCUCAGUUGGAUAGAGCAACGACCUUCUAAGUCGUGGGCCGCAGGUUCGAAUCCUGCAGGGCGCG
>URS0000434EAF_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GUCCCCUUCGUCUAGAGGCCCAGGACACCGCCCUUUCACGGCGGUAACAGGGGUUCGAAUCCCCUAGGGGACG
>URS0000434EAF_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GUCCCCUUCGUCUAGAGGCCCAGGACACCGCCCUUUCACGGCGGUAACAGGGGUUCGAAUCCCCUAGGGGACG
>URS000040CF9C_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GGAGAGAUGCCGGAGCGGCUGAACGGACCGGUCUCGAAAACCGGAGUAGGGGCAACUCUACCGGGGGUUCAAAUCCCCCU
CUCUCCG
>URS0000422428_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GGCUACGUAGCUCAGUUGGUUAGAGCACAUCACUCAUAAUGAUGGGGUCACAGGUUCGAAUCCCGUCGUAGCCA
>URS00003B7AB3_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GGUGGGGUUCCCGAGCGGCCAAAGGGAGCAGACUGUAAAUCUGCCGUCACAGACUUCGAAGGUUCGAAUCCUUCCCCCAC
CA
>URS000074E529_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial small subunit ribosomal RNA
AAGAAGUAGGUAGCUUAACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUAACAAGGUAAC
CGUAGGGGAACCUGCGGUUGGAUCACCUCCUUA
>URS000040CF9C_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GGAGAGAUGCCGGAGCGGCUGAACGGACCGGUCUCGAAAACCGGAGUAGGGGCAACUCUACCGGGGGUUCAAAUCCCCCU
CUCUCCG
>URS00005A1717_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GGGGCUAUAGCUCAGCUGGGAGAGCGCCUGCUUUGCACGCAGGAGGUCUGCGGUUCGAUCCCGCAUAGCUCCA
>URS0000689350_316407 Escherichia coli str. K-12 substr. W3110 tRNA
CGCGGGGUGGAGCAGCCUGGUAGCUCGUCGGGCUCAUAACCCGAAGAUCGUCGGUUCAAAUCCGGCCCCCGCAA
>URS0000689350_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
CGCGGGGUGGAGCAGCCUGGUAGCUCGUCGGGCUCAUAACCCGAAGAUCGUCGGUUCAAAUCCGGCCCCCGCAA
>URS000009C1E2_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GCCGAAGUGGCGAAAUCGGUAGACGCAGUUGAUUCAAAAUCAACCGUAGAAAUACGUGCCGGUUCGAGUCCGGCCUUCGG
CA
>URS00005F9558_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GGUGAGGUGUCCGAGUGGCUGAAGGAGCACGCCUGGAAAGUGUGUAUACGGCAACGUAUCGGGGGUUCGAAUCCCCCCCU
CACCG
>URS00006A19BA_316407 Escherichia coli str. K-12 substr. W3110 sok antitoxin
GGGUGCCUGAAGCUUUCCGGUUUCAGGUUUACUCUGAGGUCUGGAAAGAUGAAGCCCCAGGAGAUAUUUCUAUCAACCCU
GGGGCUGCCACUCCAAACCCGAACAAUUUGGAUGGUAGUCCCUUCUUCGCAUGGAGGCAAUAUAAACAUG
>URS00000773A8_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GCCGAUAUAGCUCAGUUGGUAGAGCAGCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCGGCA
>URS000091D383_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial large subunit ribosomal RNA
GGUUGUCAUGCCAAUGGCACUGCCGGUAGCUAAUGCGGAAGAGAUAAGUGCUGAAGCAUCUAAGCACGAAACUUGCCCCG
AGAUGAGUUCUCCCUGACUCCUUGAGAGUCCUGAAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGCGC
AGCGAUGCGUUGAGCUAACCGGUACUAAUGAACCGUGAGGCUUAACCUU
>URS00006BE6A2_879462 Escherichia coli str. K-12 substr. MG1655star sok antitoxin
GGGUGCUUGAGGCUGUCUGUCUCAGGCAUUAGCUGAACGGCAGAUAGAGAAAAGCCCCGAGUGAUAUUUUACCAUCAACC
CGAGGCCUCCUAUAUGCUGAACACAUGUAGAGUGCCUCUUACUGACCGUAAGGUCAAGGAGAAGAGAGCAAUG
>URS000039990D_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GGCGCGUUAACAAAGCGGUUAUGUAGCGGAUUGCAAAUCCGUCUAGUCCGGUUCGACUCCGGAACGCGCCU
>URS000039990D_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GGCGCGUUAACAAAGCGGUUAUGUAGCGGAUUGCAAAUCCGUCUAGUCCGGUUCGACUCCGGAACGCGCCU
>URS0000566AAD_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GCCCGGAUGGUGGAAUCGGUAGACACAAGGGAUUUAAAAUCCCUCGGCGUUCGCGCUGUGCGGGUUCAAGUCCCGCUCCG
GGUA
>URS0000926307_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial small subunit ribosomal RNA
UCAUCAUGGCCCUUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGC
GGACCUCAUAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGA
UCAGAAUGCCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUA
GGUAGCUUAACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUAACAAGGUAACCGUAGGGG
AACCUGCGGUUGGAUCACCUCCUUA
>URS000070682D_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GCAUCCGUAGUUCAGCUGGAUAGAGUACUCGGCUACGAACCGAGCGGUCGGAGGUUCGAAUCCUCCCGGAUGCA
>URS00003DC4B1_879462 Escherichia coli str. K-12 substr. MG1655star 5S ribosomal RNA
CCUGGCGGCCGUAGCGCGGUGGUCCCACCUGACCCCAUGCCGAACUCAGAAGUGAAACGCCGUAGCGCCGAUGGUAGUGU
GGGGUCUCCCCAUGCGAGAGUAGGGAACUGCCAGGC
>URS0000457934_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GCGCCCUUAGCUCAGUUGGAUAGAGCAACGACCUUCUAAGUCGUGGGCCGCAGGUUCGAAUCCUGCAGGGCGCG
>URS00000C9206_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GCGGGAGUGGCGAAAUUGGUAGACGCACCAGAUUUAGGUUCUGGCGCCGCAAGGUGUGCGAGUUCAAGUCUCGCCUCCCG
CA
>URS00000C9206_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GCGGGAGUGGCGAAAUUGGUAGACGCACCAGAUUUAGGUUCUGGCGCCGCAAGGUGUGCGAGUUCAAGUCUCGCCUCCCG
CA
>URS00000CAECD_316407 Escherichia coli str. K-12 substr. W3110 tRNA
AGGGGCGUAGUUCAAUUGGUAGAGCACCGGUCUCCAAAACCGGGUGUUGGGAGUUCGAGUCUCUCCGCCCCUG
>URS0000097FC8_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GGGUCGUUAGCUCAGUUGGUAGAGCAGUUGACUUUUAAUCAAUUGGUCGCAGGUUCGAAUCCUGCACGACCCA
>URS00005CE4AE_879462 Escherichia coli str. K-12 substr. MG1655star rdlD antitoxin
GUCUGGUUUCAAGAUUAGCCCCCGUUCUGUUGUCAGGUUUUACCUCUCAACGUGCGGGGGUUUUCU
>URS00006A19BA_879462 Escherichia coli str. K-12 substr. MG1655star sok antitoxin
GGGUGCCUGAAGCUUUCCGGUUUCAGGUUUACUCUGAGGUCUGGAAAGAUGAAGCCCCAGGAGAUAUUUCUAUCAACCCU
GGGGCUGCCACUCCAAACCCGAACAAUUUGGAUGGUAGUCCCUUCUUCGCAUGGAGGCAAUAUAAACAUG
>URS00006A19BA_316385 Escherichia coli str. K-12 substr. DH10B sok antitoxin
GGGUGCCUGAAGCUUUCCGGUUUCAGGUUUACUCUGAGGUCUGGAAAGAUGAAGCCCCAGGAGAUAUUUCUAUCAACCCU
GGGGCUGCCACUCCAAACCCGAACAAUUUGGAUGGUAGUCCCUUCUUCGCAUGGAGGCAAUAUAAACAUG
>URS0000097FC8_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GGGUCGUUAGCUCAGUUGGUAGAGCAGUUGACUUUUAAUCAAUUGGUCGCAGGUUCGAAUCCUGCACGACCCA
>URS0000689350_316385 Escherichia coli str. K-12 substr. DH10B tRNA
CGCGGGGUGGAGCAGCCUGGUAGCUCGUCGGGCUCAUAACCCGAAGAUCGUCGGUUCAAAUCCGGCCCCCGCAA
>URS000009C1E2_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GCCGAAGUGGCGAAAUCGGUAGACGCAGUUGAUUCAAAAUCAACCGUAGAAAUACGUGCCGGUUCGAGUCCGGCCUUCGG
CA
>URS00003A2B7A_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GCGAAGGUGGCGGAAUUGGUAGACGCGCUAGCUUCAGGUGUUAGUGUUCUUACGGACGUGGGGGUUCAAGUCCCCCCCCU
CGCA
>URS000005EC4C_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GUCCUCUUAGUUAAAUGGAUAUAACGAGCCCCUCCUAAGGGCUAAUUGCAGGUUCGAUUCCUGCAGGGGACA
>URS00002A80E2_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GCGGGAAUAGCUCAGUUGGUAGAGCACGACCUUGCCAAGGUCGGGGUCGCGAGUUCGAGUCUCGUUUCCCGCU
>URS0000945889_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial large subunit ribosomal RNA
CUCUUGAUCGAAGCCCCGGUAAACGGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCC
GACCUGCACGAAUGGCGUAAUGAUGGCCAGGCUGUCUCCACCCGAGACUCAGUGAAAUUGAACUCGCUGUGAAGAUGCAG
UGUACCCGCGGCAAGACGGAAAGACCCCGUGAACCUUUACUAUAGCUUGACACUGAACAUUGAGCCUUGAUGUGUAGGAU
AGGUGGGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGAGCCGACCUUGAAAUACCACCCUUUAAUGUUUGAUGUUCUA
ACGUUGACCCGUAAUCCGGGUUGCGG
>URS00006E34B0_316385 Escherichia coli str. K-12 substr. DH10B sok antitoxin
GGGUGCUUGAGACUGUUUGUCUCAGGUAUUCACCGAAAGGCAGACAGAGAAAAGCCCCACCUGACUAUAAAUCAAAGUUU
GUACUGACCCCAAAAAGUUGGACAGUUAAACACGAGGCAUAUAGG
>URS00000CC6DB_316385 Escherichia coli str. K-12 substr. DH10B RNA-OUT
UCGCACAUUUUGUUGUCUGAUUAUUGAUUUUUGGCGAAACCAUUUGAUCAUAUGACAAGAUGUGUAUCUA
>URS0000434EAF_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GUCCCCUUCGUCUAGAGGCCCAGGACACCGCCCUUUCACGGCGGUAACAGGGGUUCGAAUCCCCUAGGGGACG
>URS000005EC4C_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GUCCUCUUAGUUAAAUGGAUAUAACGAGCCCCUCCUAAGGGCUAAUUGCAGGUUCGAUUCCUGCAGGGGACA
>URS0000946F29_316407 Escherichia coli str. K-12 substr. W3110 Archaeal small subunit ribosomal RNA
GAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAGAAGCUU
GCUUCUUUGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCUGAUGGAGGGGGAUAACUACUGGAAACGG
UAGCUAAUACCGCAUAACGUCGCAAGACCAAAGAGGGGGACCUUCGGGCCUCUUGCCAUCGGAUGUGCCCAGAUGGGAUU
AGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGAACUGA
GACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGCCGCGU
GUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUUGACGU
UACCCGCAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAAUUACU
GGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCCGGGCUCAACCUGGGAACUGCAUCUGAUACUG
GCAAGCUUGAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACCGGUGG
CGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUC
CACGCCGUAAACGAUGUCGACUUGGAGGUUGUGCCCUUGAGGCGUGGCUUCCGGAGCUAACGCGUUAAGUCGACCGCCUG
GGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAU
GCAACGCGAAGAACCUUACCUGGUCUUGACAUCCACGGAAGUUUUCAGAGAUGAGAAUGUGCCUUCGGGAACCGUGAGAC
AGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCCUUUGU
UGCCAGCGGUCCGGCCGGGAACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGGGGAUGACGUCAAGUCAUCAU
GGCCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGACCUCA
UAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCAGAAUG
CCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGUAGCUU
AACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUAACAAGGUAACCGUAGGGGAACCUGCG
GUUGGAUCACCUCCU
>URS000061DFCE_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GGUGAGGUGGCCGAGAGGCUGAAGGCGCUCCCCUGCUAAGGGAGUAUGCGGUCAAAAGCUGCAUCCGGGGUUCGAAUCCC
CGCCUCACCG
>URS0000957E26_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial large subunit ribosomal RNA
GGUUAAGCGACUAAGCGUACACGGUGGAUGCCCUGGCAGUCAGAGGCGAUGAAGGACGUGCUAAUCUGCGAUAAGCGUCG
GUAAGGUGAUAUGAACCGUUAUAACCGGCGAUUUCCGAAUGGGGAAACCCAGUGUGUUUCGACACACUAUCAUUAACUGA
AUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCCC
AGUAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCUGAAUCAGUAUGUGUGUUAGUGGAAGCGUCUGGAAAGGCGCGCGA
UACAGGGUGACAGCCCCGUACACAAAAAUGCACAUAUUGUGAGCUCGAUGAGUAGGGCGGGACACGUGGUAUCCUGUCUG
AAUAUGGGGGGACCAUCCUCCAAGGCUAAAUACUCCUGACUGACCGAUAGUGAACCAGUACCGUGAGGGAAAGGCGAAAA
GAACCCCGGCGAGGGGAGUGAAAAAGAACCUGAAACCGUGUACGUACAAGCAGUGGGAGCACGCUUAGGCGUGUGACUGC
GUACCUUUUGUAUAAUGGGUCAGCGACUUAUAUUCUGUAGCAAGGUUAACCGAAUAGGGGAGCCGAAGGGAAACCGAGUC
UUAACUGGGCGUUAAGUUGCAGGGUAUAGACCCGAAACCCGGUGAUCUAGCCAUGGGCAGGUUGAAGGUUGGGUAACACU
AACUGGAGG
>URS0000566AAD_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GCCCGGAUGGUGGAAUCGGUAGACACAAGGGAUUUAAAAUCCCUCGGCGUUCGCGCUGUGCGGGUUCAAGUCCCGCUCCG
GGUA
>URS0000230EE1_316407 Escherichia coli str. K-12 substr. W3110 tRNA
CGGCACGUAGCGCAGCCUGGUAGCGCACCGUCAUGGGGUGUCGGGGGUCGGAGGUUCAAAUCCUCUCGUGCCGA
>URS0000266ADF_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GCUGAUAUGGCUCAGUUGGUAGAGCGCACCCUUGGUAAGGGUGAGGUCCCCAGUUCGACUCUGGGUAUCAGCA
>URS000020E66C_316407 Escherichia coli str. K-12 substr. W3110 SymR antitoxin
AGUCAUAACUGCUAUUCUCCAGGAAUAGUGAUUGUGAUUAGCGAUGCGGGUGUGUUGGCGCACAUCCGCACCGCGCU
>URS000002D309_879462 Escherichia coli str. K-12 substr. MG1655star 5S ribosomal RNA
CCUGGCGGCAGUAGCGCGGUGGUCCCACCUGACCCCAUGCCGAACUCAGAAGUGAAACGCCGUAGCGCCGAUGGUAGUGU
GGGGUCUCCUCAUGCGAGAGUAGGGAACUGCCAGGC
>URS000097FAD9_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial large subunit ribosomal RNA
GGUUAAGCGACUAAGCGUACACGGUGGAUGCCCUGGCAGUCAGAGGCGAUGAAGGACGUGCUAAUCUGCGAUAAGCGUCG
GUAAGGUGAUAUGAACCGUUAUAACCGGCGAUUUCCGAAUGGGGAAACCCAGUGUGUUUCGACACACUAUCAUUAACUGA
AUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCCC
AGUAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCUGAAUCAGUGUGUGUGUUAGUGGAAGCGUCUGGAAAGGCGCGCGA
UACAGGGUGACAGCCCGUACACAAAAUGCACAUGCUGUGAGCUCGAUGAGUAGGGCGGGACACGUGGA
>URS0000092A1D_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GUGGCUAUAGCUCAGUUGGUAGAGCCCUGGAUUGUGAUUCCAGUUGUCGUGGGUUCGAAUCCCAUUAGCCACC
>URS000092F3F5_316385 Escherichia coli str. K-12 substr. DH10B Archaeal small subunit ribosomal RNA
GAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAACAGCUU
GCUGUUUCGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCUGAUGGAGGGGGAUAACUACUGGAAACGG
UAGCUAAUACCGCAUAACGUCGCAAGACCAAAGAGGGGGACCCUCGGGCCUCUUGCCAUCGGAUGUGCCCAGAUGGGAUU
AGCUUGUUGGUGGGGUAACGGCUCACCAAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGAACUGA
GACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGCCGCGU
GUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUUGACGU
UACCCGCAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAAUUACU
GGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCCGGGCUCAACCUGGGAACUGCAUCUGAUACUG
GCAAGCUUGAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACCGGUGG
CGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUC
CACGCCGUAAACGAUGUCGACUUGGAGGUUGUGCCCUUGAGGCGUGGCUUCCGGAGCUAACGCGUUAAGUCGACCGCCUG
GGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAU
GCAACGCGAAGAACCUUACCUGGUCUUGACAUCCACGGAAGUUUUCAGAGAUGAGAAUGUGCCUUCGGGAACCGUGAGAC
AGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCCUUUGU
UGCCAGCGGUCCGGCCGGGAACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGGGGAUGACGUCAAGUCAUCAU
GGCCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGACCUCA
UAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCAGAAUG
CCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGUAGCUU
AACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUAACAAGGUAACCGUAGGGGAACCUGCG
GUUGGAUCACCUCCU
>URS000035F456_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GGCCCCUUAGCUCAGUGGUUAGAGCAGGCGACUCAUAAUCGCUUGGUCGCUGGUUCAAGUCCAGCAGGGGCCA
>URS000035F456_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GGCCCCUUAGCUCAGUGGUUAGAGCAGGCGACUCAUAAUCGCUUGGUCGCUGGUUCAAGUCCAGCAGGGGCCA
>URS00000CC6DB_83333 Escherichia coli K-12 RNA-OUT
UCGCACAUUUUGUUGUCUGAUUAUUGAUUUUUGGCGAAACCAUUUGAUCAUAUGACAAGAUGUGUAUCUA
>URS000090B230_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial small subunit ribosomal RNA
AAAUUGAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAGA
AGCUUGCUUCUUUGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCUGAUGGAGGGGGGAUAACUACUGG
AAACGGUAGCUAAUACCGCAUAACGUCGCAAGACCAAAGAGGGGGGACCUUCGGGCCGUCUUGCCAUCGGAUGUGCCCAG
AUGGGAUUAGGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUGG
>URS000033A7DD_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GCGUCCGUAGCUCAGUUGGUUAGAGCACCACCUUGACAUGGUGGGGGUCGGUGGUUCGAGUCCACUCGGACGCA
>URS00009191B8_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial small subunit ribosomal RNA
AAAUUGAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGAAGAA
GCUUGCUUCUUUGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCUGAUGGAGGGGAUAACUACUGG
>URS00004F63F7_316385 Escherichia coli str. K-12 substr. DH10B RNA-OUT
UCGCACAUCUUGUUGUCUGAUUAUUGAUUUUUCGCGAAACCAUUUGAUCAUAUGACAAGAUGUGUAUCCA
>URS000039990D_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GGCGCGUUAACAAAGCGGUUAUGUAGCGGAUUGCAAAUCCGUCUAGUCCGGUUCGACUCCGGAACGCGCCU
>URS000002FD0D_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GCGUUCAUAGCUCAGUUGGUUAGAGCACCACCUUGACAUGGUGGGGGUCGUUGGUUCGAGUCCAAUUGAACGCA
>URS00000CAECD_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
AGGGGCGUAGUUCAAUUGGUAGAGCACCGGUCUCCAAAACCGGGUGUUGGGAGUUCGAGUCUCUCCGCCCCUG
>URS0000097FC8_83333 Escherichia coli K-12 tRNA
GGGUCGUUAGCUCAGUUGGUAGAGCAGUUGACUUUUAAUCAAUUGGUCGCAGGUUCGAAUCCUGCACGACCCA
>URS00005F9558_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GGUGAGGUGUCCGAGUGGCUGAAGGAGCACGCCUGGAAAGUGUGUAUACGGCAACGUAUCGGGGGUUCGAAUCCCCCCCU
CACCG
>URS0000931995_316407 Escherichia coli str. K-12 substr. W3110 Archaeal small subunit ribosomal RNA
GAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAGAAGCUU
GCUUCUUUGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCUGAUGGAGGGGGAUAACUACUGGAAACGG
UAGCUAAUACCGCAUAACGUCGCAAGACCAAAGAGGGGUACCUUCGGGCCUCUUGCCAUCGGAUGUGCCCAGAUGGGAUU
AGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGAACUGA
GACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGCCGCGU
GUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUUGACGU
UACCCGCAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAAUUACU
GGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCCGGGCUCAACCUGGGAACUGCAUCUGAUACUG
GCAAGCUUGAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACCGGUGG
CGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUC
CACGCCGUAAACGAUGUCGACUUGGAGGUUGUGCCCUUGAGGCGUGGCUUCCGGAGCUAACGCGUUAAGUCGACCGCCUG
GGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAU
GCAACGCGAAGAACCUUACCUGGUCUUGACAUCCACGGAAGUUUUCAGAGAUGAGAAUGUGCCUUCGGGAACCGUGAGAC
AGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCCUUUGU
UGCCAGCGGUCCGGCCGGGAACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGGGGAUGACGUCAAGUCAUCAU
GGCCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGACCUCA
UAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCAGAAUG
CCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGUAGCUU
AACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUAACAAGGUAACCGUAGGGGAACCUGCG
GUUGGAUCACCUCCU
>URS00000CAECD_316385 Escherichia coli str. K-12 substr. DH10B tRNA
AGGGGCGUAGUUCAAUUGGUAGAGCACCGGUCUCCAAAACCGGGUGUUGGGAGUUCGAGUCUCUCCGCCCCUG
>URS00006BE6A2_316407 Escherichia coli str. K-12 substr. W3110 sok antitoxin
GGGUGCUUGAGGCUGUCUGUCUCAGGCAUUAGCUGAACGGCAGAUAGAGAAAAGCCCCGAGUGAUAUUUUACCAUCAACC
CGAGGCCUCCUAUAUGCUGAACACAUGUAGAGUGCCUCUUACUGACCGUAAGGUCAAGGAGAAGAGAGCAAUG
>URS000090EDE3_316407 Escherichia coli str. K-12 substr. W3110 Archaeal small subunit ribosomal RNA
GAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAGCAGCUU
GCUGCUUCGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAGCUGCCUGAUGGAGGGGGAUAACUACUGGAAACGG
UAGCUAAUACCGCAUAAUGUCGCAAGACCAAAGAGGGGGACCUUCGGGCCUCUUGCCAUCGGAUGUGCCCAGAUGGGAUU
AGCUUGUUGGUGGGGUAACGGCUCACCAAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGAACUGA
GACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGCCGCGU
GUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUUGACGU
UACCCGCAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAAUUACU
GGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCCGGGCUCAACCUGGGAACUGCAUCUGAUACUG
GCAAGCUUGAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACCGGUGG
CGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUC
CACGCCGUAAACGAUGUCGACUUGGAGGUUGUGCCCUUGAGGCGUGGCUUCCGGAGCUAACGCGUUAAGUCGACCGCCUG
GGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAU
GCAACGCGAAGAACCUUACCUGGUCUUGACAUCCACGGAAGUUUUCAGAGAUGAGAAUGUGCCUUCGGGAACCGUGAGAC
AGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCCUUUGU
UGCCAGCGGUCCGGCCGGGAACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGGGGAUGACGUCAAGUCAUCAU
GGCCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGACCUCA
UAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCAGAAUG
CCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGUAGCUU
AACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUAACAAGGUAACCGUAGGGGAACCUGCG
GUUGGAUCACCUCCU
>URS000002FD0D_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GCGUUCAUAGCUCAGUUGGUUAGAGCACCACCUUGACAUGGUGGGGGUCGUUGGUUCGAGUCCAAUUGAACGCA
>URS00006E34B0_316407 Escherichia coli str. K-12 substr. W3110 sok antitoxin
GGGUGCUUGAGACUGUUUGUCUCAGGUAUUCACCGAAAGGCAGACAGAGAAAAGCCCCACCUGACUAUAAAUCAAAGUUU
GUACUGACCCCAAAAAGUUGGACAGUUAAACACGAGGCAUAUAGG
>URS00006E34B0_879462 Escherichia coli str. K-12 substr. MG1655star sok antitoxin
GGGUGCUUGAGACUGUUUGUCUCAGGUAUUCACCGAAAGGCAGACAGAGAAAAGCCCCACCUGACUAUAAAUCAAAGUUU
GUACUGACCCCAAAAAGUUGGACAGUUAAACACGAGGCAUAUAGG
>URS0000097FC8_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GGGUCGUUAGCUCAGUUGGUAGAGCAGUUGACUUUUAAUCAAUUGGUCGCAGGUUCGAAUCCUGCACGACCCA
>URS0000625B83_316385 Escherichia coli str. K-12 substr. DH10B sok antitoxin
GGGUGCCUGAGACUUUCUGUUUUCAGGCUAACCGGGAAUCAGAAAGACGAAGGCCCCGACCGAUAUUUCUAUCAACCGAG
GCCAACGAAUGAACCUAGCAAUUCAGAUCUUAGCCUCUUACCCGCCAUCCGGCAAGGAGAAAGGCUAUGAAG
>URS00005F9558_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GGUGAGGUGUCCGAGUGGCUGAAGGAGCACGCCUGGAAAGUGUGUAUACGGCAACGUAUCGGGGGUUCGAAUCCCCCCCU
CACCG
>URS000061DFCE_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GGUGAGGUGGCCGAGAGGCUGAAGGCGCUCCCCUGCUAAGGGAGUAUGCGGUCAAAAGCUGCAUCCGGGGUUCGAAUCCC
CGCCUCACCG
>URS0000625B83_316407 Escherichia coli str. K-12 substr. W3110 sok antitoxin
GGGUGCCUGAGACUUUCUGUUUUCAGGCUAACCGGGAAUCAGAAAGACGAAGGCCCCGACCGAUAUUUCUAUCAACCGAG
GCCAACGAAUGAACCUAGCAAUUCAGAUCUUAGCCUCUUACCCGCCAUCCGGCAAGGAGAAAGGCUAUGAAG
>URS00006BE6A2_316385 Escherichia coli str. K-12 substr. DH10B sok antitoxin
GGGUGCUUGAGGCUGUCUGUCUCAGGCAUUAGCUGAACGGCAGAUAGAGAAAAGCCCCGAGUGAUAUUUUACCAUCAACC
CGAGGCCUCCUAUAUGCUGAACACAUGUAGAGUGCCUCUUACUGACCGUAAGGUCAAGGAGAAGAGAGCAAUG
>URS0000382173_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GCUGAUAUAGCUCAGUUGGUAGAGCGCACCCUUGGUAAGGGUGAGGUCGGCAGUUCGAAUCUGCCUAUCAGCA
>URS000002D309_316385 Escherichia coli str. K-12 substr. DH10B 5S ribosomal RNA
CCUGGCGGCAGUAGCGCGGUGGUCCCACCUGACCCCAUGCCGAACUCAGAAGUGAAACGCCGUAGCGCCGAUGGUAGUGU
GGGGUCUCCUCAUGCGAGAGUAGGGAACUGCCAGGC
>URS000061DFCE_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GGUGAGGUGGCCGAGAGGCUGAAGGCGCUCCCCUGCUAAGGGAGUAUGCGGUCAAAAGCUGCAUCCGGGGUUCGAAUCCC
CGCCUCACCG
>URS00002A51CF_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GCGGGCAUCGUAUAAUGGCUAUUACCUCAGCCUUCCAAGCUGAUGAUGCGGGUUCGAUUCCCGCUGCCCGCU
>URS00000C9206_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GCGGGAGUGGCGAAAUUGGUAGACGCACCAGAUUUAGGUUCUGGCGCCGCAAGGUGUGCGAGUUCAAGUCUCGCCUCCCG
CA
>URS0000625B83_879462 Escherichia coli str. K-12 substr. MG1655star sok antitoxin
GGGUGCCUGAGACUUUCUGUUUUCAGGCUAACCGGGAAUCAGAAAGACGAAGGCCCCGACCGAUAUUUCUAUCAACCGAG
GCCAACGAAUGAACCUAGCAAUUCAGAUCUUAGCCUCUUACCCGCCAUCCGGCAAGGAGAAAGGCUAUGAAG
>URS00009247B1_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial large subunit ribosomal RNA
CGAGCAGAGACGAAAGUCGGUCAUAGUGAUCCGGUGGUCCCGCGUGGAAGGGCCAUCGCUCAACGGAUAAAAGGUACGCC
GGGGAUAACAGGCUGAUGACCCCCAAGAGUCCAUAUCGACGGGGUUGUUUGGCACCUCGAUGUCGACUCAUCGCAUCCUG
GGGCUGGAGCAGGUCCCAAGGGUAUGGCUGUUCGCCAUUUAAAGCGGUACGUGAGUUGGGUUCAGAACGUCGUGAGACAG
UUCGGUCCCUAUCUGCCGUGGG
>URS000035465A_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GCCCGGAUAGCUCAGUCGGUAGAGCAGGGGAUUGAAAAUCCCCGUGUCCUUGGUUCGAUUCCGAGUCCGGGCA
>URS0000297FB5_879462 Escherichia coli str. K-12 substr. MG1655star rdlD antitoxin
GUCUAGAGUCAAGAUUAGCCCCCGUGGUGUUGUCAGGUGCAUACCUGCAACGUGCGGGGGUUUUCU
>URS00001A3D5B_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GGCCCUUUAGCUCAGUGGUUAGAGCAGGCGACUCAUAAUCGCUUGGUCGCUGGUUCAAGUCCAGCAAGGGCCA
>URS000035F456_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GGCCCCUUAGCUCAGUGGUUAGAGCAGGCGACUCAUAAUCGCUUGGUCGCUGGUUCAAGUCCAGCAGGGGCCA
>URS0000AB7A1D_316385 Escherichia coli str. K-12 substr. DH10B Archaeal large subunit ribosomal RNA
AGGUUAAGCGACUAAGCGUACACGGUGGAUGCCCUGGCAGUCAGAGGCGAUGAAGGACGUGCUAAUCUGCGAUAAGCGUC
GGUAAGGUGAUAUGAACCGUUAUAACCGGCGAUUUCCGAAUGGGGAAACCCAGUGUGUUUCGACACACUAUCAUUAACUG
AAUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCC
CAGUAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCUGAAUCAGUGUGUGUGUUAGUGGAAGCGUCUGGAAAGGCGCGCG
AUACAGGGUGACAGCCCCGUACACAAAAAUGCACAUGCUGUGAGCUCGAUGAGUAGGGCGGGACACGUGGUAUCCUGUCU
GAAUAUGGGGGGACCAUCCUCCAAGGCUAAAUACUCCUGACUGACCGAUAGUGAACCAGUACCGUGAGGGAAAGGCGAAA
AGAACCCCGGCGAGGGGAGUGAAAAAGAACCUGAAACCGUGUACGUACAAGCAGUGGGAGCAUGCUUAGGCGUGUGACUG
CGUACCUUUUGUAUAAUGGGUCAGCGACUUAUAUUCUGUAGCAAGGUUAACCGAAUAGGGGAGCCGAAGGGAAACCGAGU
CUUAACUGGGCGUUAAGUUGCAGGGUAUAGACCCGAAACCCGGUGAUCUAGCCAUGGGCAGGUUGAAGGUUGGGUAACAC
UAACUGGAGGACCGAACCGACUAAUGUUGAAAAAUUAGCGGAUGACUUGUGGCUGGGGGUGAAAGGCCAAUCAAACCGGG
AGAUAGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGUGAACUCAUCUCCGGGGGUAGAGCACUGUUUCGGCAAG
GGGGUCAUCCCGACUUACCAACCCGAUGCAAACUGCGAAUACCGGAGAAUGUUAUCACGGGAGACACACGGCGGGUGCUA
ACGUCCGUCGUGAAGAGGGAAACAACCCAGACCGCCAGCUAAGGUCCCAAAGUCAUGGUUAAGUGGGAAACGAUGUGGGA
AGGCCCAGACAGCCAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCACUGGUCGAGUCGGCCU
GCGCGGAAGAUGUAACGGGGCUAAACCAUGCACCGAAGCUGCGGCAGCGACGCUUAUGCGUUGUUGGGUAGGGGAGCGUU
CUGUAAGCCUGUGAAGGUGUACUGUGAGGUAUGCUGGAGGUAUCAGAAGUGCGAAUGCUGACAUAAGUAACGAUAAAGCG
GGUGAAAAGCCCGCUCGCCGGAAGACCAAGGGUUCCUGUCCAACGUUAAUCGGGGCAGGGUGAGUCGACCCCUAAGGCGA
GGCCGAAAGGCGUAGUCGAUGGGAAACAGGUUAAUAUUCCUGUACUUGGUGUUACUGCGAAGGGGGGACGGAGAAGGCUA
UGUUGGCCGGGCGACGGUUGUCCCGGUUUAAGCGUGUAGGCUGGUUUUCCAGGCAAAUCCGGAAAAUCAAGGCUGAGGCG
UGAUGACGAGGCACUACGGUGCUGAAGCAACAAAUGCCCUGCUUCCAGGAAAAGCCUCUAAGCAUCAGGUAACAUCAAAU
CGUACCCCAAACCGACACAGGUGGUCAGGUAGAGAAUACCAAGGCGCUUGAGAGAACUCGGGUGAAGGAACUAGGCAAAA
UGGUGCCGUAACUUCGGGAGAAGGCACGCUGAUAUGUAGGUGAAGCGACUUGCUCGUGGAGCUGAAAUCAGUCGAAGAUA
CCAGCUGGCUGCAACUGUUUAUUAAAAACACAGCACUGUGCAAACACGAAAGUGGACGUAUACGGUGUGACGCCUGCCCG
GUGCCGGAAGGUUAAUUGAUGGGGUUAGCGCAAGCGAAGCUCUUGAUCGAAGCCCCGGUAAACGGCGGCCGUAACUAUAA
CGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAUGGCGUAAUGAUGGCCAGGCUGUCUCCAC
CCGAGACUCAGUGAAAUUGAACUCGCUGUGAAGAUGCAGUGUACCCGCGGCAAGACGGAAAGACCCCGUGAACCUUUACU
AUAGCUUGACACUGAACAUUGAGCCUUGAUGUGUAGGAUAGGUGGGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGAG
CCGACCUUGAAAUACCACCCUUUAAUGUUUGAUGUUCUAACGUUGACCCGUAAUCCGGGUUGCGGACAGUGUCUGGUGGG
UAGUUUGACUGGGGCGGUCUCCUCCUAAAGAGUAACGGAGGAGCACGAAGGUUGGCUAAUCCUGGUCGGACAUCAGGAGG
UUAGUGCAAUGGCAUAAGCCAGCUUGACUGCGAGCGUGACGGCGCGAGCAGGUGCGAAAGCAGGUCAUAGUGAUCCGGUG
GUUCUGAAUGGAAGGGCCAUCGCUCAACGGAUAAAAGGUACUCCGGGGAUAACAGGCUGAUACCGCCCAAGAGUUCAUAU
CGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCACAUCCUGGGGCUGAAGUAGGUCCCAAGGGUAUGGCUGUUCGCC
AUUUAAAGUGGUACGCGAGCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCCGUGGGCGCUGGAGAACUGA
GGGGGGCUGCUCCUAGUACGAGAGGACCGGAGUGGACGCAUCACUGGUGUUCGGGUUGUCAUGCCAAUGGCACUGCCCGG
UAGCUAAAUGCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCACGAAACUUGCCCCGAGAUGAGUUCUCCCUGACUCCUUG
AGAGUCCUGAAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGCGCAGCGAUGCGUUGAGCUAACCGGUA
CUAAUGAACCGUGAGGCUUAACCU
>URS00001C31F3_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GCCGAGGUGGUGGAAUUGGUAGACACGCUACCUUGAGGUGGUAGUGCCCAAUAGGGCUUACGGGUUCAAGUCCCGUCCUC
GGUA
>URS000000D27B_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GCCGACUUAGCUCAGUAGGUAGAGCAACUGACUUGUAAUCAGUAGGUCACCAGUUCGAUUCCGGUAGUCGGCA
>URS000000D27B_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GCCGACUUAGCUCAGUAGGUAGAGCAACUGACUUGUAAUCAGUAGGUCACCAGUUCGAUUCCGGUAGUCGGCA
>URS000034CDF1_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial antisense RNA HPnc0260
UGUAACAAAGUUGCCAUAGCGAUUCUCCUUCUGAUAACGCAUACGAAGACAGUGUAAAUCUUUUAACGUAUUGGAUACAG
AGAAGAAACAGAGGGAAAAAGGAGAAGACCAGAUUAAGAAAAUCUGGUGCGUCCGAGUGGACUCGAACCACCGACCCCCA
CCA
>URS00001F9150_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GCGCCCGUAGCUCAGCUGGAUAGAGCGCUGCCCUCCGGAGGCAGAGGUCUCAGGUUCGAAUCCUGUCGGGCGCG
>URS0000171184_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GGGUGAUUAGCUCAGCUGGGAGAGCACCUCCCUUACAAGGAGGGGGUCGGCGGUUCGAUCCCGUCAUCACCCA
>URS0000171184_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GGGUGAUUAGCUCAGCUGGGAGAGCACCUCCCUUACAAGGAGGGGGUCGGCGGUUCGAUCCCGUCAUCACCCA
>URS0000297FB5_316385 Escherichia coli str. K-12 substr. DH10B rdlD antitoxin
GUCUAGAGUCAAGAUUAGCCCCCGUGGUGUUGUCAGGUGCAUACCUGCAACGUGCGGGGGUUUUCU
>URS00009624AA_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial large subunit ribosomal RNA
GGUUAAGCGACUAAGCGUACACGGUGGAUGCCCUGGCAGUCAGAGGCGAUGAAGGACGUGCUAAUCUGCGAUAAGCGUCG
GUAAGGUGAUAUGAACCGUUAUAACCGGCGAUUUCCGAAUGGGGAAACCCAGUGUGUUUCGACACACUAUCAUUAACUGA
AUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCCC
AGUAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCUGAAUCAGUGUGUGUGUUAGUGGAAGCGUCUGGAAAGGCGUGCGA
UACAGGGUGACAGCCCCGUACACAAAAAUGCACAUGCUGUGAGCUCGAUGAGUAGGGCGGACACGUGGUAUCCUGUCUGA
AUAU
>URS0000963DB8_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial large subunit ribosomal RNA
UAGGGGAGCGUUCUGUAAGUCUGCGAAGGUGUCUGGUAACGGAUGCUGGAGAUAUCAGAAGUGCGAAUGCUGACAUGAGU
AGCGAUAAAGCGGGUGAAAGGCCCGCUCGCCGAAAGCCCAAGGUUUCCUACGCAACGUUCAUCGGCGUAGGGUGAGUCGG
CUCCUAAGGCGAGGCCGAAAGGCGUAGUCGAUGGGAAACAGGUCAAUAUUCCUGUACUUGGUGUUAC
>URS0000992D8A_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial large subunit ribosomal RNA
GGUUAAGCGACUAAGCGUACACGGUGGAUGCCCUGGCAGUCAGAGGCGAUGAAGGACGUGCUAAUCUGCGAUAAGCGUCG
GUAAGGUGAUAUGAACCGUUAUAACCGGCGAUUUCCGAAUGGGGAAACCCAGUGUGUUUCGACACACUAUCAUUAACUGA
AUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCCC
AGUAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCUGAAUCAGUGUGUGUGUUAGUGGAAGCGUCUGGAAAGGCGCGCGA
UACAGGGUGACAGCCCCGUACACAAAAAUGCACAUGCUGUGAGCUCGAUGAGUAGGGCGGGACACGUGGUAUCCUGU
>URS0000171184_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GGGUGAUUAGCUCAGCUGGGAGAGCACCUCCCUUACAAGGAGGGGGUCGGCGGUUCGAUCCCGUCAUCACCCA
>URS0000220D16_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GGAAGUGUGGCCGAGCGGUUGAAGGCACCGGUCUUGAAAACCGGCGACCCGAAAGGGUUCCAGAGUUCGAAUCUCUGCGC
UUCCG
>URS0000AB8CC7_316407 Escherichia coli str. K-12 substr. W3110 Eukaryotic large subunit ribosomal RNA
AAUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCC
CAGUAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCUGAAUCAGUGUGUGUGUUAGUGGAAGCGUCUGGAAAGGCGUGCG
AUACAGGGUGACAGCCCCGUACACAAAAAUGCACAUGCUGUGAGCUCGAUGAGUAGGGCGGGACACGUGGUAUCCUGUCU
GAAUAUGGGGGGACCAUCCUCCAAGGCUAAAUACUCCUGACUGACCGAUAGUGAACCAGUACCGUGAGGGAAAGGCGAAA
AGAACCCCGGCGAGGGGAGUGAAAAAGAACCUGAAACCGUGUACGUACAAGCAGUGGGAGCACGCUUAGGCGUGUGACUG
CGUACCUUUUGUAUAAUGGGUCAGCGACUUAUAUUCUGUAGCAAGGUUAACCGAAUAGGGGAGCCGAAGGGAAACCGAGU
CUUAACUGGGCGUUAAGUUGCAGGGUAUAGACCCGAAACCCGGUGAUCUAGCCAUGGGCAGGUUGAAGGUUGGGUAACAC
UAACUGGAGGACCGAACCGACUAAUGUUGAAAAAUUAGCGGAUGACUUGUGGCUGGGGGUGAAAGGCCAAUCAAACCGGG
AGAUAGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGUGAAUUCAUCUCCGGGGGUAGAGCACUGUUUCGGCAAG
GGGGUCAUCCCGACUUACCAACCCGAUGCAAACUGCGAAUACCGGAGAAUGUUAUCACGGGAGACACACGGCGGGUGCUA
ACGUCCGUCGUGAAGAGGGAAACAACCCAGACCGCCAGCUAAGGUCCCAAAGUCAUGGUUAAGUGGGAAACGAUGUGGGA
AGGCCCAGACAGCCAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCACUGGUCGAGUCGGCCU
GCGCGGAAGAUGUAACGGGGCUAAACCAUGCACCGAAGCUGCGGCAGCGACACUAUGUGUUGUUGGGUAGGGGAGCGUUC
UGUAAGCCUGUGAAGGUGUGCUGUGAGGCAUGCUGGAGGUAUCAGAAGUGCGAAUGCUGACAUAAGUAACGAUAAAGCGG
GUGAAAAGCCCGCUCGCCGGAAGACCAAGGGUUCCUGUCCAACGUUAAUCGGGGCAGGGUGAGUCGACCCCUAAGGCGAG
GCCGAAAGGCGUAGUCGAUGGGAAACAGGUUAAUAUUCCUGUACUUGGUGUUACUGCGAAGGGGGGACGGAGAAGGCUAU
GUUGGCCGGGCGACGGUUGUCCCGGUUUAAGCGUGUAGGCUGGUUUUCCAGGCAAAUCCGGAAAAUCAAGGCUGAGGCGU
GAUGACGAGGCACUACGGUGCUGAAGCAACAAAUGCCCUGCUUCCAGGAAAAGCCUCUAAGCAUCAGGUAACAUCAAAUC
GUACCCCAAACCGACACAGGUGGUCAGGUAGAGAAUACCAAGGCGCUUGAGAGAACUCGGGUGAAGGAACUAGGCAAAAU
GGUGCCGUAACUUCGGGAGAAGGCACGCUGAUAUGUAGGUGAAGCGACUUGCUCGUGGAGCUGAAAUCAGUCGAAGAUAC
CAGCUGGCUGCAACUGUUUAUUAAAAACACAGCACUGUGCAAACACGAAAGUGGACGUAUACGGUGUGACGCCUGCCCGG
UGCCGGAAGGUUAAUUGAUGGGGUUAGCCGCAAGGCGAAGCUCUUGAUCGAAGCCCCGGUAAACGGCGGCCGUAACUAUA
ACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAUGGCGUAAUGAUGGCCAGGCUGUCUCCA
CCCGAGACUCAGUGAAAUUGAACUCGCUGUGAAGAUGCAGUGUACCCGCGGCAAGACGGAAAGACCCCGUGAACCUUUAC
UAUAGCUUGACACUGAACAUUGAGCCUUGAUGUGUAGGAUAGGUGGGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGA
GCCGACCUUGAAAUACCACCCUUUAAUGUUUGAUGUUCUAACGUUGACCCGUAAUCCGGGUUGCGGACAGUGUCUGGUGG
GUAGUUUGACUGGGGCGGUCUCCUCCUAAAGAGUAACGGAGGAGCACGAAGGUUGGCUAAUCCUGGUCGGACAUCAGGAG
GUUAGUGCAAUGGCAUAAGCCAGCUUGACUGCGAGCGUGACGGCGCGAGCAGGUGCGAAAGCAGGUCAUAGUGAUCCGGU
GGUUCUGAAUGGAAGGGCCAUCGCUCAACGGAUAAAAGGUACUCCGGGGAUAACAGGCUGAUACCGCCCAAGAGUUCAUA
UCGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCACAUCCUGGGGCUGAAGUAGGUCCCAAGGGUAUGGCUGUUCGC
CAUUUAAAGUGGUACGCGAGCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCCGUGGGCGCUGGAGAACUG
AGGGGGGCUGCUCCUAGUACGAGAGGACCGGAGUGGACGCAUCACUGGUGUUCGGGUUGUCAUGCCAAUGGCACUGCCCG
GUAGCUAAAUGCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCACGAAACUUGCCCCGAGAUGAGUUCUCCCUGACUCCUU
GAGAGUCCUGAAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGCGCAGCGAUGCGUUGAGCUAACCGGU
ACUAAUGA
>URS00009992A0_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial small subunit ribosomal RNA
AAAUUGAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAGA
AGACUUGCUUCUUUGCUGACGAGUGGCGGAC
>URS000034CDF1_316385 Escherichia coli str. K-12 substr. DH10B Bacterial antisense RNA HPnc0260
UGUAACAAAGUUGCCAUAGCGAUUCUCCUUCUGAUAACGCAUACGAAGACAGUGUAAAUCUUUUAACGUAUUGGAUACAG
AGAAGAAACAGAGGGAAAAAGGAGAAGACCAGAUUAAGAAAAUCUGGUGCGUCCGAGUGGACUCGAACCACCGACCCCCA
CCA
>URS000095970D_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial small subunit ribosomal RNA
CAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGGGGAUGACGUCAAGUCAUCAUGGCCCUUACGACCAGGGCUACAC
ACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGACCUCAUAAAGUGCGUCGUAGUCCGGAUU
GGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCAGAAUGCCACGGUGAAUACGUUCCCGGGC
CUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGUAGCUUAACCUUCGGGAGGGCGCUUACCA
CUUUGUGAUUCAUGACUGGGGUGAAGUCGUAACAAGGUAACCGUAGGGGAACCUGCGGUUGGAUCACCUCCUUA
>URS000095AC52_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial large subunit ribosomal RNA
GCUGUUCGCCAUUUAAAGUGGUACGCGAGCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCCGUGGGCGCU
GGAGAACUGAGGGGGGCUGCUCCUAGUACGAGAGGACCGGAGUGGACGCAUCACUGGUGUUCGGGUUGUCAUGCCAAUGG
CACUGCCCGGUAGCUAAAUGCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCACGAAACUUGCCCCGAGAUGAGUUCUCCC
UGACUCCUUGAGAGUCCUGAAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGCGCAGCGAUGCGUUGAG
CUAACCGGUACUAAUGAACCGUGAGGCUUAACCUU
>URS0000AB7A1D_316407 Escherichia coli str. K-12 substr. W3110 Archaeal large subunit ribosomal RNA
AGGUUAAGCGACUAAGCGUACACGGUGGAUGCCCUGGCAGUCAGAGGCGAUGAAGGACGUGCUAAUCUGCGAUAAGCGUC
GGUAAGGUGAUAUGAACCGUUAUAACCGGCGAUUUCCGAAUGGGGAAACCCAGUGUGUUUCGACACACUAUCAUUAACUG
AAUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCC
CAGUAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCUGAAUCAGUGUGUGUGUUAGUGGAAGCGUCUGGAAAGGCGCGCG
AUACAGGGUGACAGCCCCGUACACAAAAAUGCACAUGCUGUGAGCUCGAUGAGUAGGGCGGGACACGUGGUAUCCUGUCU
GAAUAUGGGGGGACCAUCCUCCAAGGCUAAAUACUCCUGACUGACCGAUAGUGAACCAGUACCGUGAGGGAAAGGCGAAA
AGAACCCCGGCGAGGGGAGUGAAAAAGAACCUGAAACCGUGUACGUACAAGCAGUGGGAGCAUGCUUAGGCGUGUGACUG
CGUACCUUUUGUAUAAUGGGUCAGCGACUUAUAUUCUGUAGCAAGGUUAACCGAAUAGGGGAGCCGAAGGGAAACCGAGU
CUUAACUGGGCGUUAAGUUGCAGGGUAUAGACCCGAAACCCGGUGAUCUAGCCAUGGGCAGGUUGAAGGUUGGGUAACAC
UAACUGGAGGACCGAACCGACUAAUGUUGAAAAAUUAGCGGAUGACUUGUGGCUGGGGGUGAAAGGCCAAUCAAACCGGG
AGAUAGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGUGAACUCAUCUCCGGGGGUAGAGCACUGUUUCGGCAAG
GGGGUCAUCCCGACUUACCAACCCGAUGCAAACUGCGAAUACCGGAGAAUGUUAUCACGGGAGACACACGGCGGGUGCUA
ACGUCCGUCGUGAAGAGGGAAACAACCCAGACCGCCAGCUAAGGUCCCAAAGUCAUGGUUAAGUGGGAAACGAUGUGGGA
AGGCCCAGACAGCCAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCACUGGUCGAGUCGGCCU
GCGCGGAAGAUGUAACGGGGCUAAACCAUGCACCGAAGCUGCGGCAGCGACGCUUAUGCGUUGUUGGGUAGGGGAGCGUU
CUGUAAGCCUGUGAAGGUGUACUGUGAGGUAUGCUGGAGGUAUCAGAAGUGCGAAUGCUGACAUAAGUAACGAUAAAGCG
GGUGAAAAGCCCGCUCGCCGGAAGACCAAGGGUUCCUGUCCAACGUUAAUCGGGGCAGGGUGAGUCGACCCCUAAGGCGA
GGCCGAAAGGCGUAGUCGAUGGGAAACAGGUUAAUAUUCCUGUACUUGGUGUUACUGCGAAGGGGGGACGGAGAAGGCUA
UGUUGGCCGGGCGACGGUUGUCCCGGUUUAAGCGUGUAGGCUGGUUUUCCAGGCAAAUCCGGAAAAUCAAGGCUGAGGCG
UGAUGACGAGGCACUACGGUGCUGAAGCAACAAAUGCCCUGCUUCCAGGAAAAGCCUCUAAGCAUCAGGUAACAUCAAAU
CGUACCCCAAACCGACACAGGUGGUCAGGUAGAGAAUACCAAGGCGCUUGAGAGAACUCGGGUGAAGGAACUAGGCAAAA
UGGUGCCGUAACUUCGGGAGAAGGCACGCUGAUAUGUAGGUGAAGCGACUUGCUCGUGGAGCUGAAAUCAGUCGAAGAUA
CCAGCUGGCUGCAACUGUUUAUUAAAAACACAGCACUGUGCAAACACGAAAGUGGACGUAUACGGUGUGACGCCUGCCCG
GUGCCGGAAGGUUAAUUGAUGGGGUUAGCGCAAGCGAAGCUCUUGAUCGAAGCCCCGGUAAACGGCGGCCGUAACUAUAA
CGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAUGGCGUAAUGAUGGCCAGGCUGUCUCCAC
CCGAGACUCAGUGAAAUUGAACUCGCUGUGAAGAUGCAGUGUACCCGCGGCAAGACGGAAAGACCCCGUGAACCUUUACU
AUAGCUUGACACUGAACAUUGAGCCUUGAUGUGUAGGAUAGGUGGGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGAG
CCGACCUUGAAAUACCACCCUUUAAUGUUUGAUGUUCUAACGUUGACCCGUAAUCCGGGUUGCGGACAGUGUCUGGUGGG
UAGUUUGACUGGGGCGGUCUCCUCCUAAAGAGUAACGGAGGAGCACGAAGGUUGGCUAAUCCUGGUCGGACAUCAGGAGG
UUAGUGCAAUGGCAUAAGCCAGCUUGACUGCGAGCGUGACGGCGCGAGCAGGUGCGAAAGCAGGUCAUAGUGAUCCGGUG
GUUCUGAAUGGAAGGGCCAUCGCUCAACGGAUAAAAGGUACUCCGGGGAUAACAGGCUGAUACCGCCCAAGAGUUCAUAU
CGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCACAUCCUGGGGCUGAAGUAGGUCCCAAGGGUAUGGCUGUUCGCC
AUUUAAAGUGGUACGCGAGCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCCGUGGGCGCUGGAGAACUGA
GGGGGGCUGCUCCUAGUACGAGAGGACCGGAGUGGACGCAUCACUGGUGUUCGGGUUGUCAUGCCAAUGGCACUGCCCGG
UAGCUAAAUGCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCACGAAACUUGCCCCGAGAUGAGUUCUCCCUGACUCCUUG
AGAGUCCUGAAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGCGCAGCGAUGCGUUGAGCUAACCGGUA
CUAAUGAACCGUGAGGCUUAACCU
>URS00000FC91C_316385 Escherichia coli str. K-12 substr. DH10B DicF RNA
UUCUGGUGACGUUUGGCGGUAUCAGUUUUACUCCGUGACUGCUCUGCCGCCC
>URS000012CA7F_879462 Escherichia coli str. K-12 substr. MG1655star RyhB RNA
GAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUUUUUU
>URS0000ABD319_316407 Escherichia coli str. K-12 substr. W3110 Eukaryotic large subunit ribosomal RNA
AAUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCC
CAGUAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCUGAAUCAGUAUGUGUGUUAGUGGAAGCGUCUGGAAAGGCGCGCG
AUACAGGGUGACAGCCCCGUACACAAAAAUGCACAUAUUGUGAGCUCGAUGAGUAGGGCGGGACACGUGGUAUCCUGUCU
GAAUAUGGGGGGACCAUCCUCCAAGGCUAAAUACUCCUGACUGACCGAUAGUGAACCAGUACCGUGAGGGAAAGGCGAAA
AGAACCCCGGCGAGGGGAGUGAAAAAGAACCUGAAACCGUGUACGUACAAGCAGUGGGAGCACGCUUAGGCGUGUGACUG
CGUACCUUUUGUAUAAUGGGUCAGCGACUUAUAUUCUGUAGCAAGGUUAACCGAAUAGGGGAGCCGAAGGGAAACCGAGU
CUUAACUGGGCGUUAAGUUGCAGGGUAUAGACCCGAAACCCGGUGAUCUAGCCAUGGGCAGGUUGAAGGUUGGGUAACAC
UAACUGGAGGACCGAACCGACUAAUGUUGAAAAAUUAGCGGAUGACUUGUGGCUGGGGGUGAAAGGCCAAUCAAACCGGG
AGAUAGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGUGAAUUCAUCUCCGGGGGUAGAGCACUGUUUCGGCAAG
GGGGUCAUCCCGACUUACCAACCCGAUGCAAACUGCGAAUACCGGAGAAUGUUAUCACGGGAGACACACGGCGGGUGCUA
ACGUCCGUCGUGAAGAGGGAAACAACCCAGACCGCCAGCUAAGGUCCCAAAGUCAUGGUUAAGUGGGAAACGAUGUGGGA
AGGCCCAGACAGCCAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCACUGGUCGAGUCGGCCU
GCGCGGAAGAUGUAACGGGGCUAAACCAUGCACCGAAGCUGCGGCAGCGACGCUUAUGCGUUGUUGGGUAGGGGAGCGUU
CUGUAAGCCUGCGAAGGUGUGCUGUGAGGCAUGCUGGAGGUAUCAGAAGUGCGAAUGCUGACAUAAGUAACGAUAAAGCG
GGUGAAAAGCCCGCUCGCCGGAAGACCAAGGGUUCCUGUCCAACGUUAAUCGGGGCAGGGUGAGUCGACCCCUAAGGCGA
GGCCGAAAGGCGUAGUCGAUGGGAAACAGGUUAAUAUUCCUGUACUUGGUGUUACUGCGAAGGGGGGACGGAGAAGGCUA
UGUUGGCCGGGCGACGGUUGUCCCGGUUUAAGCGUGUAGGCUGGUUUUCCAGGCAAAUCCGGAAAAUCAAGGCUGAGGCG
UGAUGACGAGGCACUACGGUGCUGAAGCAACAAAUGCCCUGCUUCCAGGAAAAGCCUCUAAGCAUCAGGUAACAUCAAAU
CGUACCCCAAACCGACACAGGUGGUCAGGUAGAGAAUACCAAGGCGCUUGAGAGAACUCGGGUGAAGGAACUAGGCAAAA
UGGUGCCGUAACUUCGGGAGAAGGCACGCUGAUAUGUAGGUGAAGCGACUUGCUCGUGGAGCUGAAAUCAGUCGAAGAUA
CCAGCUGGCUGCAACUGUUUAUUAAAAACACAGCACUGUGCAAACACGAAAGUGGACGUAUACGGUGUGACGCCUGCCCG
GUGCCGGAAGGUUAAUUGAUGGGGUCAGCGCAAGCGAAGCUCUUGAUCGAAGCCCCGGUAAACGGCGGCCGUAACUAUAA
CGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAUGGCGUAAUGAUGGCCAGGCUGUCUCCAC
CCGAGACUCAGUGAAAUUGAACUCGCUGUGAAGAUGCAGUGUACCCGCGGCAAGACGGAAAGACCCCGUGAACCUUUACU
AUAGCUUGACACUGAACAUUGAGCCUUGAUGUGUAGGAUAGGUGGGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGAG
CCGACCUUGAAAUACCACCCUUUAAUGUUUGAUGUUCUAACGUGGACCCGUGAUCCGGGUUGCGGACAGUGUCUGGUGGG
UAGUUUGACUGGGGCGGUCUCCUCCUAAAGAGUAACGGAGGAGCACGAAGGUUGGCUAAUCCUGGUCGGACAUCAGGAGG
UUAGUGCAAUGGCAUAAGCCAGCUUGACUGCGAGCGUGACGGCGCGAGCAGGUGCGAAAGCAGGUCAUAGUGAUCCGGUG
GUUCUGAAUGGAAGGGCCAUCGCUCAACGGAUAAAAGGUACUCCGGGGAUAACAGGCUGAUACCGCCCAAGAGUUCAUAU
CGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCACAUCCUGGAGCUGAAGUAGGUCCCAAGGGUAUGGCUGUUCGCC
AUUUAAAGUGGUACGCGAGCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCCGUGGGCGCUGGAGAACUGA
GGGGGGCUGCUCCUAGUACGAGAGGACCGGAGUGGACGCAUCACUGGUGUUCGGGUUGUCAUGCCAAUGGCACUGCCCGG
UAGCUAAAUGCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCACGAAACUUGCCCCGAGAUGAGUUCUCCCUGACUCCUUG
AGAGUCCUGAAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGCGCAGCGAUGCGUUGAGCUAACCGGUA
CUAAUGA
>URS00009A77FC_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial large subunit ribosomal RNA
GCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCACGAAACUUGCCCCGAGAUGAGUUCUCCCUGACCCUUUAAGGGUCCUG
AAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGCGCAGCGAUGCGUUGAGCUAACCGGUACUAAUGAAC
CGUGAGGCUUAACCUU
>URS0000AB3580_316385 Escherichia coli str. K-12 substr. DH10B Archaeal large subunit ribosomal RNA
AGGUUAAGCGACUAAGCGUACACGGUGGAUGCCCUGGCAGUCAGAGGCGAUGAAGGACGUGCUAAUCUGCGAUAAGCGUC
GGUAAGGUGAUAUGAACCGUUAUAACCGGCGAUUUCCGAAUGGGGAAACCCAGUGUGUUUCGACACACUAUCAUUAACUG
AAUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCC
CAGUAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCUGAAUCAGUGUGUGUGUUAGUGGAAGCGUCUGGAAAGGCGCGCG
AUACAGGGUGACAGCCCCGUACACAAAAAUGCACAUGCUGUGAGCUCGAUGAGUAGGGCGGGACACGUGGUAUCCUGUCU
GAAUAUGGGGGGACCAUCCUCCAAGGCUAAAUACUCCUGACUGACCGAUAGUGAACCAGUACCGUGAGGGAAAGGCGAAA
AGAACCCCGGCGAGGGGAGUGAAAAAGAACCUGAAACCGUGUACGUACAAGCAGUGGGAGCACGCUUAGGCGUGUGACUG
CGUACCUUUUGUAUAAUGGGUCAGCGACUUAUAUUCUGUAGCAAGGUUAACCGAAUAGGGGAGCCGAAGGGAAACCGAGU
CUUAACUGGGCGUUAAGUUGCAGGGUAUAGACCCGAAACCCGGUGAUCUAGCCAUGGGCAGGUUGAAGGUUGGGUAACAC
UAACUGGAGGACCGAACCGACUAAUGUUGAAAAAUUAGCGGAUGACUUGUGGCUGGGGGUGAAAGGCCAAUCAAACCGGG
AGAUAGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGUGAAUUCAUCUCCGGGGGUAGAGCACUGUUUCGGCAAG
GGGGUCAUCCCGACUUACCAACCCGAUGCAAACUGCGAAUACCGGAGAAUGUUAUCACGGGAGACACACGGCGGGUGCUA
ACGUCCGUCGUGAAGAGGGAAACAACCCAGACCGCCAGCUAAGGUCCCAAAGUCAUGGUUAAGUGGGAAACGAUGUGGGA
AGGCCCAGACAGCCAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCACUGGUCGAGUCGGCCU
GCGCGGAAGAUGUAACGGGGCUAAACCAUGCACCGAAGCUGCGGCAGCGACGCUUAUGCGUUGUUGGGUAGGGGAGCGUU
CUGUAAGCCUGCGAAGGUGUGCUGUGAGGCAUGCUGGAGGUAUCAGAAGUGCGAAUGCUGACAUAAGUAACGAUAAAGCG
GGUGAAAAGCCCGCUCGCCGGAAGACCAAGGGUUCCUGUCCAACGUUAAUCGGGGCAGGGUGAGUCGACCCCUAAGGCGA
GGCCGAAAGGCGUAGUCGAUGGGAAACAGGUUAAUAUUCCUGUACUUGGUGUUACUGCGAAGGGGGGACGGAGAAGGCUA
UGUUGGCCGGGCGACGGUUGUCCCGGUUUAAGCGUGUAGGCUGGUUUUCCAGGCAAAUCCGGAAAAUCAAGGCUGAGGCG
UGAUGACGAGGCACUACGGUGCUGAAGCAACAAAUGCCCUGCUUCCAGGAAAAGCCUCUAAGCAUCAGGUAACAUCAAAU
CGUACCCCAAACCGACACAGGUGGUCAGGUAGAGAAUACCAAGGCGCUUGAGAGAACUCGGGUGAAGGAACUAGGCAAAA
UGGUGCCGUAACUUCGGGAGAAGGCACGCUGAUAUGUAGGUGAGGUCCCUCGCGGAUGGAGCUGAAAUCAGUCGAAGAUA
CCAGCUGGCUGCAACUGUUUAUUAAAAACACAGCACUGUGCAAACACGAAAGUGGACGUAUACGGUGUGACGCCUGCCCG
GUGCCGGAAGGUUAAUUGAUGGGGUUAGCGCAAGCGAAGCUCUUGAUCGAAGCCCCGGUAAACGGCGGCCGUAACUAUAA
CGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAUGGCGUAAUGAUGGCCAGGCUGUCUCCAC
CCGAGACUCAGUGAAAUUGAACUCGCUGUGAAGAUGCAGUGUACCCGCGGCAAGACGGAAAGACCCCGUGAACCUUUACU
AUAGCUUGACACUGAACAUUGAGCCUUGAUGUGUAGGAUAGGUGGGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGAG
CCGACCUUGAAAUACCACCCUUUAAUGUUUGAUGUUCUAACGUUGACCCGUAAUCCGGGUUGCGGACAGUGUCUGGUGGG
UAGUUUGACUGGGGCGGUCUCCUCCUAAAGAGUAACGGAGGAGCACGAAGGUUGGCUAAUCCUGGUCGGACAUCAGGAGG
UUAGUGCAAUGGCAUAAGCCAGCUUGACUGCGAGCGUGACGGCGCGAGCAGGUGCGAAAGCAGGUCAUAGUGAUCCGGUG
GUUCUGAAUGGAAGGGCCAUCGCUCAACGGAUAAAAGGUACUCCGGGGAUAACAGGCUGAUACCGCCCAAGAGUUCAUAU
CGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCACAUCCUGGGGCUGAAGUAGGUCCCAAGGGUAUGGCUGUUCGCC
AUUUAAAGUGGUACGCGAGCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCCGUGGGCGCUGGAGAACUGA
GGGGGGCUGCUCCUAGUACGAGAGGACCGGAGUGGACGCAUCACUGGUGUUCGGGUUGUCAUGCCAAUGGCACUGCCCGG
UAGCUAAAUGCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCACGAAACUUGCCCCGAGAUGAGUUCUCCCUGACCCUUUA
AGGGUCCUGAAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGCGCAGCGAUGCGUUGAGCUAACCGGUA
CUAAUGAACCGUGAGGCUUAACCU
>URS00009954B4_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial small subunit ribosomal RNA
AAAUUGAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAAC
AGCUUGCUGUUUCGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCUGAUGGAGGGGGAUAACUACUGGA
AACGGUAGCUAAUACCGCAUAACGUCGCAAGACCAAAGAGGGGGACCCUCGGGCCUCUUGCCAUCGGAUGUGCCCAGAUG
GGAUUAGCUUGUUGGUGGGGUAACGGCUCACCAAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGA
ACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGC
CGCGUGUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUU
GACGUUACCCGCAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAA
UUACUGGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCGGGCUC
>URS00001C31F3_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GCCGAGGUGGUGGAAUUGGUAGACACGCUACCUUGAGGUGGUAGUGCCCAAUAGGGCUUACGGGUUCAAGUCCCGUCCUC
GGUA
>URS00009A7FFE_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial small subunit ribosomal RNA
ACUUUGUGAUUCAUGACUGGGGUGAAGUCGUAACAAGGUAACCGUAGGGGAACCUGCGGUUGGAUCACCUCCUUA
>URS00000FC91C_879462 Escherichia coli str. K-12 substr. MG1655star DicF RNA
UUCUGGUGACGUUUGGCGGUAUCAGUUUUACUCCGUGACUGCUCUGCCGCCC
>URS000015F9F0_316407 Escherichia coli str. K-12 substr. W3110 tRNA
AGGCUUGUAGCUCAGGUGGUUAGAGCGCACCCCUGAUAAGGGUGAGGUCGGUGGUUCAAGUCCACUCAGGCCUA
>URS0000ABCB96_316407 Escherichia coli str. K-12 substr. W3110 Archaeal large subunit ribosomal RNA
AGGUUAAGCGACUAAGCGUACACGGUGGAUGCCCUGGCAGUCAGAGGCGAUGAAGGACGUGCUAAUCUGCGAUAAGCGUC
GGUAAGGUGAUAUGAACCGUUAUAACCGGCGAUUUCCGAAUGGGGAAACCCAGUGUGUUUCGACACACUAUCAUUAACUG
AAUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCC
CAGUAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCUGAAUCAGUGUGUGUGUUAGUGGAAGCGUCUGGAAAGGCGCGCG
AUACAGGGUGACAGCCCCGUACACAAAAAUGCACAUGCUGUGAGCUCGAUGAGUAGGGCGGGACACGUGGUAUCCUGUCU
GAAUAUGGGGGGACCAUCCUCCAAGGCUAAAUACUCCUGACUGACCGAUAGUGAACCAGUACCGUGAGGGAAAGGCGAAA
AGAACCCCGGCGAGGGGAGUGAAAAAGAACCUGAAACCGUGUACGUACAAGCAGUGGGAGCACGCUUAGGCGUGUGACUG
CGUACCUUUUGUAUAAUGGGUCAGCGACUUAUAUUCUGUAGCAAGGUUAACCGAAUAGGGGAGCCGAAGGGAAACCGAGU
CUUAACUGGGCGUUAAGUUGCAGGGUAUAGACCCGAAACCCGGUGAUCUAGCCAUGGGCAGGUUGAAGGUUGGGUAACAC
UAACUGGAGGACCGAACCGACUAAUGUUGAAAAAUUAGCGGAUGACUUGUGGCUGGGGGUGAAAGGCCAAUCAAACCGGG
AGAUAGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGUGAAUUCAUCUCCGGGGGUAGAGCACUGUUUCGGCAAG
GGGGUCAUCCCGACUUACCAACCCGAUGCAAACUGCGAAUACCGGAGAAUGUUAUCACGGGAGACACACGGCGGGUGCUA
ACGUCCGUCGUGAAGAGGGAAACAACCCAGACCGCCAGCUAAGGUCCCAAAGUCAUGGUUAAGUGGGAAACGAUGUGGGA
AGGCCCAGACAGCCAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCACUGGUCGAGUCGGCCU
GCGCGGAAGAUGUAACGGGGCUAAACCAUGCACCGAAGCUGCGGCAGCGACGCUUAUGCGUUGUUGGGUAGGGGAGCGUU
CUGUAAGCCUGCGAAGGUGUGCUGUGAGGCAUGCUGGAGGUAUCAGAAGUGCGAAUGCUGACAUAAGUAACGAUAAAGCG
GGUGAAAAGCCCGCUCGCCGGAAGACCAAGGGUUCCUGUCCAACGUUAAUCGGGGCAGGGUGAGUCGACCCCUAAGGCGA
GGCCGAAAGGCGUAGUCGAUGGGAAACAGGUUAAUAUUCCUGUACUUGGUGUUACUGCGAAGGGGGGACGGAGAAGGCUA
UGUUGGCCGGGCGACGGUUGUCCCGGUUUAAGCGUGUAGGCUGGUUUUCCAGGCAAAUCCGGAAAAUCAAGGCUGAGGCG
UGAUGACGAGGCACUACGGUGCUGAAGCAACAAAUGCCCUGCUUCCAGGAAAAGCCUCUAAGCAUCAGGUAACAUCAAAU
CGUACCCCAAACCGACACAGGUGGUCAGGUAGAGAAUACCAAGGCGCUUGAGAGAACUCGGGUGAAGGAACUAGGCAAAA
UGGUGCCGUAACUUCGGGAGAAGGCACGCUGAUAUGUAGGUGAGGUCCCUCGCGGAUGGAGCUGAAAUCAGUCGAAGAUA
CCAGCUGGCUGCAACUGUUUAUUAAAAACACAGCACUGUGCAAACACGAAAGUGGACGUAUACGGUGUGACGCCUGCCCG
GUGCCGGAAGGUUAAUUGAUGGGGUUAGCGCAAGCGAAGCUCUUGAUCGAAGCCCCGGUAAACGGCGGCCGUAACUAUAA
CGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAUGGCGUAAUGAUGGCCAGGCUGUCUCCAC
CCGAGACUCAGUGAAAUUGAACUCGCUGUGAAGAUGCAGUGUACCCGCGGCAAGACGGAAAGACCCCGUGAACCUUUACU
AUAGCUUGACACUGAACAUUGAGCCUUGAUGUGUAGGAUAGGUGGGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGAG
CCGACCUUGAAAUACCACCCUUUAAUGUUUGAUGUUCUAACGUUGACCCGUAAUCCGGGUUGCGGACAGUGUCUGGUGGG
UAGUUUGACUGGGGCGAUCUCCUCCUAAAGAGUAACGGAGGAGCACGAAGGUUGGCUAAUCCUGGUCGGACAUCAGGAGG
UUAGUGCAAUGGCAUAAGCCAGCUUGACUGCGAGCGUGACGGCGCGAGCAGGUGCGAAAGCAGGUCAUAGUGAUCCGGUG
GUUCUGAAUGGAAGGGCCAUCGCUCAACGGAUAAAAGGUACUCCGGGGAUAACAGGCUGAUACCGCCCAAGAGUUCAUAU
CGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCACAUCCUGGGGCUGAAGUAGGUCCCAAGGGUAUGGCUGUUCGCC
AUUUAAAGUGGUACGCGAGCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCCGUGGGCGCUGGAGAACUGA
GGGGGGCUGCUCCUAGUACGAGAGGACCGGAGUGGACGCAUCACUGGUGUUCGGGUUGUCAUGCCAAUGGCACUGCCCGG
UAGCUAAAUGCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCACGAAACUUGCCCCGAGAUGAGUUCUCCCUGACUCCUUG
AGAGUCCUGAAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGCGCAGCGAUGCGUUGAGCUAACCGGUA
CUAAUGAACCGUGAGGCUUAACCU
>URS000098F8AE_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial large subunit ribosomal RNA
CUCCGGUAUAACGGCUGAUACCGCCCAAGAGUUCAUAUCGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCACAUCC
UGGGGCUGAAGUAGGUCCCAAGGGUAUGGCUGUUCGCCAUUUAAAGUGGUACGCGAGCUGGGUUUAGAACGUCGUGAGAC
AGUUCGGUCCCUAUCUGCCGUGGGCGCUGGAGAACUGAGGGGGGCUGCUCCUAGUACGAGAGGACCGGAGUGGACGCAUC
ACUGGUGUUCGGGUUGUCAUGCCAAUGGCACUGCCCGGUAGCUAAAUGCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCA
CGAAACUUGCCCCGAGAUGAGUUCUCCCUGACCCUUUAAGGGUCCUGAAGGAACGUUGAAGACGACGACGUUGAUAGGCC
GGGUGUGUAAGCGCAGCGAUGCGUUGAGCUAACCGGUACUAAUGAACCGUGAGGCUUAACCUU
>URS0000AB70E0_316407 Escherichia coli str. K-12 substr. W3110 Eukaryotic large subunit ribosomal RNA
AAUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCC
CAGUAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCUGAAUCAGUGUGUGUGUUAGUGGAAGCGUCUGGAAAGGCGCGCG
AUACAGGGUGACAGCCCCGUACACAAAAAUGCACAUGCUGUGAGCUCGAUGAGUAGGGCGGGACACGUGGUAUCCUGUCU
GAAUAUGGGGGGACCAUCCUCCAAGGCUAAAUACUCCUGACUGACCGAUAGUGAACCAGUACCGUGAGGGAAAGGCGAAA
AGAACCCCGGCGAGGGGAGUGAAAAAGAACCUGAAACCGUGUACGUACAAGCAGUGGGAGCACGCUUAGGCGUGUGACUG
CGUACCUUUUGUAUAAUGGGUCAGCGACUUAUAUUCUGUAGCAAGGUUAACCGAAUAGGGGAGCCGAAGGGAAACCGAGU
CUUAACUGGGCGUUAAGUUGCAGGGUAUAGACCCGAAACCCGGUGAUCUAGCCAUGGGCAGGUUGAAGGUUGGGUAACAC
UAACUGGAGGACCGAACCGACUAAUGUUGAAAAAUUAGCGGAUGACUUGUGGCUGGGGGUGAAAGGCCAAUCAAACCGGG
AGAUAGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGUGAAUUCAUCUCCGGGGGUAGAGCACUGUUUCGGCAAG
GGGGUCAUCCCGACUUACCAACCCGAUGCAAACUGCGAAUACCGGAGAAUGUUAUCACGGGAGACACACGGCGGGUGCUA
ACGUCCGUCGUGAAGAGGGAAACAACCCAGACCGCCAGCUAAGGUCCCAAAGUCAUGGUUAAGUGGGAAACGAUGUGGGA
AGGCCCAGACAGCCAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCACUGGUCGAGUCGGCCU
GCGCGGAAGAUGUAACGGGGCUAAACCAUGCACCGAAGCUGCGGCAGCGACGCUUAUGCGUUGUUGGGUAGGGGAGCGUU
CUGUAAGCCUGCGAAGGUGUGCUGUGAGGCAUGCUGGAGGUAUCAGAAGUGCGAAUGCUGACAUAAGUAACGAUAAAGCG
GGUGAAAAGCCCGCUCGCCGGAAGACCAAGGGUUCCUGUCCAACGUUAAUCGGGGCAGGGUGAGUCGACCCCUAAGGCGA
GGCCGAAAGGCGUAGUCGAUGGGAAACAGGUUAAUAUUCCUGUACUUGGUGUUACUGCGAAGGGGGGACGGAGAAGGCUA
UGUUGGCCGGGCGACGGUUGUCCCGGUUUAAGCGUGUAGGCUGGUUUUCCAGGCAAAUCCGGAAAAUCAAGGCUGAGGCG
UGAUGACGAGGCACUACGGUGCUGAAGCAACAAAUGCCCUGCUUCCAGGAAAAGCCUCUAAGCAUCAGGUAACAUCAAAU
CGUACCCCAAACCGACACAGGUGGUCAGGUAGAGAAUACCAAGGCGCUUGAGAGAACUCGGGUGAAGGAACUAGGCAAAA
UGGUGCCGUAACUUCGGGAGAAGGCACGCUGAUAUGUAGGUGAGGUCCCUCGCGGAUGGAGCUGAAAUCAGUCGAAGAUA
CCAGCUGGCUGCAACUGUUUAUUAAAAACACAGCACUGUGCAAACACGAAAGUGGACGUAUACGGUGUGACGCCUGCCCG
GUGCCGGAAGGUUAAUUGAUGGGGUUAGCGCAAGCGAAGCUCUUGAUCGAAGCCCCGGUAAACGGCGGCCGUAACUAUAA
CGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAUGGCGUAAUGAUGGCCAGGCUGUCUCCAC
CCGAGACUCAGUGAAAUUGAACUCGCUGUGAAGAUGCAGUGUACCCGCGGCAAGACGGAAAGACCCCGUGAACCUUUACU
AUAGCUUGACACUGAACAUUGAGCCUUGAUGUGUAGGAUAGGUGGGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGAG
CCGACCUUGAAAUACCACCCUUUAAUGUUUGAUGUUCUAACGUUGACCCGUAAUCCGGGUUGCGGACAGUGUCUGGUGGG
UAGUUUGACUGGGGCGGUCUCCUCCUAAAGAGUAACGGAGGAGCACGAAGGUUGGCUAAUCCUGGUCGGACAUCAGGAGG
UUAGUGCAAUGGCAUAAGCCAGCUUGACUGCGAGCGUGACGGCGCGAGCAGGUGCGAAAGCAGGUCAUAGUGAUCCGGUG
GUUCUGAAUGGAAGGGCCAUCGCUCAACGGAUAAAAGGUACUCCGGGGAUAACAGGCUGAUACCGCCCAAGAGUUCAUAU
CGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCACAUCCUGGGGCUGAAGUAGGUCCCAAGGGUAUGGCUGUUCGCC
AUUUAAAGUGGUACGCGAGCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCCGUGGGCGCUGGAGAACUGA
GGGGGGCUGCUCCUAGUACGAGAGGACCGGAGUGGACGCAUCACUGGUGUUCGGGUUGUCAUGCCAAUGGCACUGCCCGG
UAGCUAAAUGCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCACGAAACUUGCCCCGAGAUGAGUUCUCCCUGACCCUUUA
AGGGUCCUGAAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGCGCAGCGAUGCGUUGAGCUAACCGGUA
CUAAUGAACCGUGA
>URS0000AB70E0_316385 Escherichia coli str. K-12 substr. DH10B Eukaryotic large subunit ribosomal RNA
AAUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCC
CAGUAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCUGAAUCAGUGUGUGUGUUAGUGGAAGCGUCUGGAAAGGCGCGCG
AUACAGGGUGACAGCCCCGUACACAAAAAUGCACAUGCUGUGAGCUCGAUGAGUAGGGCGGGACACGUGGUAUCCUGUCU
GAAUAUGGGGGGACCAUCCUCCAAGGCUAAAUACUCCUGACUGACCGAUAGUGAACCAGUACCGUGAGGGAAAGGCGAAA
AGAACCCCGGCGAGGGGAGUGAAAAAGAACCUGAAACCGUGUACGUACAAGCAGUGGGAGCACGCUUAGGCGUGUGACUG
CGUACCUUUUGUAUAAUGGGUCAGCGACUUAUAUUCUGUAGCAAGGUUAACCGAAUAGGGGAGCCGAAGGGAAACCGAGU
CUUAACUGGGCGUUAAGUUGCAGGGUAUAGACCCGAAACCCGGUGAUCUAGCCAUGGGCAGGUUGAAGGUUGGGUAACAC
UAACUGGAGGACCGAACCGACUAAUGUUGAAAAAUUAGCGGAUGACUUGUGGCUGGGGGUGAAAGGCCAAUCAAACCGGG
AGAUAGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGUGAAUUCAUCUCCGGGGGUAGAGCACUGUUUCGGCAAG
GGGGUCAUCCCGACUUACCAACCCGAUGCAAACUGCGAAUACCGGAGAAUGUUAUCACGGGAGACACACGGCGGGUGCUA
ACGUCCGUCGUGAAGAGGGAAACAACCCAGACCGCCAGCUAAGGUCCCAAAGUCAUGGUUAAGUGGGAAACGAUGUGGGA
AGGCCCAGACAGCCAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCACUGGUCGAGUCGGCCU
GCGCGGAAGAUGUAACGGGGCUAAACCAUGCACCGAAGCUGCGGCAGCGACGCUUAUGCGUUGUUGGGUAGGGGAGCGUU
CUGUAAGCCUGCGAAGGUGUGCUGUGAGGCAUGCUGGAGGUAUCAGAAGUGCGAAUGCUGACAUAAGUAACGAUAAAGCG
GGUGAAAAGCCCGCUCGCCGGAAGACCAAGGGUUCCUGUCCAACGUUAAUCGGGGCAGGGUGAGUCGACCCCUAAGGCGA
GGCCGAAAGGCGUAGUCGAUGGGAAACAGGUUAAUAUUCCUGUACUUGGUGUUACUGCGAAGGGGGGACGGAGAAGGCUA
UGUUGGCCGGGCGACGGUUGUCCCGGUUUAAGCGUGUAGGCUGGUUUUCCAGGCAAAUCCGGAAAAUCAAGGCUGAGGCG
UGAUGACGAGGCACUACGGUGCUGAAGCAACAAAUGCCCUGCUUCCAGGAAAAGCCUCUAAGCAUCAGGUAACAUCAAAU
CGUACCCCAAACCGACACAGGUGGUCAGGUAGAGAAUACCAAGGCGCUUGAGAGAACUCGGGUGAAGGAACUAGGCAAAA
UGGUGCCGUAACUUCGGGAGAAGGCACGCUGAUAUGUAGGUGAGGUCCCUCGCGGAUGGAGCUGAAAUCAGUCGAAGAUA
CCAGCUGGCUGCAACUGUUUAUUAAAAACACAGCACUGUGCAAACACGAAAGUGGACGUAUACGGUGUGACGCCUGCCCG
GUGCCGGAAGGUUAAUUGAUGGGGUUAGCGCAAGCGAAGCUCUUGAUCGAAGCCCCGGUAAACGGCGGCCGUAACUAUAA
CGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAUGGCGUAAUGAUGGCCAGGCUGUCUCCAC
CCGAGACUCAGUGAAAUUGAACUCGCUGUGAAGAUGCAGUGUACCCGCGGCAAGACGGAAAGACCCCGUGAACCUUUACU
AUAGCUUGACACUGAACAUUGAGCCUUGAUGUGUAGGAUAGGUGGGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGAG
CCGACCUUGAAAUACCACCCUUUAAUGUUUGAUGUUCUAACGUUGACCCGUAAUCCGGGUUGCGGACAGUGUCUGGUGGG
UAGUUUGACUGGGGCGGUCUCCUCCUAAAGAGUAACGGAGGAGCACGAAGGUUGGCUAAUCCUGGUCGGACAUCAGGAGG
UUAGUGCAAUGGCAUAAGCCAGCUUGACUGCGAGCGUGACGGCGCGAGCAGGUGCGAAAGCAGGUCAUAGUGAUCCGGUG
GUUCUGAAUGGAAGGGCCAUCGCUCAACGGAUAAAAGGUACUCCGGGGAUAACAGGCUGAUACCGCCCAAGAGUUCAUAU
CGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCACAUCCUGGGGCUGAAGUAGGUCCCAAGGGUAUGGCUGUUCGCC
AUUUAAAGUGGUACGCGAGCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCCGUGGGCGCUGGAGAACUGA
GGGGGGCUGCUCCUAGUACGAGAGGACCGGAGUGGACGCAUCACUGGUGUUCGGGUUGUCAUGCCAAUGGCACUGCCCGG
UAGCUAAAUGCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCACGAAACUUGCCCCGAGAUGAGUUCUCCCUGACCCUUUA
AGGGUCCUGAAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGCGCAGCGAUGCGUUGAGCUAACCGGUA
CUAAUGAACCGUGA
>URS00000FC91C_316407 Escherichia coli str. K-12 substr. W3110 DicF RNA
UUCUGGUGACGUUUGGCGGUAUCAGUUUUACUCCGUGACUGCUCUGCCGCCC
>URS0000220D16_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GGAAGUGUGGCCGAGCGGUUGAAGGCACCGGUCUUGAAAACCGGCGACCCGAAAGGGUUCCAGAGUUCGAAUCUCUGCGC
UUCCG
>URS000012CA7F_316407 Escherichia coli str. K-12 substr. W3110 RyhB RNA
GAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUUUUUU
>URS000012CA7F_316385 Escherichia coli str. K-12 substr. DH10B RyhB RNA
GAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUUUUUU
>URS000000D27B_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GCCGACUUAGCUCAGUAGGUAGAGCAACUGACUUGUAAUCAGUAGGUCACCAGUUCGAUUCCGGUAGUCGGCA
>URS00003A2B7A_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GCGAAGGUGGCGGAAUUGGUAGACGCGCUAGCUUCAGGUGUUAGUGUUCUUACGGACGUGGGGGUUCAAGUCCCCCCCCU
CGCA
>URS00005A30CB_879462 Escherichia coli str. K-12 substr. MG1655star Selenocysteine transfer RNA
GGAAGAUCGUCGUCUCCGGUGAGGCGGCUGGACUUCAAAUCCAGUUGGGGCCGCCAGCGGUCCCGGGCAGGUUCGACUCC
UGUGAUCUUCC
>URS000060D281_316407 Escherichia coli str. K-12 substr. W3110 tRNA
UGGGGUAUCGCCAAGCGGUAAGGCACCGGUUUUUGAUACCGGCAUUCCCUGGUUCGAAUCCAGGUACCCCAG
>URS000060D281_316385 Escherichia coli str. K-12 substr. DH10B tRNA
UGGGGUAUCGCCAAGCGGUAAGGCACCGGUUUUUGAUACCGGCAUUCCCUGGUUCGAAUCCAGGUACCCCAG
>URS00003B7AB3_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GGUGGGGUUCCCGAGCGGCCAAAGGGAGCAGACUGUAAAUCUGCCGUCACAGACUUCGAAGGUUCGAAUCCUUCCCCCAC
CA
>URS00006D59D3_316385 Escherichia coli str. K-12 substr. DH10B rdlD antitoxin
GUCUGGUUUCAAGAUUAGCCCCCGUUUUGUUGUCAGGUUUUACCUCUCAACGUGCGGGGGUUUUCU
>URS0000619CBC_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GCGAAGGUGGCGGAAUUGGUAGACGCGCUAGCUUCAGGUGUUAGUGUCCUUACGGACGUGGGGGUUCAAGUCCCCCCCCU
CGCA
>URS000048E3DD_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
UGGGGUAUCGCCAAGCGGUAAGGCACCGGAUUCUGAUUCCGGCAUUCCGAGGUUCGAAUCCUCGUACCCCAG
>URS000048E3DD_316385 Escherichia coli str. K-12 substr. DH10B tRNA
UGGGGUAUCGCCAAGCGGUAAGGCACCGGAUUCUGAUUCCGGCAUUCCGAGGUUCGAAUCCUCGUACCCCAG
>URS00003BE008_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
CGGCGAGUAGCGCAGCUUGGUAGCGCAACUGGUUUGGGACCAGUGGGUCGGAGGUUCGAAUCCUCUCUCGCCGA
>URS0000927275_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial large subunit ribosomal RNA
AUAGACCCGAACCCGGUGAUCUAGCCAUGGGCAGGUUGAAGGUUGGGUAACACUAACUGGAGGACCGAACCGACUAAUGU
UGAAAAUUAGCGGAUGACUUGUGGCUGGGGGUGAAAGGCCAAUCAAACCGGGAGAUAGCUGGUUCUCCCCGAAAGCUAUU
UAGGUAGCGCCUCGUGAAUUCAUCUCCGGGGGUAGAGCACUGUUUCGGCAAGGGGGUCAUCCCGACUUACCAACCCGAUG
CAAACUGCGAAUACCGGAGAAUGUUAUCACGGGAGACACACGGCGGGUGCUAACGUCCGUCGUGAAGAGGGAAACAACCC
AGACCGCCAGCUAAGGUCCCAAAGUCAUGGUUAAGUGGGAAACGAUGUGGGAAGGCCCAGACAGCCAGGAUGUUGGCUUA
GAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCACUGGUCGAGUCGGCCUGCGCGGAAGAUGUAACGGGGCUAAACCA
UGCACCGAAGCUGCGGCAGCGACACUAUGUGUUGUUGGGUAGGGGAGCGUUCUGUAAGCCUGUGAAGGUGUGCUGUGAGG
CAUGCUGGAGGUAUCAGAAGUGCGAAUGCUGACAUAAGUAACGAUAAAGCGGGUGAAAAGCCCGCUCGCCGGAAGACCAA
GGGUUCCUGUCCAACGUUAAUCGGGGCAGGGUGAGUCGACCCCUAAGGCGAGGCCGAAAGGCGUAGUCGAUGGGAAACAG
GUUAAUAUUCCUGUACUUGGUGUUACUGCGAAGGGGGGACGGAGAAGGCUAUGUUGGCCGGGCGACGGUUGUCCCGGUUU
AAGCGUGUAGGCUGGUUUCCAGGCAAAUCCGGAAAAUCAAGGCUGAGGCGUGAUGACGAGGCACUACGGUGCUGAAGCAA
CAAAUGCCCUGCUUCCAGGAAAAGCCUCUAAGCAUCAGGUAACAUCAAAUCGUACCCCAAACCGACACAGGUGGUCAGGU
AGAGAAUACCAAGGCG
>URS00006F98B3_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial small subunit ribosomal RNA
CCUGGGAACUGCAUCUGAUACUGGAAGCGUUGGAACCGUAAAGGGUUUGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAG
AUCUGGAGGAAUACCGGUGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAG
GAUUAGAUACCCUGGUAGUCCACGCCGUAAACGAUGUCGACUUGGAGGUUGUGCCCUUGAGGCGUGGCUUCCGGAGCUAA
CGCGUUAAGUCGACCGCCUGGGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGG
AGCAUGUGGUUUAAUUCGAUGCAACGCGAAGAACCUUACCUGGUCUUGACAUCCACAGAACUUUCCAGAGAUGGAUUGGU
GCCUUCGGGAACUGUGAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGA
GCGCAACCCUUAUCUUUUGUUGCCAGCGGUCCGGCCGGGAACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGG
GGAUGACGUCAAGUCAUCAUGGCCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUC
GCGAGAGCAAGCGGACCUCAUAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCU
AGUAAUCGUGGAUCAGAAUGCCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUU
GCAAAAGAAGUAGGUAGCUUAACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUAACAAGG
UAACCGUAGGGGAACCUGCGGUUGGAUCACCUCCUUA
>URS00003ABDF1_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GGAGCGGUAGUUCAGUCGGUUAGAAUACCUGCCUGUCACGCAGGGGGUCGCGGGUUCGAGUCCCGUCCGUUCCG
>URS00000773A8_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GCCGAUAUAGCUCAGUUGGUAGAGCAGCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCGGCA
>URS000057DE4D_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GGUGGGGUUCCCGAGCGGCCAAAGGGAGCAGACUGUAAAUCUGCCGUCAUCGACUUCGAAGGUUCGAAUCCUUCCCCCAC
CA
>URS00003BE008_316407 Escherichia coli str. K-12 substr. W3110 tRNA
CGGCGAGUAGCGCAGCUUGGUAGCGCAACUGGUUUGGGACCAGUGGGUCGGAGGUUCGAAUCCUCUCUCGCCGA
>URS0000ABB2B1_879462 Escherichia coli str. K-12 substr. MG1655star Archaeal large subunit ribosomal RNA
AGGUUAAGCGACUAAGCGUACACGGUGGAUGCCCUGGCAGUCAGAGGCGAUGAAGGACGUGCUAAUCUGCGAUAAGCGUC
GGUAAGGUGAUAUGAACCGUUAUAACCGGCGAUUUCCGAAUGGGGAAACCCAGUGUGUUUCGACACACUAUCAUUAACUG
AAUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCC
CAGUAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCUGAAUCAGUGUGUGUGUUAGUGGAAGCGUCUGGAAAGGCGCGCG
AUACAGGGUGACAGCCCCGUACACAAAAAUGCACAUGCUGUGAGCUCGAUGAGUAGGGCGGGACACGUGGUAUCCUGUCU
GAAUAUGGGGGGACCAUCCUCCAAGGCUAAAUACUCCUGACUGACCGAUAGUGAACCAGUACCGUGAGGGAAAGGCGAAA
AGAACCCCGGCGAGGGGAGUGAAAAAGAACCUGAAACCGUGUACGUACAAGCAGUGGGAGCAUGCUUAGGCGUGUGACUG
CGUACCUUUUGUAUAAUGGGUCAGCGACUUAUAUUCUGUAGCAAGGUUAACCGAAUAGGGGAGCCGAAGGGAAACCGAGU
CUUAACUGGGCGUUAAGUUGCAGGGUAUAGACCCGAAACCCGGUGAUCUAGCCAUGGGCAGGUUGAAGGUUGGGUAACAC
UAACUGGAGGACCGAACCGACUAAUGUUGAAAAAUUAGCGGAUGACUUGUGGCUGGGGGUGAAAGGCCAAUCAAACCGGG
AGAUAGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGUGAACUCAUCUCCGGGGGUAGAGCACUGUUUCGGCAAG
GGGGUCAUCCCGACUUACCAACCCGAUGCAAACUGCGAAUACCGGAGAAUGUUAUCACGGGAGACACACGGCGGGUGCUA
ACGUCCGUCGUGAAGAGGGAAACAACCCAGACCGCCAGCUAAGGUCCCAAAGUCAUGGUUAAGUGGGAAACGAUGUGGGA
AGGCCCAGACAGCCAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCACUGGUCGAGUCGGCCU
GCGCGGAAGAUGUAACGGGGCUAAACCAUGCACCGAAGCUGCGGCAGCGACGCUUAUGCGUUGUUGGGUAGGGGAGCGUU
CUGUAAGCCUGUGAAGGUGUACUGUGAGGUAUGCUGGAGGUAUCAGAAGUGCGAAUGCUGACAUAAGUAACGAUAAAGCG
GGUGAAAAGCCCGCUCGCCGGAAGACCAAGGGUUCCUGUCCAACGUUAAUCGGGGCAGGGUGAGUCGACCCCUAAGGCGA
GGCCGAAAGGCGUAGUCGAUGGGAAACAGGUUAAUAUUCCUGUACUUGGUGUUACUGCGAAGGGGGGACGGAGAAGGCUA
UGUUGGCCGGGCGACGGUUGUCCCGGUUUAAGCGUGUAGGCUGGUUUUCCAGGCAAAUCCGGAAAAUCAAGGCUGAGGCG
UGAUGACGAGGCACUACGGUGCUGAAGCAACAAAUGCCCUGCUUCCAGGAAAAGCCUCUAAGCAUCAGGUAACAUCAAAU
CGUACCCCAAACCGACACAGGUGGUCAGGUAGAGAAUACCAAGGCGCUUGAGAGAACUCGGGUGAAGGAACUAGGCAAAA
UGGUGCCGUAACUUCGGGAGAAGGCA
>URS0000ABB507_316407 Escherichia coli str. K-12 substr. W3110 Eukaryotic large subunit ribosomal RNA
AAUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCC
CAGUAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCUGAAUCAGUGUGUGUGUUAGUGGAAGCGUCUGGAAAGGCGCGCG
AUACAGGGUGACAGCCCCGUACACAAAAAUGCACAUGCUGUGAGCUCGAUGAGUAGGGCGGGACACGUGGUAUCCUGUCU
GAAUAUGGGGGGACCAUCCUCCAAGGCUAAAUACUCCUGACUGACCGAUAGUGAACCAGUACCGUGAGGGAAAGGCGAAA
AGAACCCCGGCGAGGGGAGUGAAAAAGAACCUGAAACCGUGUACGUACAAGCAGUGGGAGCACGCUUAGGCGUGUGACUG
CGUACCUUUUGUAUAAUGGGUCAGCGACUUAUAUUCUGUAGCAAGGUUAACCGAAUAGGGGAGCCGAAGGGAAACCGAGU
CUUAACUGGGCGUUAAGUUGCAGGGUAUAGACCCGAAACCCGGUGAUCUAGCCAUGGGCAGGUUGAAGGUUGGGUAACAC
UAACUGGAGGACCGAACCGACUAAUGUUGAAAAAUUAGCGGAUGACUUGUGGCUGGGGGUGAAAGGCCAAUCAAACCGGG
AGAUAGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGUGAAUUCAUCUCCGGGGGUAGAGCACUGUUUCGGCAAG
GGGGUCAUCCCGACUUACCAACCCGAUGCAAACUGCGAAUACCGGAGAAUGUUAUCACGGGAGACACACGGCGGGUGCUA
ACGUCCGUCGUGAAGAGGGAAACAACCCAGACCGCCAGCUAAGGUCCCAAAGUCAUGGUUAAGUGGGAAACGAUGUGGGA
AGGCCCAGACAGCCAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCACUGGUCGAGUCGGCCU
GCGCGGAAGAUGUAACGGGGCUAAACCAUGCACCGAAGCUGCGGCAGCGACGCUUAUGCGUUGUUGGGUAGGGGAGCGUU
CUGUAAGCCUGCGAAGGUGUGCUGUGAGGCAUGCUGGAGGUAUCAGAAGUGCGAAUGCUGACAUAAGUAACGAUAAAGCG
GGUGAAAAGCCCGCUCGCCGGAAGACCAAGGGUUCCUGUCCAACGUUAAUCGGGGCAGGGUGAGUCGACCCCUAAGGCGA
GGCCGAAAGGCGUAGUCGAUGGGAAACAGGUUAAUAUUCCUGUACUUGGUGUUACUGCGAAGGGGGGACGGAGAAGGCUA
UGUUGGCCGGGCGACGGUUGUCCCGGUUUAAGCGUGUAGGCUGGUUUUCCAGGCAAAUCCGGAAAAUCAAGGCUGAGGCG
UGAUGACGAGGCACUACGGUGCUGAAGCAACAAAUGCCCUGCUUCCAGGAAAAGCCUCUAAGCAUCAGGUAACAUCAAAU
CGUACCCCAAACCGACACAGGUGGUCAGGUAGAGAAUACCAAGGCGCUUGAGAGAACUCGGGUGAAGGAACUAGGCAAAA
UGGUGCCGUAACUUCGGGAGAAGGCACGCUGAUAUGUAGGUGAAGCGACUUGCUCGUGGAGCUGAAAUCAGUCGAAGAUA
CCAGCUGGCUGCAACUGUUUAUUAAAAACACAGCACUGUGCAAACACGAAAGUGGACGUAUACGGUGUGACGCCUGCCCG
GUGCCGGAAGGUUAAUUGAUGGGGUUAGCGCAAGCGAAGCUCUUGAUCGAAGCCCCGGUAAACGGCGGCCGUAACUAUAA
CGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAUGGCGUAAUGAUGGCCAGGCUGUCUCCAC
CCGAGACUCAGUGAAAUUGAACUCGCUGUGAAGAUGCAGUGUACCCGCGGCAAGACGGAAAGACCCCGUGAACCUUUACU
AUAGCUUGACACUGAACAUUGAGCCUUGAUGUGUAGGAUAGGUGGGAGGCUUAGAAGUGUGGACGCCAGUCUGCAUGGAG
CCGACCUUGAAAUACCACCCUUUAAUGUUUGAUGUUCUAACGUUGACCCGUAAUCCGGGUUGCGGACAGUGUCUGGUGGG
UAGUUUGACUGGGGCGGUCUCCUCCUAAAGAGUAACGGAGGAGCACGAAGGUUGGCUAAUCCUGGUCGGACAUCAGGAGG
UUAGUGCAAUGGCAUAAGCCAGCUUGACUGCGAGCGUGACGGCGCGAGCAGGUGCGAAAGCAGGUCAUAGUGAUCCGGUG
GUUCUGAAUGGAAGGGCCAUCGCUCAACGGAUAAAAGGUACUCCGGGGAUAACAGGCUGAUACCGCCCAAGAGUUCAUAU
CGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCACAUCCUGGGGCUGAAGUAGGUCCCAAGGGUAUGGCUGUUCGCC
AUUUAAAGUGGUACGCGAGCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCCGUGGGCGCUGGAGAACUGA
GGGGGGCUGCUCCUAGUACGAGAGGACCGGAGUGGACGCAUCACUGGUGUUCGGGUUGUCAUGCCAAUGGCACUGCCCGG
UAGCUAAAUGCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCACGAAACUUGCCCCGAGAUGAGUUCUCCCUGACCCUUUA
AGGGUCCUGAAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGCGCAGCGAUGCGUUGAGCUAACCGGUA
CUAAUGAACCGUGA
>URS0000ABB507_316385 Escherichia coli str. K-12 substr. DH10B Eukaryotic large subunit ribosomal RNA
AAUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCC
CAGUAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCUGAAUCAGUGUGUGUGUUAGUGGAAGCGUCUGGAAAGGCGCGCG
AUACAGGGUGACAGCCCCGUACACAAAAAUGCACAUGCUGUGAGCUCGAUGAGUAGGGCGGGACACGUGGUAUCCUGUCU
GAAUAUGGGGGGACCAUCCUCCAAGGCUAAAUACUCCUGACUGACCGAUAGUGAACCAGUACCGUGAGGGAAAGGCGAAA
AGAACCCCGGCGAGGGGAGUGAAAAAGAACCUGAAACCGUGUACGUACAAGCAGUGGGAGCACGCUUAGGCGUGUGACUG
CGUACCUUUUGUAUAAUGGGUCAGCGACUUAUAUUCUGUAGCAAGGUUAACCGAAUAGGGGAGCCGAAGGGAAACCGAGU
CUUAACUGGGCGUUAAGUUGCAGGGUAUAGACCCGAAACCCGGUGAUCUAGCCAUGGGCAGGUUGAAGGUUGGGUAACAC
UAACUGGAGGACCGAACCGACUAAUGUUGAAAAAUUAGCGGAUGACUUGUGGCUGGGGGUGAAAGGCCAAUCAAACCGGG
AGAUAGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGUGAAUUCAUCUCCGGGGGUAGAGCACUGUUUCGGCAAG
GGGGUCAUCCCGACUUACCAACCCGAUGCAAACUGCGAAUACCGGAGAAUGUUAUCACGGGAGACACACGGCGGGUGCUA
ACGUCCGUCGUGAAGAGGGAAACAACCCAGACCGCCAGCUAAGGUCCCAAAGUCAUGGUUAAGUGGGAAACGAUGUGGGA
AGGCCCAGACAGCCAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCACUGGUCGAGUCGGCCU
GCGCGGAAGAUGUAACGGGGCUAAACCAUGCACCGAAGCUGCGGCAGCGACGCUUAUGCGUUGUUGGGUAGGGGAGCGUU
CUGUAAGCCUGCGAAGGUGUGCUGUGAGGCAUGCUGGAGGUAUCAGAAGUGCGAAUGCUGACAUAAGUAACGAUAAAGCG
GGUGAAAAGCCCGCUCGCCGGAAGACCAAGGGUUCCUGUCCAACGUUAAUCGGGGCAGGGUGAGUCGACCCCUAAGGCGA
GGCCGAAAGGCGUAGUCGAUGGGAAACAGGUUAAUAUUCCUGUACUUGGUGUUACUGCGAAGGGGGGACGGAGAAGGCUA
UGUUGGCCGGGCGACGGUUGUCCCGGUUUAAGCGUGUAGGCUGGUUUUCCAGGCAAAUCCGGAAAAUCAAGGCUGAGGCG
UGAUGACGAGGCACUACGGUGCUGAAGCAACAAAUGCCCUGCUUCCAGGAAAAGCCUCUAAGCAUCAGGUAACAUCAAAU
CGUACCCCAAACCGACACAGGUGGUCAGGUAGAGAAUACCAAGGCGCUUGAGAGAACUCGGGUGAAGGAACUAGGCAAAA
UGGUGCCGUAACUUCGGGAGAAGGCACGCUGAUAUGUAGGUGAAGCGACUUGCUCGUGGAGCUGAAAUCAGUCGAAGAUA
CCAGCUGGCUGCAACUGUUUAUUAAAAACACAGCACUGUGCAAACACGAAAGUGGACGUAUACGGUGUGACGCCUGCCCG
GUGCCGGAAGGUUAAUUGAUGGGGUUAGCGCAAGCGAAGCUCUUGAUCGAAGCCCCGGUAAACGGCGGCCGUAACUAUAA
CGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAUGGCGUAAUGAUGGCCAGGCUGUCUCCAC
CCGAGACUCAGUGAAAUUGAACUCGCUGUGAAGAUGCAGUGUACCCGCGGCAAGACGGAAAGACCCCGUGAACCUUUACU
AUAGCUUGACACUGAACAUUGAGCCUUGAUGUGUAGGAUAGGUGGGAGGCUUAGAAGUGUGGACGCCAGUCUGCAUGGAG
CCGACCUUGAAAUACCACCCUUUAAUGUUUGAUGUUCUAACGUUGACCCGUAAUCCGGGUUGCGGACAGUGUCUGGUGGG
UAGUUUGACUGGGGCGGUCUCCUCCUAAAGAGUAACGGAGGAGCACGAAGGUUGGCUAAUCCUGGUCGGACAUCAGGAGG
UUAGUGCAAUGGCAUAAGCCAGCUUGACUGCGAGCGUGACGGCGCGAGCAGGUGCGAAAGCAGGUCAUAGUGAUCCGGUG
GUUCUGAAUGGAAGGGCCAUCGCUCAACGGAUAAAAGGUACUCCGGGGAUAACAGGCUGAUACCGCCCAAGAGUUCAUAU
CGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCACAUCCUGGGGCUGAAGUAGGUCCCAAGGGUAUGGCUGUUCGCC
AUUUAAAGUGGUACGCGAGCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCCGUGGGCGCUGGAGAACUGA
GGGGGGCUGCUCCUAGUACGAGAGGACCGGAGUGGACGCAUCACUGGUGUUCGGGUUGUCAUGCCAAUGGCACUGCCCGG
UAGCUAAAUGCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCACGAAACUUGCCCCGAGAUGAGUUCUCCCUGACCCUUUA
AGGGUCCUGAAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGCGCAGCGAUGCGUUGAGCUAACCGGUA
CUAAUGAACCGUGA
>URS000034CDF1_316407 Escherichia coli str. K-12 substr. W3110 Bacterial antisense RNA HPnc0260
UGUAACAAAGUUGCCAUAGCGAUUCUCCUUCUGAUAACGCAUACGAAGACAGUGUAAAUCUUUUAACGUAUUGGAUACAG
AGAAGAAACAGAGGGAAAAAGGAGAAGACCAGAUUAAGAAAAUCUGGUGCGUCCGAGUGGACUCGAACCACCGACCCCCA
CCA
>URS0000230EE1_316385 Escherichia coli str. K-12 substr. DH10B tRNA
CGGCACGUAGCGCAGCCUGGUAGCGCACCGUCAUGGGGUGUCGGGGGUCGGAGGUUCAAAUCCUCUCGUGCCGA
>URS00001A3D5B_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GGCCCUUUAGCUCAGUGGUUAGAGCAGGCGACUCAUAAUCGCUUGGUCGCUGGUUCAAGUCCAGCAAGGGCCA
>URS00001A3D5B_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GGCCCUUUAGCUCAGUGGUUAGAGCAGGCGACUCAUAAUCGCUUGGUCGCUGGUUCAAGUCCAGCAAGGGCCA
>URS00003821D9_316407 Escherichia coli str. K-12 substr. W3110 tRNA
CGGUGAUUGGCGCAGCCUGGUAGCGCACUUCGUUCGGGACGAAGGGGUCGGAGGUUCGAAUCCUCUAUCACCGA
>URS000020E66C_879462 Escherichia coli str. K-12 substr. MG1655star SymR antitoxin
AGUCAUAACUGCUAUUCUCCAGGAAUAGUGAUUGUGAUUAGCGAUGCGGGUGUGUUGGCGCACAUCCGCACCGCGCU
>URS00000672E8_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GCGGGCGUAGUUCAAUGGUAGAACGAGAGCUUCCCAAGCUCUAUACGAGGGUUCGAUUCCCUUCGCCCGCU
>URS000040CF9C_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GGAGAGAUGCCGGAGCGGCUGAACGGACCGGUCUCGAAAACCGGAGUAGGGGCAACUCUACCGGGGGUUCAAAUCCCCCU
CUCUCCG
>URS00005A1717_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GGGGCUAUAGCUCAGCUGGGAGAGCGCCUGCUUUGCACGCAGGAGGUCUGCGGUUCGAUCCCGCAUAGCUCCA
>URS00005A30CB_316407 Escherichia coli str. K-12 substr. W3110 Selenocysteine transfer RNA
GGAAGAUCGUCGUCUCCGGUGAGGCGGCUGGACUUCAAAUCCAGUUGGGGCCGCCAGCGGUCCCGGGCAGGUUCGACUCC
UGUGAUCUUCC
>URS00000773A8_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GCCGAUAUAGCUCAGUUGGUAGAGCAGCGCAUUCGUAAUGCGAAGGUCGUAGGUUCGACUCCUAUUAUCGGCA
>URS0000422428_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GGCUACGUAGCUCAGUUGGUUAGAGCACAUCACUCAUAAUGAUGGGGUCACAGGUUCGAAUCCCGUCGUAGCCA
>URS000048E3DD_316407 Escherichia coli str. K-12 substr. W3110 tRNA
UGGGGUAUCGCCAAGCGGUAAGGCACCGGAUUCUGAUUCCGGCAUUCCGAGGUUCGAAUCCUCGUACCCCAG
>URS00006DB421_83333 Escherichia coli K-12 transfer-messenger RNA
GGGGCUGAUUCUGGAUUCGACGGGAUUUGCGAAACCCAAGGUGCAUGCCGAGGGGCGGUUGGCCUCGUAAAAAGCCGCAA
AAAAUAGUCGCAAACGACGAAAACUACGCUUUAGCAGCUUAAUAACCUGCUUAGAGCCCUCUCUCCCUAGCCUCCGCUCU
UAGGACGGGGAUCAAGAGAGGUCAAACCCAAAAGAGAUCGCGUGGAAGCCCUGCCUGGGGUUGAAGCGUUAAAACUUAAU
CAGGCUAGUUUGUUAGUGGCGUGUCCGUCCGCAGCUGGCAAGCGAAUGUAAAGACUGACUAAGCAUGUAGUACCGAGGAU
GUAGGAAUUUCGGACGCGGGUUCAACUCCCGCCAGCCCACCA
>URS00005E0705_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GCAUCCGUAGCUCAGCUGGAUAGAGUACUCGGCUACGAACCGAGCGGUCGGAGGUUCGAAUCCUCCCGGAUGCA
>URS00005E0705_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GCAUCCGUAGCUCAGCUGGAUAGAGUACUCGGCUACGAACCGAGCGGUCGGAGGUUCGAAUCCUCCCGGAUGCA
>URS000041E8EC_316407 Escherichia coli str. K-12 substr. W3110 tRNA
CGCGGGGUGGAGCAGCCUGGUAGCUCGUCGGGCUCAUAACCCGAAGGUCGUCGGUUCAAAUCCGGCCCCCGCAA
>URS000041E8EC_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
CGCGGGGUGGAGCAGCCUGGUAGCUCGUCGGGCUCAUAACCCGAAGGUCGUCGGUUCAAAUCCGGCCCCCGCAA
>URS000041E8EC_316385 Escherichia coli str. K-12 substr. DH10B tRNA
CGCGGGGUGGAGCAGCCUGGUAGCUCGUCGGGCUCAUAACCCGAAGGUCGUCGGUUCAAAUCCGGCCCCCGCAA
>URS0000425B5A_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
UCCUCUGUAGUUCAGUCGGUAGAACGGCGGACUGUUAAUCCGUAUGUCACUGGUUCGAGUCCAGUCAGAGGAG
>URS00003DC4B1_316385 Escherichia coli str. K-12 substr. DH10B 5S ribosomal RNA
CCUGGCGGCCGUAGCGCGGUGGUCCCACCUGACCCCAUGCCGAACUCAGAAGUGAAACGCCGUAGCGCCGAUGGUAGUGU
GGGGUCUCCCCAUGCGAGAGUAGGGAACUGCCAGGC
>URS00004BB8BB_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial RNase P class A
GAAGCUGACCAGACAGUCGCCGCUUCGUCGUCGUCCUCUUCGGGGGAGACGGGCGGAGGGGAGGAAAGUCCGGGCUCCAU
AGGGCAGGGUGCCAGGUAACGCCUGGGGGGGAAACCCACGACCAGUGCAACAGAGAGCAAACCGCCGAUGGCCCGCGCAA
GCGGGAUCAGGUAAGGGUGAAAGGGUGCGGUAAGAGCGCACCGCGCGGCUGGUAACAGUCCGUGGCACGGUAAACUCCAC
CCGGAGCAAGGCCAAAUAGGGGUUCAUAAGGUACGGCCCGUACUGAACCCGGGUAGGCUGCUUGAGCCAGUGAGCGAUUG
CUGGCCUAGAUGAAUGACUGUCCACGACAGAACCCGGCUUAUCGGUCAGUUUCACCU
>URS0000663AD5_316407 Escherichia coli str. K-12 substr. W3110 rdlD antitoxin
GUUCUGGUUCAAGAUUAGCCCCCGUUCUGUUGUCAGGUUGUACCUCUCAACGUGCGGGGGUUUUCU
>URS0000663AD5_879462 Escherichia coli str. K-12 substr. MG1655star rdlD antitoxin
GUUCUGGUUCAAGAUUAGCCCCCGUUCUGUUGUCAGGUUGUACCUCUCAACGUGCGGGGGUUUUCU
>URS0000663AD5_316385 Escherichia coli str. K-12 substr. DH10B rdlD antitoxin
GUUCUGGUUCAAGAUUAGCCCCCGUUCUGUUGUCAGGUUGUACCUCUCAACGUGCGGGGGUUUUCU
>URS00000672E8_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GCGGGCGUAGUUCAAUGGUAGAACGAGAGCUUCCCAAGCUCUAUACGAGGGUUCGAUUCCCUUCGCCCGCU
>URS00006A9175_316407 Escherichia coli str. K-12 substr. W3110 sok antitoxin
GGGUGCUUGAGGCUGUCUGGCGUUAAGCAUUCGCGAGGUUCCAGAUGGACAAAAGCCCCAGGCGAUAUUUCUAUCAACCU
GAGGCCAGCGUUCGAACCCAAACAAUUCGAAUGUUAGUCUCUUCUUUGCAGGGAGGCAAGACAUGUGUAUAUCACU
>URS00006A9175_879462 Escherichia coli str. K-12 substr. MG1655star sok antitoxin
GGGUGCUUGAGGCUGUCUGGCGUUAAGCAUUCGCGAGGUUCCAGAUGGACAAAAGCCCCAGGCGAUAUUUCUAUCAACCU
GAGGCCAGCGUUCGAACCCAAACAAUUCGAAUGUUAGUCUCUUCUUUGCAGGGAGGCAAGACAUGUGUAUAUCACU
>URS00006A9175_316385 Escherichia coli str. K-12 substr. DH10B sok antitoxin
GGGUGCUUGAGGCUGUCUGGCGUUAAGCAUUCGCGAGGUUCCAGAUGGACAAAAGCCCCAGGCGAUAUUUCUAUCAACCU
GAGGCCAGCGUUCGAACCCAAACAAUUCGAAUGUUAGUCUCUUCUUUGCAGGGAGGCAAGACAUGUGUAUAUCACU
>URS0000457934_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GCGCCCUUAGCUCAGUUGGAUAGAGCAACGACCUUCUAAGUCGUGGGCCGCAGGUUCGAAUCCUGCAGGGCGCG
>URS0000425B5A_316385 Escherichia coli str. K-12 substr. DH10B tRNA
UCCUCUGUAGUUCAGUCGGUAGAACGGCGGACUGUUAAUCCGUAUGUCACUGGUUCGAGUCCAGUCAGAGGAG
>URS00003BE008_316385 Escherichia coli str. K-12 substr. DH10B tRNA
CGGCGAGUAGCGCAGCUUGGUAGCGCAACUGGUUUGGGACCAGUGGGUCGGAGGUUCGAAUCCUCUCUCGCCGA
>URS00006D59D3_316407 Escherichia coli str. K-12 substr. W3110 rdlD antitoxin
GUCUGGUUUCAAGAUUAGCCCCCGUUUUGUUGUCAGGUUUUACCUCUCAACGUGCGGGGGUUUUCU
>URS00006D59D3_879462 Escherichia coli str. K-12 substr. MG1655star rdlD antitoxin
GUCUGGUUUCAAGAUUAGCCCCCGUUUUGUUGUCAGGUUUUACCUCUCAACGUGCGGGGGUUUUCU
>URS00003ABDF1_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GGAGCGGUAGUUCAGUCGGUUAGAAUACCUGCCUGUCACGCAGGGGGUCGCGGGUUCGAGUCCCGUCCGUUCCG
>URS00005E0705_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GCAUCCGUAGCUCAGCUGGAUAGAGUACUCGGCUACGAACCGAGCGGUCGGAGGUUCGAAUCCUCCCGGAUGCA
>URS0000619CBC_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GCGAAGGUGGCGGAAUUGGUAGACGCGCUAGCUUCAGGUGUUAGUGUCCUUACGGACGUGGGGGUUCAAGUCCCCCCCCU
CGCA
>URS0000422428_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GGCUACGUAGCUCAGUUGGUUAGAGCACAUCACUCAUAAUGAUGGGGUCACAGGUUCGAAUCCCGUCGUAGCCA
>URS00003ABDF1_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GGAGCGGUAGUUCAGUCGGUUAGAAUACCUGCCUGUCACGCAGGGGGUCGCGGGUUCGAGUCCCGUCCGUUCCG
>URS00003B7AB3_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GGUGGGGUUCCCGAGCGGCCAAAGGGAGCAGACUGUAAAUCUGCCGUCACAGACUUCGAAGGUUCGAAUCCUUCCCCCAC
CA
>URS00005A1717_316407 Escherichia coli str. K-12 substr. W3110 tRNA
GGGGCUAUAGCUCAGCUGGGAGAGCGCCUGCUUUGCACGCAGGAGGUCUGCGGUUCGAUCCCGCAUAGCUCCA
>URS000060D281_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
UGGGGUAUCGCCAAGCGGUAAGGCACCGGUUUUUGAUACCGGCAUUCCCUGGUUCGAAUCCAGGUACCCCAG
>URS000054897F_83333 Escherichia coli K-12 tRNA
GGGGCUAUAGCUCAGCUGGGAGAGCGCUUGCAUGGCAUGCAAGAGGUCAGCGGUUCGAUCCCGCUUAGCUCCA
>URS000054897F_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GGGGCUAUAGCUCAGCUGGGAGAGCGCUUGCAUGGCAUGCAAGAGGUCAGCGGUUCGAUCCCGCUUAGCUCCA
>URS00005833D6_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial small signal recognition particle RNA
UGUUGGUUCUCCCGCAACGCUACUCUGUUUACCAGGUCAGGUCCGGAAGGAAGCAGCCAAGGCAGAUGACGCGUGUGCCG
GGAUGUAGCUGGCAGGG
>URS00005833D6_316385 Escherichia coli str. K-12 substr. DH10B Bacterial small signal recognition particle RNA
UGUUGGUUCUCCCGCAACGCUACUCUGUUUACCAGGUCAGGUCCGGAAGGAAGCAGCCAAGGCAGAUGACGCGUGUGCCG
GGAUGUAGCUGGCAGGG
>URS0000425B5A_316407 Escherichia coli str. K-12 substr. W3110 tRNA
UCCUCUGUAGUUCAGUCGGUAGAACGGCGGACUGUUAAUCCGUAUGUCACUGGUUCGAGUCCAGUCAGAGGAG
>URS0000AB7F7D_316385 Escherichia coli str. K-12 substr. DH10B Archaeal large subunit ribosomal RNA
AGGUUAAGCGACUAAGCGUACACGGUGGAUGCCCUGGCAGUCAGAGGCGAUGAAGGACGUGCUAAUCUGCGAUAAGCGUC
GGUAAGGUGAUAUGAACCGUUAUAACCGGCGAUUUCCGAAUGGGGAAACCCAGUGUGUUUCGACACACUAUCAUUAACUG
AAUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCC
CAGUAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCUGAAUCAGUAUGUGUGUUAGUGGAAGCGUCUGGAAAGGCGCGCG
AUACAGGGUGACAGCCCCGUACACAAAAAUGCACAUAUUGUGAGCUCGAUGAGUAGGGCGGGACACGUGGUAUCCUGUCU
GAAUAUGGGGGGACCAUCCUCCAAGGCUAAAUACUCCUGACUGACCGAUAGUGAACCAGUACCGUGAGGGAAAGGCGAAA
AGAACCCCGGCGAGGGGAGUGAAAAAGAACCUGAAACCGUGUACGUACAAGCAGUGGGAGCACGCUUAGGCGUGUGACUG
CGUACCUUUUGUAUAAUGGGUCAGCGACUUAUAUUCUGUAGCAAGGUUAACCGAAUAGGGGAGCCGAAGGGAAACCGAGU
CUUAACUGGGCGUUAAGUUGCAGGGUAUAGACCCGAAACCCGGUGAUCUAGCCAUGGGCAGGUUGAAGGUUGGGUAACAC
UAACUGGAGGACCGAACCGACUAAUGUUGAAAAAUUAGCGGAUGACUUGUGGCUGGGGGUGAAAGGCCAAUCAAACCGGG
AGAUAGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGUGAAUUCAUCUCCGGGGGUAGAGCACUGUUUCGGCAAG
GGGGUCAUCCCGACUUACCAACCCGAUGCAAACUGCGAAUACCGGAGAAUGUUAUCACGGGAGACACACGGCGGGUGCUA
ACGUCCGUCGUGAAGAGGGAAACAACCCAGACCGCCAGCUAAGGUCCCAAAGUCAUGGUUAAGUGGGAAACGAUGUGGGA
AGGCCCAGACAGCCAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCACUGGUCGAGUCGGCCU
GCGCGGAAGAUGUAACGGGGCUAAACCAUGCACCGAAGCUGCGGCAGCGACGCUUAUGCGUUGUUGGGUAGGGGAGCGUU
CUGUAAGCCUGCGAAGGUGUGCUGUGAGGCAUGCUGGAGGUAUCAGAAGUGCGAAUGCUGACAUAAGUAACGAUAAAGCG
GGUGAAAAGCCCGCUCGCCGGAAGACCAAGGGUUCCUGUCCAACGUUAAUCGGGGCAGGGUGAGUCGACCCCUAAGGCGA
GGCCGAAAGGCGUAGUCGAUGGGAAACAGGUUAAUAUUCCUGUACUUGGUGUUACUGCGAAGGGGGGACGGAGAAGGCUA
UGUUGGCCGGGCGACGGUUGUCCCGGUUUAAGCGUGUAGGCUGGUUUUCCAGGCAAAUCCGGAAAAUCAAGGCUGAGGCG
UGAUGACGAGGCACUACGGUGCUGAAGCAACAAAUGCCCUGCUUCCAGGAAAAGCCUCUAAGCAUCAGGUAACAUCAAAU
CGUACCCCAAACCGACACAGGUGGUCAGGUAGAGAAUACCAAGGCGCUUGAGAGAACUCGGGUGAAGGAACUAGGCAAAA
UGGUGCCGUAACUUCGGGAGAAGGCACGCUGAUAUGUAGGUGAAGCGACUUGCUCGUGGAGCUGAAAUCAGUCGAAGAUA
CCAGCUGGCUGCAACUGUUUAUUAAAAACACAGCACUGUGCAAACACGAAAGUGGACGUAUACGGUGUGACGCCUGCCCG
GUGCCGGAAGGUUAAUUGAUGGGGUCAGCGCAAGCGAAGCUCUUGAUCGAAGCCCCGGUAAACGGCGGCCGUAACUAUAA
CGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAUGGCGUAAUGAUGGCCAGGCUGUCUCCAC
CCGAGACUCAGUGAAAUUGAACUCGCUGUGAAGAUGCAGUGUACCCGCGGCAAGACGGAAAGACCCCGUGAACCUUUACU
AUAGCUUGACACUGAACAUUGAGCCUUGAUGUGUAGGAUAGGUGGGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGAG
CCGACCUUGAAAUACCACCCUUUAAUGUUUGAUGUUCUAACGUGGACCCGUGAUCCGGGUUGCGGACAGUGUCUGGUGGG
UAGUUUGACUGGGGCGGUCUCCUCCUAAAGAGUAACGGAGGAGCACGAAGGUUGGCUAAUCCUGGUCGGACAUCAGGAGG
UUAGUGCAAUGGCAUAAGCCAGCUUGACUGCGAGCGUGACGGCGCGAGCAGGUGCGAAAGCAGGUCAUAGUGAUCCGGUG
GUUCUGAAUGGAAGGGCCAUCGCUCAACGGAUAAAAGGUACUCCGGGGAUAACAGGCUGAUACCGCCCAAGAGUUCAUAU
CGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCACAUCCUGGAGCUGAAGUAGGUCCCAAGGGUAUGGCUGUUCGCC
AUUUAAAGUGGUACGCGAGCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCCGUGGGCGCUGGAGAACUGA
GGGGGGCUGCUCCUAGUACGAGAGGACCGGAGUGGACGCAUCACUGGUGUUCGGGUUGUCAUGCCAAUGGCACUGCCCGG
UAGCUAAAUGCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCACGAAACUUGCCCCGAGAUGAGUUCUCCCUGACUCCUUG
AGAGUCCUGAAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGCGCAGCGAUGCGUUGAGCUAACCGGUA
CUAAUGAACCGUGAGGCUUAACCU
>URS0000AB96DC_316385 Escherichia coli str. K-12 substr. DH10B Archaeal large subunit ribosomal RNA
AGGUUAAGCGACUAAGCGUACACGGUGGAUGCCCUGGCAGUCAGAGGCGAUGAAGGACGUGCUAAUCUGCGAUAAGCGUC
GGUAAGGUGAUAUGAACCGUUAUAACCGGCGAUUUCCGAAUGGGGAAACCCAGUGUGUUUCGACACACUAUCAUUAACUG
AAUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCC
CAGUAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCUGAAUCAGUGUGUGUGUUAGUGGAAGCGUCUGGAAAGGCGUGCG
AUACAGGGUGACAGCCCCGUACACAAAAAUGCACAUGCUGUGAGCUCGAUGAGUAGGGCGGGACACGUGGUAUCCUGUCU
GAAUAUGGGGGGACCAUCCUCCAAGGCUAAAUACUCCUGACUGACCGAUAGUGAACCAGUACCGUGAGGGAAAGGCGAAA
AGAACCCCGGCGAGGGGAGUGAAAAAGAACCUGAAACCGUGUACGUACAAGCAGUGGGAGCACGCUUAGGCGUGUGACUG
CGUACCUUUUGUAUAAUGGGUCAGCGACUUAUAUUCUGUAGCAAGGUUAACCGAAUAGGGGAGCCGAAGGGAAACCGAGU
CUUAACUGGGCGUUAAGUUGCAGGGUAUAGACCCGAAACCCGGUGAUCUAGCCAUGGGCAGGUUGAAGGUUGGGUAACAC
UAACUGGAGGACCGAACCGACUAAUGUUGAAAAAUUAGCGGAUGACUUGUGGCUGGGGGUGAAAGGCCAAUCAAACCGGG
AGAUAGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGUGAAUUCAUCUCCGGGGGUAGAGCACUGUUUCGGCAAG
GGGGUCAUCCCGACUUACCAACCCGAUGCAAACUGCGAAUACCGGAGAAUGUUAUCACGGGAGACACACGGCGGGUGCUA
ACGUCCGUCGUGAAGAGGGAAACAACCCAGACCGCCAGCUAAGGUCCCAAAGUCAUGGUUAAGUGGGAAACGAUGUGGGA
AGGCCCAGACAGCCAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCACUGGUCGAGUCGGCCU
GCGCGGAAGAUGUAACGGGGCUAAACCAUGCACCGAAGCUGCGGCAGCGACACUAUGUGUUGUUGGGUAGGGGAGCGUUC
UGUAAGCCUGUGAAGGUGUGCUGUGAGGCAUGCUGGAGGUAUCAGAAGUGCGAAUGCUGACAUAAGUAACGAUAAAGCGG
GUGAAAAGCCCGCUCGCCGGAAGACCAAGGGUUCCUGUCCAACGUUAAUCGGGGCAGGGUGAGUCGACCCCUAAGGCGAG
GCCGAAAGGCGUAGUCGAUGGGAAACAGGUUAAUAUUCCUGUACUUGGUGUUACUGCGAAGGGGGGACGGAGAAGGCUAU
GUUGGCCGGGCGACGGUUGUCCCGGUUUAAGCGUGUAGGCUGGUUUUCCAGGCAAAUCCGGAAAAUCAAGGCUGAGGCGU
GAUGACGAGGCACUACGGUGCUGAAGCAACAAAUGCCCUGCUUCCAGGAAAAGCCUCUAAGCAUCAGGUAACAUCAAAUC
GUACCCCAAACCGACACAGGUGGUCAGGUAGAGAAUACCAAGGCGCUUGAGAGAACUCGGGUGAAGGAACUAGGCAAAAU
GGUGCCGUAACUUCGGGAGAAGGCACGCUGAUAUGUAGGUGAAGCGACUUGCUCGUGGAGCUGAAAUCAGUCGAAGAUAC
CAGCUGGCUGCAACUGUUUAUUAAAAACACAGCACUGUGCAAACACGAAAGUGGACGUAUACGGUGUGACGCCUGCCCGG
UGCCGGAAGGUUAAUUGAUGGGGUUAGCCGCAAGGCGAAGCUCUUGAUCGAAGCCCCGGUAAACGGCGGCCGUAACUAUA
ACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAUGGCGUAAUGAUGGCCAGGCUGUCUCCA
CCCGAGACUCAGUGAAAUUGAACUCGCUGUGAAGAUGCAGUGUACCCGCGGCAAGACGGAAAGACCCCGUGAACCUUUAC
UAUAGCUUGACACUGAACAUUGAGCCUUGAUGUGUAGGAUAGGUGGGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGA
GCCGACCUUGAAAUACCACCCUUUAAUGUUUGAUGUUCUAACGUUGACCCGUAAUCCGGGUUGCGGACAGUGUCUGGUGG
GUAGUUUGACUGGGGCGGUCUCCUCCUAAAGAGUAACGGAGGAGCACGAAGGUUGGCUAAUCCUGGUCGGACAUCAGGAG
GUUAGUGCAAUGGCAUAAGCCAGCUUGACUGCGAGCGUGACGGCGCGAGCAGGUGCGAAAGCAGGUCAUAGUGAUCCGGU
GGUUCUGAAUGGAAGGGCCAUCGCUCAACGGAUAAAAGGUACUCCGGGGAUAACAGGCUGAUACCGCCCAAGAGUUCAUA
UCGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCACAUCCUGGGGCUGAAGUAGGUCCCAAGGGUAUGGCUGUUCGC
CAUUUAAAGUGGUACGCGAGCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCCGUGGGCGCUGGAGAACUG
AGGGGGGCUGCUCCUAGUACGAGAGGACCGGAGUGGACGCAUCACUGGUGUUCGGGUUGUCAUGCCAAUGGCACUGCCCG
GUAGCUAAAUGCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCACGAAACUUGCCCCGAGAUGAGUUCUCCCUGACUCCUU
GAGAGUCCUGAAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGCGCAGCGAUGCGUUGAGCUAACCGGU
ACUAAUGAACCGUGAGGCUUAACCU
>URS000015F9F0_316385 Escherichia coli str. K-12 substr. DH10B tRNA
AGGCUUGUAGCUCAGGUGGUUAGAGCGCACCCCUGAUAAGGGUGAGGUCGGUGGUUCAAGUCCACUCAGGCCUA
>URS000015F9F0_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
AGGCUUGUAGCUCAGGUGGUUAGAGCGCACCCCUGAUAAGGGUGAGGUCGGUGGUUCAAGUCCACUCAGGCCUA
>URS0000288828_879462 Escherichia coli str. K-12 substr. MG1655star 5S ribosomal RNA
CCUGGCGGCAGUAGCGCGGUGGUCCCACCUGACCCCAUGCCGAACUCAGAAGUGAAACGCCGUAGCGCCGAUGGUAGUGU
GGGGUCUCCCCAUGCGAGAGUAGGGAACUGCCAGGC
>URS0000288828_316385 Escherichia coli str. K-12 substr. DH10B 5S ribosomal RNA
CCUGGCGGCAGUAGCGCGGUGGUCCCACCUGACCCCAUGCCGAACUCAGAAGUGAAACGCCGUAGCGCCGAUGGUAGUGU
GGGGUCUCCCCAUGCGAGAGUAGGGAACUGCCAGGC
>URS00001F9150_879462 Escherichia coli str. K-12 substr. MG1655star tRNA
GCGCCCGUAGCUCAGCUGGAUAGAGCGCUGCCCUCCGGAGGCAGAGGUCUCAGGUUCGAAUCCUGUCGGGCGCG
>URS00001F9150_316385 Escherichia coli str. K-12 substr. DH10B tRNA
GCGCCCGUAGCUCAGCUGGAUAGAGCGCUGCCCUCCGGAGGCAGAGGUCUCAGGUUCGAAUCCUGUCGGGCGCG
>URS0000199749_83333 Escherichia coli K-12 sRNA antisense regulator destabilzes ptsG mRNA, Hfq-dependent; regulated by sgrR
GAUGAAGCAAGGGGGUGCCCCAUGCGUCAGUUUUAUCAGCACUAUUUUACCGCGACAGCGAAGUUGUGCUGGUUGCGUUG
GUUAAGCGUCCCACAACGAUUAACCAUGCUUGAAGGACUGAUGCAGUGGGAUGACCGCAAUUCUGAAAGUUGACUUGCCU
GCAUCAUGUGUGACUGAGUAUUGGUGUAAAAUCACCCGCCAGCAGAUUAUACCUGCUGGUUUUUUUU
>URS00008C6DCF_879462 Escherichia coli str. K-12 substr. MG1655star Bacterial large subunit ribosomal RNA
ACCAGCUGGCUGCAACUGUUUAUUAAAAACACAGCACUGUGCAAACACGAAAGUGGACGUAUACGGUGUGACGCCUGCCC
GGUGCCGGAAGGUUAAUUGAUGGGGUCAGCGCAAGCGAAGCUCUUGAUCGAAGCCCCGGUAAACGGCGGCCGUAACUAUA
ACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAUGGCGUAAUGAUGGCCAGGCUGUCUCCA
CCCGAGACUCAGUGAAAUUGAACUCGCUGUGAAGAUGCAGUGUACCCGCGGCAAGACGGAAAGACCCCGUGAACCUUUAC
UAUAGCUUGACACUGAACAUUGAGCCUUGAUGUGUAGGAUAGGUGGGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGA
GCCGACCUUGAAAUACCACCCUUUAAUGUUUGAUGUUCUAACGUGGACCCGUGAUCCGGGUUGCGGACAGUGUCUGGUGG
GUAGUUUGACUGGGGCGGUCUCCUCCUAAAGAGUAACGGAGGAGCACGAAGGUUGGCUAAUCCUGGUCGGACAUCAGGAG
GUUAGUGCAAUGGCAUAAGCCAGCUUGACUGCGAGCGUGACGGCGCGAGCAGGUGCGAAAGCAGGUCAUAGUGAUCCGGU
GGUUCUGAAUGGAAGGGCCAUCGCUCAACGGAUAAAAGGUACUCCGGGGAUAACAGGCUGAUACCGCCCAAGAGUUCAUA
UCGACGGCGGUGUUUGGCACCUCGAUGUCGGCUCAUCACAUCCUGGAGCUGAAGUAGGUCCCAAGGGUAUGGCUGUUCGC
CAUUUAAAGUGGUACGCGAGCUGGGUUUAGAACGUCGUGAGACAGUUCGGUCCCUAUCUGCCGUGGGCGCUGGAGAACUG
AGGGGGGCUGCUCCUAGUACGAGAGGACCGGAGUGGACGCAUCACUGGUGUUCGGGUUGUCAUGCCAAUGGCACUGCCCG
GUAGCUAAAUGCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCACGAAACUUGCCCCGAGAUGAGUUCUCCCUGACUCCUU
GAGAGUCCUGAAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGCGCAGCGAUGCGUUGAGCUAACCGGU
ACUAAUGAACCGUGAGGCUUAACCUU
>URS000049EAA4_83333 Escherichia coli K-12 sRNA antisense regulator of shoB toxin
GUUGAGGGUGCAUGCUGCACAAAAUUAAAGUUAAAAAGUAAAACCCCCGUUCCUUACCAGUUCGGGGGUUUUACUUU
>URS000039A860_316407 Escherichia coli str. K-12 substr. W3110 antisense sRNA RprA
ACGGUUAUAAAUCAACAUAUUGAUUUAUAAGCAUGGAAAUCCCCUGAGUGAAACAACGAAUUGCUGUGUGUAGUCUUUGC
CCAUCUCCCACGAUGGGCUUUUUUUUAA
>URS00005CE4AE_316407 Escherichia coli str. K-12 substr. W3110 rdlD antitoxin
GUCUGGUUUCAAGAUUAGCCCCCGUUCUGUUGUCAGGUUUUACCUCUCAACGUGCGGGGGUUUUCU
>URS000002D309_316407 Escherichia coli str. K-12 substr. W3110 5S ribosomal RNA
CCUGGCGGCAGUAGCGCGGUGGUCCCACCUGACCCCAUGCCGAACUCAGAAGUGAAACGCCGUAGCGCCGAUGGUAGUGU
GGGGUCUCCUCAUGCGAGAGUAGGGAACUGCCAGGC
>URS0000237957_316385 Escherichia coli str. K-12 substr. DH10B regulatory anti-sense RNA
AACACAUCAGAUUUCCUGGUGUAACGAAUUUUUUAAGUGCUUCUUGCUUAAGCAAGUUUCAUCCCGACCCCCUCAGGGUC
GGGAUUU
>URS000030BE1E_316407 Escherichia coli str. K-12 substr. W3110 5S ribosomal RNA
UCUGGCGGCAGUAGCGCGGUGGUCCCACCUGACCCCAUGCCGAACUCAGAAGUGAAACGCCGUAGCGCCGAUGGUAGUGU
GGGGUCUCCCCAUGCGAGAGUAGGGAACUGCCAGAC
>URS0000288828_316407 Escherichia coli str. K-12 substr. W3110 5S ribosomal RNA
CCUGGCGGCAGUAGCGCGGUGGUCCCACCUGACCCCAUGCCGAACUCAGAAGUGAAACGCCGUAGCGCCGAUGGUAGUGU
GGGGUCUCCCCAUGCGAGAGUAGGGAACUGCCAGGC
>URS00005CE4AE_316385 Escherichia coli str. K-12 substr. DH10B rdlD antitoxin
GUCUGGUUUCAAGAUUAGCCCCCGUUCUGUUGUCAGGUUUUACCUCUCAACGUGCGGGGGUUUUCU
>URS00003DC4B1_316407 Escherichia coli str. K-12 substr. W3110 5S ribosomal RNA
CCUGGCGGCCGUAGCGCGGUGGUCCCACCUGACCCCAUGCCGAACUCAGAAGUGAAACGCCGUAGCGCCGAUGGUAGUGU
GGGGUCUCCCCAUGCGAGAGUAGGGAACUGCCAGGC
>URS00005833D6_316407 Escherichia coli str. K-12 substr. W3110 Bacterial small signal recognition particle RNA
UGUUGGUUCUCCCGCAACGCUACUCUGUUUACCAGGUCAGGUCCGGAAGGAAGCAGCCAAGGCAGAUGACGCGUGUGCCG
GGAUGUAGCUGGCAGGG
>URS00004BB8BB_316385 Escherichia coli str. K-12 substr. DH10B Bacterial RNase P class A
GAAGCUGACCAGACAGUCGCCGCUUCGUCGUCGUCCUCUUCGGGGGAGACGGGCGGAGGGGAGGAAAGUCCGGGCUCCAU
AGGGCAGGGUGCCAGGUAACGCCUGGGGGGGAAACCCACGACCAGUGCAACAGAGAGCAAACCGCCGAUGGCCCGCGCAA
GCGGGAUCAGGUAAGGGUGAAAGGGUGCGGUAAGAGCGCACCGCGCGGCUGGUAACAGUCCGUGGCACGGUAAACUCCAC
CCGGAGCAAGGCCAAAUAGGGGUUCAUAAGGUACGGCCCGUACUGAACCCGGGUAGGCUGCUUGAGCCAGUGAGCGAUUG
CUGGCCUAGAUGAAUGACUGUCCACGACAGAACCCGGCUUAUCGGUCAGUUUCACCU
>URS00004BB8BB_83333 Escherichia coli K-12 Bacterial RNase P class A
GAAGCUGACCAGACAGUCGCCGCUUCGUCGUCGUCCUCUUCGGGGGAGACGGGCGGAGGGGAGGAAAGUCCGGGCUCCAU
AGGGCAGGGUGCCAGGUAACGCCUGGGGGGGAAACCCACGACCAGUGCAACAGAGAGCAAACCGCCGAUGGCCCGCGCAA
GCGGGAUCAGGUAAGGGUGAAAGGGUGCGGUAAGAGCGCACCGCGCGGCUGGUAACAGUCCGUGGCACGGUAAACUCCAC
CCGGAGCAAGGCCAAAUAGGGGUUCAUAAGGUACGGCCCGUACUGAACCCGGGUAGGCUGCUUGAGCCAGUGAGCGAUUG
CUGGCCUAGAUGAAUGACUGUCCACGACAGAACCCGGCUUAUCGGUCAGUUUCACCU
>URS00004BB8BB_316407 Escherichia coli str. K-12 substr. W3110 Bacterial RNase P class A
GAAGCUGACCAGACAGUCGCCGCUUCGUCGUCGUCCUCUUCGGGGGAGACGGGCGGAGGGGAGGAAAGUCCGGGCUCCAU
AGGGCAGGGUGCCAGGUAACGCCUGGGGGGGAAACCCACGACCAGUGCAACAGAGAGCAAACCGCCGAUGGCCCGCGCAA
GCGGGAUCAGGUAAGGGUGAAAGGGUGCGGUAAGAGCGCACCGCGCGGCUGGUAACAGUCCGUGGCACGGUAAACUCCAC
CCGGAGCAAGGCCAAAUAGGGGUUCAUAAGGUACGGCCCGUACUGAACCCGGGUAGGCUGCUUGAGCCAGUGAGCGAUUG
CUGGCCUAGAUGAAUGACUGUCCACGACAGAACCCGGCUUAUCGGUCAGUUUCACCU
>URS000037602E_879462 Escherichia coli str. K-12 substr. MG1655star transfer-messenger RNA
GGGGCUGAUUCUGGAUUCGACGGGAUUUGCGAAACCCAAGGUGCAUGCCGAGGGGCGGUUGGCCUCGUAAAAAGCCGCAA
AAAAUAGUCGCAAACGACGAAAACUACGCUUUAGCAGCUUAAUAACCUGCUUAGAGCCCUCUCUCCCUAGCCUCCGCUCU
UAGGACGGGGAUCAAGAGAGGUCAAACCCAAAAGAGAUCGCGUGGAAGCCCUGCCUGGGGUUGAAGCGUUAAAACUUAAU
CAGGCUAGUUUGUUAGUGGCGUGUCCGUCCGCAGCUGGCAAGCGAAUGUAAAGACUGACUAAGCAUGUAGUACCGAGGAU
GUAGGAAUUUCGGACGCGGGUUCAACUCCCGCCAGCUCCACCA
>URS0000336B43_316407 Escherichia coli str. K-12 substr. W3110 Bacterial small subunit ribosomal RNA
AAAUUGAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAAC
AGCUUGCUGUUUCGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCUGAUGGAGGGGGAUAACUACUGGA
AACGGUAGCUAAUACCGCAUAACGUCGCAAGACCAAAGAGGGGGACCCUCGGGCCUCUUGCCAUCGGAUGUGCCCAGAUG
GGAUUAGCUUGUUGGUGGGGUAACGGCUCACCAAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGA
ACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGC
CGCGUGUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUU
GACGUUACCCGCAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAA
UUACUGGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCCGGGCUCAACCUGGGAACUGCAUCUGA
UACUGGCAAGCUUGAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACC
GGUGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGG
UAGUCCACGCCGUAAACGAUGUCGACUUGGAGGUUGUGCCCUUGAGGCGUGGCUUCCGGAGCUAACGCGUUAAGUCGACC
GCCUGGGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAU
UCGAUGCAACGCGAAGAACCUUACCUGGUCUUGACAUCCACGGAAGUUUUCAGAGAUGAGAAUGUGCCUUCGGGAACCGU
GAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCC
UUUGUUGCCAGCGGUCCGGCCGGGAACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGGGGAUGACGUCAAGUC
AUCAUGGCCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGA
CCUCAUAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCA
GAAUGCCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGU
AGCUUAACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUAACAAGGUAACCGUAGGGGAAC
CUGCGGUUGGAUCACCUCCUUA
>URS000037602E_316407 Escherichia coli str. K-12 substr. W3110 transfer-messenger RNA
GGGGCUGAUUCUGGAUUCGACGGGAUUUGCGAAACCCAAGGUGCAUGCCGAGGGGCGGUUGGCCUCGUAAAAAGCCGCAA
AAAAUAGUCGCAAACGACGAAAACUACGCUUUAGCAGCUUAAUAACCUGCUUAGAGCCCUCUCUCCCUAGCCUCCGCUCU
UAGGACGGGGAUCAAGAGAGGUCAAACCCAAAAGAGAUCGCGUGGAAGCCCUGCCUGGGGUUGAAGCGUUAAAACUUAAU
CAGGCUAGUUUGUUAGUGGCGUGUCCGUCCGCAGCUGGCAAGCGAAUGUAAAGACUGACUAAGCAUGUAGUACCGAGGAU
GUAGGAAUUUCGGACGCGGGUUCAACUCCCGCCAGCUCCACCA
>URS00000ABFE9_316385 Escherichia coli str. K-12 substr. DH10B Bacterial small subunit ribosomal RNA
AAAUUGAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAGA
AGCUUGCUUCUUUGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCUGAUGGAGGGGGAUAACUACUGGA
AACGGUAGCUAAUACCGCAUAACGUCGCAAGACCAAAGAGGGGGACCUUCGGGCCUCUUGCCAUCGGAUGUGCCCAGAUG
GGAUUAGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGA
ACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGC
CGCGUGUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUU
GACGUUACCCGCAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAA
UUACUGGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCCGGGCUCAACCUGGGAACUGCAUCUGA
UACUGGCAAGCUUGAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACC
GGUGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGG
UAGUCCACGCCGUAAACGAUGUCGACUUGGAGGUUGUGCCCUUGAGGCGUGGCUUCCGGAGCUAACGCGUUAAGUCGACC
GCCUGGGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAU
UCGAUGCAACGCGAAGAACCUUACCUGGUCUUGACAUCCACGGAAGUUUUCAGAGAUGAGAAUGUGCCUUCGGGAACCGU
GAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCC
UUUGUUGCCAGCGGUCCGGCCGGGAACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGGGGAUGACGUCAAGUC
AUCAUGGCCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGA
CCUCAUAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCA
GAAUGCCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGU
AGCUUAACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUAACAAGGUAACCGUAGGGGAAC
CUGCGGUUGGAUCACCUCCUUA
>URS00005A30CB_316385 Escherichia coli str. K-12 substr. DH10B Selenocysteine transfer RNA
GGAAGAUCGUCGUCUCCGGUGAGGCGGCUGGACUUCAAAUCCAGUUGGGGCCGCCAGCGGUCCCGGGCAGGUUCGACUCC
UGUGAUCUUCC
>URS00000D4AD4_316385 Escherichia coli str. K-12 substr. DH10B Bacterial small subunit ribosomal RNA
AAAUUGAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAGA
AGCUUGCUUCUUUGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCUGAUGGAGGGGGAUAACUACUGGA
AACGGUAGCUAAUACCGCAUAACGUCGCAAGACCAAAGAGGGGGACCUUCGGGCCUCUUGCCAUCGGAUGUGCCCAGAUG
GGAUUAGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGA
ACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGC
CGCGUGUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUU
GACGUUACCCGCAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAA
UUACUGGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCCGGGCUCAACCUGGGAACUGCAUCUGA
UACUGGCAAGCUUGAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACC
GGUGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGG
UAGUCCACGCCGUAAACGAUGUCGACUUGGAGGUUGUGCCCUUGAGGCGUGGCUUCCGGAGCUAACGCGUUAAGUCGACC
GCCUGGGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAU
UCGAUGCAACGCGAAGAACCUUACCUGGUCUUGACAUCCACGGAAGUUUUCAGAGAUGAGAAUGUGCCUUCGGGAACCGU
GAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCC
UUUGUUGCCAGCGGUCCGGCCGGGAACUCAAAGGAGACUGUUAGUGAUAAACUGGAGGAAGGUGGGGAUGACGUCAAGUC
AUCAUGGCCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGA
CCUCAUAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCA
GAAUGCCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGU
AGCUUAACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUAACAAGGUAACCGUAGGGGAAC
CUGCGGUUGGAUCACCUCCUUA
>URS000037602E_316385 Escherichia coli str. K-12 substr. DH10B transfer-messenger RNA
GGGGCUGAUUCUGGAUUCGACGGGAUUUGCGAAACCCAAGGUGCAUGCCGAGGGGCGGUUGGCCUCGUAAAAAGCCGCAA
AAAAUAGUCGCAAACGACGAAAACUACGCUUUAGCAGCUUAAUAACCUGCUUAGAGCCCUCUCUCCCUAGCCUCCGCUCU
UAGGACGGGGAUCAAGAGAGGUCAAACCCAAAAGAGAUCGCGUGGAAGCCCUGCCUGGGGUUGAAGCGUUAAAACUUAAU
CAGGCUAGUUUGUUAGUGGCGUGUCCGUCCGCAGCUGGCAAGCGAAUGUAAAGACUGACUAAGCAUGUAGUACCGAGGAU
GUAGGAAUUUCGGACGCGGGUUCAACUCCCGCCAGCUCCACCA
>URS0000040F2C_316407 Escherichia coli str. K-12 substr. W3110 Bacterial small subunit ribosomal RNA
AAAUUGAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAGA
AGCUUGCUUCUUUGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCUGAUGGAGGGGGAUAACUACUGGA
AACGGUAGCUAAUACCGCAUAACGUCGCAAGACCAAAGAGGGGGACCUUCGGGCCUCUUGCCAUCGGAUGUGCCCAGAUG
GGAUUAGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGA
ACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGC
CGCGUGUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUU
GACGUUACCCGCAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAA
UUACUGGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCCGGGCUCAACCUGGGAACUGCAUCUGA
UACUGGCAAGCUUGAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACC
GGUGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGG
UAGUCCACGCCGUAAACGAUGUCGACUUGGAGGUUGUGCCCUUGAGGCGUGGCUUCCGGAGCUAACGCGUUAAGUCGACC
GCCUGGGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAU
UCGAUGCAACGCGAAGAACCUUACCUGGUCUUGACAUCCACAGAACUUUCCAGAGAUGGAUUGGUGCCUUCGGGAACUGU
GAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCU
UUUGUUGCCAGCGGUCCGGCCGGGAACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGGGGAUGACGUCAAGUC
AUCAUGGCCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGA
CCUCAUAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCA
GAAUGCCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGU
AGCUUAACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUAACAAGGUAACCGUAGGGGAAC
CUGCGGUUGGAUCACCUCCUUA
>URS00003FD2D5_316385 Escherichia coli str. K-12 substr. DH10B Bacterial small subunit ribosomal RNA
AAAUUGAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAGA
AGCUUGCUUCUUUGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCUGAUGGAGGGGGAUAACUACUGGA
AACGGUAGCUAAUACCGCAUAACGUCGCAAAACCAAAGAGGGGGACCUUCGGGCCUCUUGCCAUCGGAUGUGCCCAGAUG
GGAUUAGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGA
ACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGC
CGCGUGUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUU
GACGUUACCCGCAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAA
UUACUGGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCCGGGCUCAACCUGGGAACUGCAUCUGA
UACUGGCAAGCUUGAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACC
GGUGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGG
UAGUCCACGCCGUAAACGAUGUCGACUUGGAGGUUGUGCCCUUGAGGCGUGGCUUCCGGAGCUAACGCGUUAAGUCGACC
GCCUGGGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAU
UCGAUGCAACGCGAAGAACCUUACCUGGUCUUGACAUCCACGGAAGUUUUCAGAGAUGAGAAUGUGCCUUCGGGAACCGU
GAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCC
UUUGUUGCCAGCGGUCCGGCCGGGAACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGGGGAUGACGUCAAGUC
AUCAUGGCCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGA
CCUCAUAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCA
GAAUGCCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGU
AGCUUAACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUAACAAGGUAACCGUAGGGGAAC
CUGCGGUUGGAUCACCUCCUUA
>URS00004DD3DC_316385 Escherichia coli str. K-12 substr. DH10B Bacterial small subunit ribosomal RNA
AAAUUGAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAAC
AGCUUGCUGUUUCGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCUGAUGGAGGGGGAUAACUACUGGA
AACGGUAGCUAAUACCGCAUAACGUCGCAAGACCAAAGAGGGGGACCUUCGGGCCUCUUGCCAUCAGAUGUGCCCAGAUG
GGAUUAGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGA
ACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGC
CGCGUGUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUU
GACGUUACCCGCAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAA
UUACUGGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCCGGGCUCAACCUGGGAACUGCAUCUGA
UACUGGCAAGCUUGAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACC
GGUGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGG
UAGUCCACGCCGUAAACGAUGUCGACUUGGAGGUUGUGCCCUUGAGGCGUGGCUUCCGGAGCUAACGCGUUAAGUCGACC
GCCUGGGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAU
UCGAUGCAACGCGAAGAACCUUACCUGGUCUUGACAUCCACGGAAGUUUUCAGAGAUGAGAAUGUGCCUUCGGGAACCGU
GAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCC
UUUGUUGCCAGCGGUCCGGCCGGGAACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGGGGAUGACGUCAAGUC
AUCAUGGCCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGA
CCUCAUAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCA
GAAUGCCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGU
AGCUUAACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUAACAAGGUAACCGUAGGGGAAC
CUGCGGUUGGAUCACCUCCUUA
>URS0000040F2C_316385 Escherichia coli str. K-12 substr. DH10B Bacterial small subunit ribosomal RNA
AAAUUGAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAGA
AGCUUGCUUCUUUGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCUGAUGGAGGGGGAUAACUACUGGA
AACGGUAGCUAAUACCGCAUAACGUCGCAAGACCAAAGAGGGGGACCUUCGGGCCUCUUGCCAUCGGAUGUGCCCAGAUG
GGAUUAGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGA
ACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGC
CGCGUGUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUU
GACGUUACCCGCAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAA
UUACUGGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCCGGGCUCAACCUGGGAACUGCAUCUGA
UACUGGCAAGCUUGAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACC
GGUGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGG
UAGUCCACGCCGUAAACGAUGUCGACUUGGAGGUUGUGCCCUUGAGGCGUGGCUUCCGGAGCUAACGCGUUAAGUCGACC
GCCUGGGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAU
UCGAUGCAACGCGAAGAACCUUACCUGGUCUUGACAUCCACAGAACUUUCCAGAGAUGGAUUGGUGCCUUCGGGAACUGU
GAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCU
UUUGUUGCCAGCGGUCCGGCCGGGAACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGGGGAUGACGUCAAGUC
AUCAUGGCCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGA
CCUCAUAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCA
GAAUGCCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGU
AGCUUAACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUAACAAGGUAACCGUAGGGGAAC
CUGCGGUUGGAUCACCUCCUUA
>URS0000AB32EF_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGACGGAUAAGGCGUUCACGCCGCAUCCGGCAUUCAGUGCCUGAUGCGACGCUGACGCGUCUUAUCAGGCC
>URS0000AB43B1_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAACAGGAGCCAAAUGCCGGAUGCAACGCUGGCGCGUUUUAUCCGGCC
>URS0000AB43B1_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAACAGGAGCCAAAUGCCGGAUGCAACGCUGGCGCGUUUUAUCCGGCC
>URS0000AB47A3_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGACGCAUAGCGUCGCAUCCGACAACCGAUGCCUGAUGCGCCGCUGACGCGACUUAUCAGGCC
>URS0000AB582B_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GACCGGAAACGGUGUUCACGCCGCAUCCGGCAUUCGGUGCUCAAUGCCUGAUGCGACGCUUACCGCGUCUUAUCAGGCC
>URS0000AB7608_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAGUCGUGCGCAGAUGCCUGAUGCGACGCUAACGCGUCUUAUCAGACC
>URS0000AB86A5_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGUGCUUGCACCGCAUCCGGCAUCAACGCCUGCACAUUGUCGGAUGCGACGCCGGGGCGUCUUAUCCGAC
C
>URS0000ABB289_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAACCGAUGCCUGAUGCGACGCGGUCGCGUCUUAUCAGGCC
>URS0000ABC57C_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAGUCGGCGCAUAAUGCCUGAUGCGACGCUUGUCGCGUCUUAUCAUGCC
>URS0000133A43_879462 Escherichia coli str. K-12 substr. MG1655star Fumarate/nitrate reductase regulator sRNA
GCAGGUGAAUGCAACGUCAAGCGAUGGGCGUUGCGCUCCAUAUUGUCUUACUUCCUUUUUUGAAUUACUGCAUAGCACAA
UUGAUUCGUACGACGCCGACUUUGAUGAGUCGGCUUUU
>URS0000AB274A_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGCAAGCGCCGCAUCCGACAAGCGAUGCCUGAUGUGACGUUUAACGUGUCUUAUCAGGCC
>URS0000AB44D4_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUCCCCGCCGCAUCCGGCACAGGCACCGUGCUGAUGUCUGAUGCGACGCUGGCGCGUCUUAUCAGAC
C
>URS0000AB4E0F_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCUGAUAAGACGCGUAAGCGUCGCAUCAGGCAAUGGUGCUCGGAUGCCGGAUGCGGCGUAAACGCCUUAUCCGGCC
>URS0000AB4E0F_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCUGAUAAGACGCGUAAGCGUCGCAUCAGGCAAUGGUGCUCGGAUGCCGGAUGCGGCGUAAACGCCUUAUCCGGCC
>URS0000AB4F6F_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUCCACGCCGCAUCCGGCAGUGGUGGCAAAUGCCUGAUGCGCUACGCUUAUCAGGCC
>URS0000AB5276_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAAUCGUGCACAAUGCCUGAUGCGACGCUGCCGCGUCUUAUCAGGCC
>URS000015AD28_316385 Escherichia coli str. K-12 substr. DH10B Enterobacterial sRNA STnc450
CGCUAUACUAGCCACUGAAAAUGCCGGUUCACUUUCUUCGAAUCGGCUUUCAAUGUGU
>URS0000AB61FF_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGUUCACGCCGCAUCCGACAGCCGUUGCCUGAUGCGACGCGUAAUGCGUCUUAUCAGGCC
>URS0000AB6204_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCUGAUAAGACGCGUUAGCGUCGCAUCAGGCAUCUGCGCACGACUGCCGGAUGCGGCGUAAACGCCUUAUCCGGCC
>URS0000AB68F4_879462 Escherichia coli str. K-12 substr. MG1655star MicL sRNA
UAUGGCCGGAGCAGGAGUCCGUGCAGAAAACCUGCACCACUUCCUCGAUGCCGGAGUGCUGGAAGUCCAUAGCUCCGCGG
GAGCGUGGCAAGCCUCACCGAUGCGUUAUCGUAAUCAAGGAUUGUCCAUGUCAUCAGAUGAACACGCGGACGAGUAUUCG
CGUUAUAUCGUAGACGGGGCGGCGGUUGCUGAAAUGAAAGGAAUCAUUGAACGCCAUCAGGCCAAAUGAUUUUUACCGUU
GCAUCAUGUCGCCCAAUAUGAUGCUUGCUCGUACCAGGCCCCUGCAAUUUCAACAGGGGCCUUUUUUU
>URS0000AB68F4_316385 Escherichia coli str. K-12 substr. DH10B MicL sRNA
UAUGGCCGGAGCAGGAGUCCGUGCAGAAAACCUGCACCACUUCCUCGAUGCCGGAGUGCUGGAAGUCCAUAGCUCCGCGG
GAGCGUGGCAAGCCUCACCGAUGCGUUAUCGUAAUCAAGGAUUGUCCAUGUCAUCAGAUGAACACGCGGACGAGUAUUCG
CGUUAUAUCGUAGACGGGGCGGCGGUUGCUGAAAUGAAAGGAAUCAUUGAACGCCAUCAGGCCAAAUGAUUUUUACCGUU
GCAUCAUGUCGCCCAAUAUGAUGCUUGCUCGUACCAGGCCCCUGCAAUUUCAACAGGGGCCUUUUUUU
>URS0000AB91E6_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
AGCAGGAUGCGGCGUUGACCCCGCAUCCGGCAAUCAACGUCUGAUGCGACGCUUGCGCGUCUUAUCAGACC
>URS0000AB91F4_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGAAUAAGGCGUUCACGCCGCAUCCGGCAAUCAACGCCUGAUGCGACGCUUGCGCGUCUUAUCAGGCC
>URS0000ABA331_879462 Escherichia coli str. K-12 substr. MG1655star antisense RNA of dnaA mRNA
UUUGGCAUUCGGCUUGCGCGCCAUAAUGCCGUUACCCACCGCAUGCAGCAGGUGAGUUUUACCCAGACCCGUGCCGCCAU
A
>URS0000ABAC3B_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGUUUACGCCGCAUCCGGCAGCCGUUGCCUGAUGCGACGCUGUGCGUCUUAUCAGGCC
>URS00002B6EFE_316385 Escherichia coli str. K-12 substr. DH10B Short Intergenic Abundant RNA
UUGACGCUGUUGUUUUUUCAACCUAGAGUAAAGGAACAAGGGUAAGGGAGGAUUUCUCCCCCCUCUGAUGAGUUGUUAGU
AAGUCGGGAAACUUAACAGUAACAACACAACCAGUAUGAUGACGAGCUUCAUCAUAACCCUUUCCUUAUA
>URS0000ABB289_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAACCGAUGCCUGAUGCGACGCGGUCGCGUCUUAUCAGGCC
>URS0000A5F9D7_879462 Escherichia coli str. K-12 substr. MG1655star Moco (molybdenum cofactor) riboswitch
AUAACCACUAAACACUCUAGCCUCUGCACCUGGGUCAACUGAUACGGUGCUUUGGCCGUGACAAUGCUCGUAAAGAUUGC
CACCAGGGCGAAGGAAGAAAUGACUUCGCCUCCCGUAUCUGGAAAGGUGUACAUGGCUUCACAAC
>URS0000ABB3EF_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAGUUGGCGCACAAUGCCUGAUGCGACGCUUGUCGCGUCUUAUCAUGCC
>URS0000ABB3EF_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAGUUGGCGCACAAUGCCUGAUGCGACGCUUGUCGCGUCUUAUCAUGCC
>URS0000ABB848_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCUGAUAAGACGGGUAAGCGUCGCAUCAGGCAAUGGUGCUCGGAUGCCGGAUGCGGCGUGAACGCCUUAUCCGGCC
>URS0000ABB901_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAAUCGGUGCACGAUGCCUGAUGCGACGCUUGCGCGUCUUAUCAUGCC
>URS0000ABB901_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAAUCGGUGCACGAUGCCUGAUGCGACGCUUGCGCGUCUUAUCAUGCC
>URS0000ABCB74_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUAUGCCGCAUCCGGCAGUUAUGCGCAGAUGCCUGAUGCGACGCUGGCGCGUCUUAUCAUGCC
>URS0000ABCB74_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUAUGCCGCAUCCGGCAGUUAUGCGCAGAUGCCUGAUGCGACGCUGGCGCGUCUUAUCAUGCC
>URS00001315A5_879462 Escherichia coli str. K-12 substr. MG1655star RydC RNA
CUUCCGAUGUAGACCCGUAUUCUUCGCCUGUACCACGGGUCGGUUUUAGUACAGGCGUUUUCUU
>URS0000225C84_316385 Escherichia coli str. K-12 substr. DH10B IS061 RNA
GCGGCUAUCUGCAAAGUUAAAACUGCAUAAAAAAAUAGAGUCUGUCGACAUCCGCCAGACUCUACAGUACACACAGCAGU
GCAUCCGCGUCUUAAAUCCGGCAUUGUCUCCUCUGCGCCGGUGACUGUGUUAUAACGGUUUUAACCUUUAGUUGCCAAUU
UUCUUCAGUGACAGAUUUCA
>URS0000ABD328_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGUCAGACAAGGCGGUCACGCCGCAUCCGACAUCCAACGCCCGAGCCGGUUGCCUGAUGCGACGCUGGCGCGUCUUAUCA
GGCC
>URS0000ABD328_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGUCAGACAAGGCGGUCACGCCGCAUCCGACAUCCAACGCCCGAGCCGGUUGCCUGAUGCGACGCUGGCGCGUCUUAUCA
GGCC
>URS0000AB4BD4_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAGUCGUGCGCAGAUGCCUGAUGCGACGCUAACGCGUCUUAUCAGGCC
>URS0000AB4BD4_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAGUCGUGCGCAGAUGCCUGAUGCGACGCUAACGCGUCUUAUCAGGCC
>URS0000AB582B_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GACCGGAAACGGUGUUCACGCCGCAUCCGGCAUUCGGUGCUCAAUGCCUGAUGCGACGCUUACCGCGUCUUAUCAGGCC
>URS0000AB68F4_316407 Escherichia coli str. K-12 substr. W3110 MicL sRNA
UAUGGCCGGAGCAGGAGUCCGUGCAGAAAACCUGCACCACUUCCUCGAUGCCGGAGUGCUGGAAGUCCAUAGCUCCGCGG
GAGCGUGGCAAGCCUCACCGAUGCGUUAUCGUAAUCAAGGAUUGUCCAUGUCAUCAGAUGAACACGCGGACGAGUAUUCG
CGUUAUAUCGUAGACGGGGCGGCGGUUGCUGAAAUGAAAGGAAUCAUUGAACGCCAUCAGGCCAAAUGAUUUUUACCGUU
GCAUCAUGUCGCCCAAUAUGAUGCUUGCUCGUACCAGGCCCCUGCAAUUUCAACAGGGGCCUUUUUUU
>URS0000AB702B_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGGCGGAUAAGGCGUUUUUGCCGCAUCCGCCGUUCUGUGCACAAUGCCUGAUGCGACGCUGGCGCGUCUUAUCAUGCC
>URS0000AB7F4B_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCACUGGUUGCCUGAUGCGACGCUUGCGCGUCUUAUCAGGCC
>URS0000AB7F4B_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCACUGGUUGCCUGAUGCGACGCUUGCGCGUCUUAUCAGGCC
>URS0000AB86A5_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGUGCUUGCACCGCAUCCGGCAUCAACGCCUGCACAUUGUCGGAUGCGACGCCGGGGCGUCUUAUCCGAC
C
>URS0000AB86A5_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGUGCUUGCACCGCAUCCGGCAUCAACGCCUGCACAUUGUCGGAUGCGACGCCGGGGCGUCUUAUCCGAC
C
>URS0000AB948F_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGACGCAUCCGGCAUUAGGUGCUCAAUGCCUGAUGCGCUACGCUUAUCAGGCC
>URS0000AB98DB_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUUCGGCAACCAACGCCUGAUGCGACGCUUGCGCGUCUUAUCAGGCC
>URS0000ABAD4F_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCAGGCAUCUGAGCAUGAUGCCUGAUGCGGCGCUGGUCGCGUCUUAUCAGGCC
>URS0000ABAD4F_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCAGGCAUCUGAGCAUGAUGCCUGAUGCGGCGCUGGUCGCGUCUUAUCAGGCC
>URS0000ABB645_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGGCGGAUAAGGCGUCCACGCCGCAUCCGCCAGUGGCGCGGUGCAGAUGCCGGAUGCGACGCUUGUCGCGUCUUAUCCGA
CC
>URS0000ABB7E7_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGACGGAUAAGGCGUUUACGCUGCAUCCGGCAACCUAUGCCUGAUGCGACGCUGAAGCGUCUUAUCAUGCC
>URS000016FBD9_879462 Escherichia coli str. K-12 substr. MG1655star SraC/RyeA RNA
AGAUAAAAAGAGACCGAACACGAUUCCUGUAUUCGGUCCAGGGAAAUGGCUCUUGGGAGAGAGCCGUGCGCUAAAAGUUG
GCAUUAAUGCAGGCUUAGUUGCCUUGCCCUUUAAGAAUAGAUGACGACGCCAGGUUUUCCAGUUU
>URS000061AD0F_316407 Escherichia coli str. K-12 substr. W3110 C0299 RNA
GCCACGUGAGCACAAGAUAAGAGAACGAAAAAUCAGCAGCCUAUGCAGCGACAAAUAUUGAUAGCCUGAAUCAGUAUUG
>URS000061AD0F_879462 Escherichia coli str. K-12 substr. MG1655star C0299 RNA
GCCACGUGAGCACAAGAUAAGAGAACGAAAAAUCAGCAGCCUAUGCAGCGACAAAUAUUGAUAGCCUGAAUCAGUAUUG
>URS000061AD0F_316385 Escherichia coli str. K-12 substr. DH10B C0299 RNA
GCCACGUGAGCACAAGAUAAGAGAACGAAAAAUCAGCAGCCUAUGCAGCGACAAAUAUUGAUAGCCUGAAUCAGUAUUG
>URS0000AB594D_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAAUUGGUGCAUGAUGCCUGAUGCGACGCUGGCGCGUCUUAUCAGGCC
>URS0000AB7608_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAGUCGUGCGCAGAUGCCUGAUGCGACGCUAACGCGUCUUAUCAGACC
>URS0000AB7ADF_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGUCAGAUAAGGCGUUUUCGCCGCAUCCGACAUUCGCACACGAUGCCUGAUGCGACGCUGGCGCGUCUUAUCAGGCC
>URS0000AB7ADF_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGUCAGAUAAGGCGUUUUCGCCGCAUCCGACAUUCGCACACGAUGCCUGAUGCGACGCUGGCGCGUCUUAUCAGGCC
>URS0000AB7ADF_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGUCAGAUAAGGCGUUUUCGCCGCAUCCGACAUUCGCACACGAUGCCUGAUGCGACGCUGGCGCGUCUUAUCAGGCC
>URS0000AB8A02_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAUUUGAGCAUAGUGCCUGAUGCGACGCUUGAUGCGUCUUAUCAGGCC
>URS0000AB9C6F_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCAGGAUAAGGCGUUUACGCCGCAUCCGGCAUUUGAGCAGGAUGCCUGAUGCGACGCUGAUAGCGUCUUAUCAGGCC
>URS0000AB9FFD_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGUUGGAUAAGGCGGUUACGCCGCAUCCAACAUCUAACGCCCGAGCCGGUUGCCUGAUGCGACGCUGGCGCGUCUUAUCA
GCA
>URS0000ABA5C5_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAUCCGAGCACCAUUGCCUGAUGCGACGCUUACGCGUCUUAUCAGGCC
>URS0000ABA5C5_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAUCCGAGCACCAUUGCCUGAUGCGACGCUUACGCGUCUUAUCAGGCC
>URS0000ABA5C5_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAUCCGAGCACCAUUGCCUGAUGCGACGCUUACGCGUCUUAUCAGGCC
>URS0000ABACB4_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGUUUACGCCGCAUCCGACAUCAACGCCUGAUGCGACGCUUGCCGCGUCUUAUCAGGCC
>URS0000ABB848_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCUGAUAAGACGGGUAAGCGUCGCAUCAGGCAAUGGUGCUCGGAUGCCGGAUGCGGCGUGAACGCCUUAUCCGGCC
>URS00009DFFAD_316407 Escherichia coli str. K-12 substr. W3110 Cobalamin riboswitch
CUGUAGCAUCCACUUGCCGGUCCUGUGAGUUAAUAGGGAAUCCAGUGCGAAUCUGGAGCUGACGCGCAGCGGUAAGGAAA
GGUGCGAUGAUUGCGUUAUGCGGACACUGCCAUUCGGUGGGAAGUCAUCAUCUCUUAGUAUCUUAGAUACCCCUCCAAGC
CCGAAGACCUGCCGGCCAACGUCGCAUCUGG
>URS00009DFFAD_879462 Escherichia coli str. K-12 substr. MG1655star Cobalamin riboswitch
CUGUAGCAUCCACUUGCCGGUCCUGUGAGUUAAUAGGGAAUCCAGUGCGAAUCUGGAGCUGACGCGCAGCGGUAAGGAAA
GGUGCGAUGAUUGCGUUAUGCGGACACUGCCAUUCGGUGGGAAGUCAUCAUCUCUUAGUAUCUUAGAUACCCCUCCAAGC
CCGAAGACCUGCCGGCCAACGUCGCAUCUGG
>URS0000265A50_316407 Escherichia coli str. K-12 substr. W3110 sraL Hfq binding RNA
AUCAACACCAACCGGAACCUCCACCACGUGCUCGAAUGAGGUGUGUUGACGUCGGGGGAAACCCUCCUGUGUACCAGCGG
GAUAGAGAGAAAGACAAAGACCGGAAAACAAACUAAAGCGCCCUUGUGGCGCUUUAGUUUU
>URS00001E53D4_316385 Escherichia coli str. K-12 substr. DH10B SraG RNA
CUUCUGCGCAUCCUCGCGACUAAUGACAACCCUAACCCAGCUCUAUGUGGGUAAAGCCUCUCAUUAGCCGCGCGAACCUC
UGCAACGGAAGAUCAUUCAUAGCAACAAUACAUUAGUUUCCAGUGAAUUGCUGCCGUCAGCUUGAAAAAAGGGGCCACUC
AGGCCCCCUUUU
>URS00006E02FD_316407 Escherichia coli str. K-12 substr. W3110 Enterobacterial sRNA STnc430
AAAAGCAAUUAAUCUGCGUAUUUUCCGAAAUAAACAACGAUUAAAAAUCUAUUUUAGGAUUAACCUCACGGUAUGAUUUC
CGUUAAAUUACAGACAAGGGGAUUUAUCUGAUAAAAAAAUGCCGACAUAACGUCGGCAUUGUUAUUAAGG
>URS000016FBD9_316407 Escherichia coli str. K-12 substr. W3110 SraC/RyeA RNA
AGAUAAAAAGAGACCGAACACGAUUCCUGUAUUCGGUCCAGGGAAAUGGCUCUUGGGAGAGAGCCGUGCGCUAAAAGUUG
GCAUUAAUGCAGGCUUAGUUGCCUUGCCCUUUAAGAAUAGAUGACGACGCCAGGUUUUCCAGUUU
>URS00001AA27A_316407 Escherichia coli str. K-12 substr. W3110 C0465 RNA
GGGAAACUUUAUUGCUGAUGCCACCCGCCGCGAAAUUGAAAUAAAAAACCCGAUGCGCAGAUCAUCGGGUUCAUUUCA
>URS00001AA27A_316385 Escherichia coli str. K-12 substr. DH10B C0465 RNA
GGGAAACUUUAUUGCUGAUGCCACCCGCCGCGAAAUUGAAAUAAAAAACCCGAUGCGCAGAUCAUCGGGUUCAUUUCA
>URS00001855A3_879462 Escherichia coli str. K-12 substr. MG1655star Lysine riboswitch
CAGGCCAGAAGAGGCGCGUUGCCCAAGUAACGGUGUUGGAGGAGCCAGUCCUGUGAUAACACCUGAGGGGGUGCAUCGCC
GAGGUGAUUGAACGGCUGGCCACGUUCAUCAUCGGCUACAGGGGCUGAAUCCCCUGGGUUGUCACCAGAAGCGUUCGCAG
UCGGGCGUUUCGCAAGUGGUGGAGCACUUCUGGGUGA
>URS00001E4194_316385 Escherichia coli str. K-12 substr. DH10B SdsR_RyeB RNA
AGGCAACUAAGCCUGCAUUAAUGCCAACUUUUAGCGCACGGCUCUCUCCCAAGAGCCAUUUCCCUGGACCGAAUACAGGA
AUCGUGUUCGGUCUCUUUUU
>URS000065742A_316385 Escherichia coli str. K-12 substr. DH10B MicC RNA
CGGGUUAUAUGCCUUUAUUGUCACAGAAUUUAUUUUCUGUUGGGCCAUUGCAUUGCCACUGAUUUUCCAACAUAUAAAAA
GACAAGCCCGAACAGUCGUCCGGGCUUUUUUUUUAGAAUUG
>URS000039E69D_316385 Escherichia coli str. K-12 substr. DH10B TPP riboswitch (THI element)
CCAAACGACUCGGGGUGCCCUUCUGCGUGAAGGCUGAGAAAUACCCGUAUCACCUGAUCUGGAUAAUGCCAGCGUAGGGA
AGUCACGGACCACCAGG
>URS00001855A3_316385 Escherichia coli str. K-12 substr. DH10B Lysine riboswitch
CAGGCCAGAAGAGGCGCGUUGCCCAAGUAACGGUGUUGGAGGAGCCAGUCCUGUGAUAACACCUGAGGGGGUGCAUCGCC
GAGGUGAUUGAACGGCUGGCCACGUUCAUCAUCGGCUACAGGGGCUGAAUCCCCUGGGUUGUCACCAGAAGCGUUCGCAG
UCGGGCGUUUCGCAAGUGGUGGAGCACUUCUGGGUGA
>URS000065505D_316407 Escherichia coli str. K-12 substr. W3110 IS009
UGAAUGAUAAAAAUGGCGCAAAUACAGCGCCAUUUUUAUAGGUUAAAAACAUUGCUUUUUAUAUUCUGAUGCAGAUAGUC
AGUGAGUAUAUCGCGCUACUUCAGGAUGAUGUAGAUCCGAAGAACGCUACAGAAGAGAGGCAUUGUUGCUGGCAAAUAGA
AGAAGUAUCGGGUUUUGUUACCCCUGAAAAACGAAGCCCC
>URS000065505D_879462 Escherichia coli str. K-12 substr. MG1655star IS009
UGAAUGAUAAAAAUGGCGCAAAUACAGCGCCAUUUUUAUAGGUUAAAAACAUUGCUUUUUAUAUUCUGAUGCAGAUAGUC
AGUGAGUAUAUCGCGCUACUUCAGGAUGAUGUAGAUCCGAAGAACGCUACAGAAGAGAGGCAUUGUUGCUGGCAAAUAGA
AGAAGUAUCGGGUUUUGUUACCCCUGAAAAACGAAGCCCC
>URS0000689093_879462 Escherichia coli str. K-12 substr. MG1655star Enterobacterial sRNA STnc370
ACCGAAAGACGAUUAAUUUCGUUUUUUAGUCAUAAAAAACCUGCCAGCGAUGGCAGGUUUUUUUUGCC
>URS0000528960_316407 Escherichia coli str. K-12 substr. W3110 OmrA-B family
CCCAGAGGUAUUGAUAGGUGAAGUCAACUUCGGGUUGAGCACAUGAAUUACACCAGCCUGCGCAGAUGCGCAGGUUUUUU
UU
>URS00004CBB1A_316407 Escherichia coli str. K-12 substr. W3110 sroB RNA
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUU
UUUU
>URS0000601B65_879462 Escherichia coli str. K-12 substr. MG1655star rseX Hfq binding RNA
UUUUUAUUAUUCUGUGUCAUGAUGCUUCCGUUAUUAGCCUUUUAUCGUCUUGUUUAUAUUUUUUGGGCCGGCAUGAUGCC
GGCUUUUUUU
>URS000063C6B5_316407 Escherichia coli str. K-12 substr. W3110 Salmonella enterica Typhi npcRNA 44
CUUUAAAAAUCUGGAUCAAGCUGAAAAUUGAAACACUGAACAAUGAAAGUUGUUCGUGAGUCUCUCAAAUUUUCGCAACA
CGAUGAUGGAUCGCAAGAAACAUCUUCGG
>URS000063C6B5_316385 Escherichia coli str. K-12 substr. DH10B Salmonella enterica Typhi npcRNA 44
CUUUAAAAAUCUGGAUCAAGCUGAAAAUUGAAACACUGAACAAUGAAAGUUGUUCGUGAGUCUCUCAAAUUUUCGCAACA
CGAUGAUGGAUCGCAAGAAACAUCUUCGG
>URS00000ED6EE_316407 Escherichia coli str. K-12 substr. W3110 Enterobacterial sRNA STnc540
UCAGACCCGGGCAGAAGUUAAAAAGCCGGGUCGAAAACGCUUCGCCCAAAGACGAGUAAUCUGAUCUAACUAAAAAGGCC
GCUCUGCGGCCUUUUUUCUUUUCACUGUCGAAGAGUCACCGUAAAAUCAACGCCAUGACACUUCAGCAGAACGGAUACC
>URS00000ED6EE_879462 Escherichia coli str. K-12 substr. MG1655star Enterobacterial sRNA STnc540
UCAGACCCGGGCAGAAGUUAAAAAGCCGGGUCGAAAACGCUUCGCCCAAAGACGAGUAAUCUGAUCUAACUAAAAAGGCC
GCUCUGCGGCCUUUUUUCUUUUCACUGUCGAAGAGUCACCGUAAAAUCAACGCCAUGACACUUCAGCAGAACGGAUACC
>URS00005C8E9E_316385 Escherichia coli str. K-12 substr. DH10B sroH RNA
GAAAAUAAGAACACAUGUUCUCAUCUUCCAGGAUGCAGCAGACUGAAGAAAUUCAGACAUCCCGCAACCUGCGAUUAUCG
CAAGGUCAAGGCAAAGUCCGGUAAUGGCGUUCUGAAUACCAGAGAUAAUUCUCUGGCGAAACCCACCUUAAGGUGGGUUU
U
>URS0000696027_316385 Escherichia coli str. K-12 substr. DH10B Enterobacterial sRNA STnc550
UCCAUUUCACUCCAGACCCUAACUUCAGCUCCUGCAAAAUCGCAAGGUAAACGUUUGCCUUUACACACCUUACGCACAAC
AAAAGUGUUGCGGUACGCCGGAAAAACGACACGGAGCGUCAGGAAGGGGUCAAUGGCCAGUACGCAAAUAGUGUAAGCGU
GGAAUUUUGGCCGAUCUUGACGAAAAGGGGAAGUGGUAAAAACACUUAUCAUUAUAAAUGACGGGAGAUUUUUUCAUCAC
AGUGUGUAAAAAUGCGUAAUAUCACUUUUUGUGUGGUAAUAAAAAAGGAGAAAACUUGAUGAGCACCGACCUUAAAUUUU
CACUGGUAACAACGAUUAUCGUCCUCGGUUUGAUCGUAGCCGUGGGUUUGACUGCCGCGCUGCACUGAUUU
>URS00003A4668_879462 Escherichia coli str. K-12 substr. MG1655star OmrA-B family
CCCAGAGGUAUUGAUUGGUGAGAUUAUUCGGUACGCUCUUCGUACCCUGUCUCUUGCACCAACCUGCGCGGAUGCGCAGG
UUUUUUUU
>URS00004200E4_879462 Escherichia coli str. K-12 substr. MG1655star CRISPR RNA direct repeat element
GUUCACUGCCGUACAGGCAGCUUAGAAA
>URS000065505D_316385 Escherichia coli str. K-12 substr. DH10B IS009
UGAAUGAUAAAAAUGGCGCAAAUACAGCGCCAUUUUUAUAGGUUAAAAACAUUGCUUUUUAUAUUCUGAUGCAGAUAGUC
AGUGAGUAUAUCGCGCUACUUCAGGAUGAUGUAGAUCCGAAGAACGCUACAGAAGAGAGGCAUUGUUGCUGGCAAAUAGA
AGAAGUAUCGGGUUUUGUUACCCCUGAAAAACGAAGCCCC
>URS00003982CB_879462 Escherichia coli str. K-12 substr. MG1655star TPP riboswitch (THI element)
AAUUUCUUGUCGGAGUGCCUUAACUGGCUGAGACCGUUUAUUCGGGAUCCGCGGAACCUGAUCAGGCUAAUACCUGCGAA
GGGAACAAGAGUUAAUCUGCU
>URS00003982CB_316385 Escherichia coli str. K-12 substr. DH10B TPP riboswitch (THI element)
AAUUUCUUGUCGGAGUGCCUUAACUGGCUGAGACCGUUUAUUCGGGAUCCGCGGAACCUGAUCAGGCUAAUACCUGCGAA
GGGAACAAGAGUUAAUCUGCU
>URS00006328D8_316407 Escherichia coli str. K-12 substr. W3110 MicC RNA
CGGGUUAUAUGCCUUUAUUGUCACAGAUUUUAUUUUCUGUUGGGCCAUUGCAUUGCCACUGAUUUUCCAACAUAUAAAAA
GACAAGCCCGAACAGUCGUCCGGGCUUUUUUUUUAGAAUUG
>URS00006328D8_879462 Escherichia coli str. K-12 substr. MG1655star MicC RNA
CGGGUUAUAUGCCUUUAUUGUCACAGAUUUUAUUUUCUGUUGGGCCAUUGCAUUGCCACUGAUUUUCCAACAUAUAAAAA
GACAAGCCCGAACAGUCGUCCGGGCUUUUUUUUUAGAAUUG
>URS00006D157A_879462 Escherichia coli str. K-12 substr. MG1655star CsrB/RsmB RNA family
GAGUCAGACAACGAAGUGAACAUCAGGAUGAUGACACUUCUGCAGGACACACCAGGAUGGUGUUUCAGGGAAAGGCUUCU
GGAUGAAGCGAAGAGGAUGACGCAGGACGCGUUAAAGGACACCUCCAGGAUGGAGAAUGAGAACCGGUCAGGAUGAUUCG
GUGGGUCAGGAAGGCCAGGGACACUUCAGGAUGAAGUAUCACAUCGGGGUGGUGUGAGCAGGAAGCAAUAGUUCAGGAUG
AACGAUUGGCCGCAAGGCCAGAGGAAAAGUUGUCAAGGAUGAGCAGGGAGCAACAAAAGUAGCUGGAAUGCUGCGAAACG
AACCGGGAGCGCUGUGAAUACAGUGCUCCCUUUUUUAUUC
>URS00006A201E_316385 Escherichia coli str. K-12 substr. DH10B Salmonella enterica Typhi npcRNA 44
CUUUAAAAAUCUGGAUCAAGCUGAAAAUUGAAACACUGAACAAUGAAAGUUGUUCGUGAGUCUCUCAAAUUUUCGCAACU
CUGAAGUGAAACAUCUUCGG
>URS00000ED6EE_316385 Escherichia coli str. K-12 substr. DH10B Enterobacterial sRNA STnc540
UCAGACCCGGGCAGAAGUUAAAAAGCCGGGUCGAAAACGCUUCGCCCAAAGACGAGUAAUCUGAUCUAACUAAAAAGGCC
GCUCUGCGGCCUUUUUUCUUUUCACUGUCGAAGAGUCACCGUAAAAUCAACGCCAUGACACUUCAGCAGAACGGAUACC
>URS000009B1F3_879462 Escherichia coli str. K-12 substr. MG1655star Short Intergenic Abundant RNA
UUGACGCUGAUUUUUUUUCAACCUAAAGUAAAGGAACAAGGGUGAGGGAGGAUUUCUCCCCCCUCUGAUUGGCUGUUAAU
AAGCUGCGAAACUUACGAGUAACAACACAAUCAGUAUGAUGACGAGCUUCAUCAUAACCCUUUCCUUCUG
>URS0000601B65_316385 Escherichia coli str. K-12 substr. DH10B rseX Hfq binding RNA
UUUUUAUUAUUCUGUGUCAUGAUGCUUCCGUUAUUAGCCUUUUAUCGUCUUGUUUAUAUUUUUUGGGCCGGCAUGAUGCC
GGCUUUUUUU
>URS000006C687_879462 Escherichia coli str. K-12 substr. MG1655star ryfA RNA
GCGGCCCUUUCCGCCGUCUCGCAAACGGGCGCUGGCUUUAGGAAAGGAUGUUCCGUGGCCGUAAAUGCAGGUGUUUCACA
GCGCUUGCUAUCGCGGCAAUAUCGCCAGUGGUGCUGUCGUGAUGCGGUCUUCGCAUGGACCGCACAAUGAAGAUACGGUG
CUUUUGUAUCGUACUUAUUGUUUCUGGUGCGCUGUUAACCGAGGUAAAUAAUAACCGGAGUCUCUCCGGCGACAAUUUAC
UGGUGGUUAACAACCUUCAGAGCAGCAAGUAAGCCCGAAUGCCGCCCUUUGGGCGGCAUAUUUU
>URS0000543C9D_879462 Escherichia coli str. K-12 substr. MG1655star sroC RNA
ACUAAUUACAAGAACCAGGGGCGGAAAUUCCAGCCCUCUCGAUUGUUACGUAGCACGGACAGACUAUACGCCUGAUGGUC
GUUCCCCAUCGGGCCUGAAAACCGCAAUACGCUGGGUAACAAUCUUCGAGGGUAGCAGUUAACGCUGCUACCCUCUUUUU
UCU
>URS00006B9CC6_316385 Escherichia coli str. K-12 substr. DH10B IS009
UGAAGGAUACGGAAGCAGAAAAACUGUUCCGGAUCCGGGAGGCGGAAGAAACAAAAAACAACCUGAUGCAGGUAGCCAGU
GAGCAUAUUGCGCCGCUUCAGGAUGCUGCAGAUCUGGAAAUUGCAACGGAGGAAGAAAUCUCGUUGCUGGAAGCAUGGAA
AAAGUAUCGGGUAUUGCUGAACCGUGUUGAUACGUCAAC
>URS00006A1E14_316385 Escherichia coli str. K-12 substr. DH10B Enterobacterial sRNA STnc70
AAGGGCAACACCUCAGCCUGCAGGCAGGCACUGAAGAUACCAAAGGGUAGUUCAGAUUACACGGUCACCUGGAAAGGGGG
CCAUUUUACUUUUU
>URS000053ACE7_316407 Escherichia coli str. K-12 substr. W3110 sroD RNA
UUACGUGACGAAGCGCGCGGCAAAGUGGACAAUAAAGCCUGAGCGUUAAGUCAGUCGUCAGACGCCGGUUAAUCCGGCGU
UUUUUU
>URS000053ACE7_879462 Escherichia coli str. K-12 substr. MG1655star sroD RNA
UUACGUGACGAAGCGCGCGGCAAAGUGGACAAUAAAGCCUGAGCGUUAAGUCAGUCGUCAGACGCCGGUUAAUCCGGCGU
UUUUUU
>URS000039B80D_316407 Escherichia coli str. K-12 substr. W3110 C0719 RNA
UAUAGGCGUUAUACUUUACAGCAACAGUACGCCGCUAACGCAAUUGCUACCUCUGGCAUAACAAGUAUAUCGGGUAAGGG
UUUCUGUUCCGCACACGCAGACGCAGAGUAUCGUUAAGAUGUCCAUAUUGUUGUUUUAGGCCCGCUAGUAAUGCGCUACG
GGUAUUUAAUAUUGUUAAACCCUGAUAAUCGCUCCGGUUAUUUCCGGGAUAAAUGUACUACC
>URS000039E69D_879462 Escherichia coli str. K-12 substr. MG1655star TPP riboswitch (THI element)
CCAAACGACUCGGGGUGCCCUUCUGCGUGAAGGCUGAGAAAUACCCGUAUCACCUGAUCUGGAUAAUGCCAGCGUAGGGA
AGUCACGGACCACCAGG
>URS000063C6B5_879462 Escherichia coli str. K-12 substr. MG1655star Salmonella enterica Typhi npcRNA 44
CUUUAAAAAUCUGGAUCAAGCUGAAAAUUGAAACACUGAACAAUGAAAGUUGUUCGUGAGUCUCUCAAAUUUUCGCAACA
CGAUGAUGGAUCGCAAGAAACAUCUUCGG
>URS00006D7E9B_316385 Escherichia coli str. K-12 substr. DH10B tpke11
AACGGGUAAUUAUACUGACACGGGCGAAGGGGAAUUUCCUCUCCGCCCGUGCAUUCAUCUAGGGGCAAUUUAAAAAAG
>URS00005E2A61_316385 Escherichia coli str. K-12 substr. DH10B sroE RNA
AUAACGUGAUGGGAAGCGCCUCGCUUCCCGUGUAUGAUUGAACCCGCAUGGCUCCCGAAACAUUGAGGGAAGCGUUGAGG
GUUCAUUUUUAU
>URS00004CBB1A_879462 Escherichia coli str. K-12 substr. MG1655star sroB RNA
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUU
UUUU
>URS000049EAA4_316407 Escherichia coli str. K-12 substr. W3110 Oppression of Hydrophobic ORF by sRNA
GUUGAGGGUGCAUGCUGCACAAAAUUAAAGUUAAAAAGUAAAACCCCCGUUCCUUACCAGUUCGGGGGUUUUACUUU
>URS00006B9CC6_316407 Escherichia coli str. K-12 substr. W3110 IS009
UGAAGGAUACGGAAGCAGAAAAACUGUUCCGGAUCCGGGAGGCGGAAGAAACAAAAAACAACCUGAUGCAGGUAGCCAGU
GAGCAUAUUGCGCCGCUUCAGGAUGCUGCAGAUCUGGAAAUUGCAACGGAGGAAGAAAUCUCGUUGCUGGAAGCAUGGAA
AAAGUAUCGGGUAUUGCUGAACCGUGUUGAUACGUCAAC
>URS00005C8E9E_316407 Escherichia coli str. K-12 substr. W3110 sroH RNA
GAAAAUAAGAACACAUGUUCUCAUCUUCCAGGAUGCAGCAGACUGAAGAAAUUCAGACAUCCCGCAACCUGCGAUUAUCG
CAAGGUCAAGGCAAAGUCCGGUAAUGGCGUUCUGAAUACCAGAGAUAAUUCUCUGGCGAAACCCACCUUAAGGUGGGUUU
U
>URS00005C8E9E_879462 Escherichia coli str. K-12 substr. MG1655star sroH RNA
GAAAAUAAGAACACAUGUUCUCAUCUUCCAGGAUGCAGCAGACUGAAGAAAUUCAGACAUCCCGCAACCUGCGAUUAUCG
CAAGGUCAAGGCAAAGUCCGGUAAUGGCGUUCUGAAUACCAGAGAUAAUUCUCUGGCGAAACCCACCUUAAGGUGGGUUU
U
>URS000049EAA4_879462 Escherichia coli str. K-12 substr. MG1655star Oppression of Hydrophobic ORF by sRNA
GUUGAGGGUGCAUGCUGCACAAAAUUAAAGUUAAAAAGUAAAACCCCCGUUCCUUACCAGUUCGGGGGUUUUACUUU
>URS00003876AA_316385 Escherichia coli str. K-12 substr. DH10B FMN riboswitch (RFN element)
GCUUAUUCUCAGGGCGGGGCGAAAUUCCCCACCGGCGGUAAAUCAACUCAGUUGAAAGCCCGCGAGCGCUUUGGGUGCGA
ACUCAAAGGACAGCAGAUCCGGUGUAAUUCCGGGGCCGACGGUUAGAGUCCGGAUGGGAGAGAGUAACG
>URS00006E54FA_879462 Escherichia coli str. K-12 substr. MG1655star Salmonella enterica Typhi npcRNA 44
CUUUAAAAAUCUGGAUCAAGCUGAAAAUUGAAACACUGAACAACGAGAGUUGUUCGUGAGUCUCUCAAAUUUUCGCAACA
CGAUGAUGAAUCGAAAGAAACAUCUUCGG
>URS00006874BE_316385 Escherichia coli str. K-12 substr. DH10B Salmonella enterica Typhi npcRNA 44
CUUUAAAAAUCUGGAUCAAGCUGAAAAUUGAAACACUGAACAACGAAAGUUGUUCGUGAGUCUCUCAAAUUUUCGCAACA
CGAUGAUGAAUCGAAAGAAACAUCUUCGG
>URS00006B944E_316407 Escherichia coli str. K-12 substr. W3110 Enterobacteria sRNA STnc130
UACAUCGAAUAAUUUGAAAAUCAAAGAGAUAGGUAGAUUUUCACUCGAAAGUAGUAUUACGUGUAAGUGAGGAGUAAUUA
UUGUUCGGUAUCAAAGGGAGACAAAAAAAGCGCCCGCAGGCGCUUUUUAGAUUCA
>URS000039B80D_879462 Escherichia coli str. K-12 substr. MG1655star C0719 RNA
UAUAGGCGUUAUACUUUACAGCAACAGUACGCCGCUAACGCAAUUGCUACCUCUGGCAUAACAAGUAUAUCGGGUAAGGG
UUUCUGUUCCGCACACGCAGACGCAGAGUAUCGUUAAGAUGUCCAUAUUGUUGUUUUAGGCCCGCUAGUAAUGCGCUACG
GGUAUUUAAUAUUGUUAAACCCUGAUAAUCGCUCCGGUUAUUUCCGGGAUAAAUGUACUACC
>URS0000632063_879462 Escherichia coli str. K-12 substr. MG1655star Staphylococcus sRNA sau-50
CAAAUGCCGGUACGUUAGCUGCGGCAAUUUUGAUUUCUUUACCGGUCUGCGGGUUGCGGCCAGUACGCUCAGCGCGGUGG
UUCACUUUGAAGGUACCGAAACCAACCAGUUGUACAGCAUCGCCUUCUUUCAGAGACUCAGUAAUUGCAGCC
>URS000049EAA4_316385 Escherichia coli str. K-12 substr. DH10B Oppression of Hydrophobic ORF by sRNA
GUUGAGGGUGCAUGCUGCACAAAAUUAAAGUUAAAAAGUAAAACCCCCGUUCCUUACCAGUUCGGGGGUUUUACUUU
>URS0000601B65_316407 Escherichia coli str. K-12 substr. W3110 rseX Hfq binding RNA
UUUUUAUUAUUCUGUGUCAUGAUGCUUCCGUUAUUAGCCUUUUAUCGUCUUGUUUAUAUUUUUUGGGCCGGCAUGAUGCC
GGCUUUUUUU
>URS00006CAD46_879462 Escherichia coli str. K-12 substr. MG1655star Salmonella enterica Typhi npcRNA 44
CUUUAAAAAUCUGGAUCAAGCUGAAAAUUGAAACACUGAACAACGAAAGUUGUUCGUGAGUCUCUCAAAUUUUUCGCAAC
ACGAUGAUGAAUCGUAAGAAACAUCUUCGG
>URS00004A6236_316407 Escherichia coli str. K-12 substr. W3110 MicA sRNA
GAAAGACGCGCAUUUGUUAUCAUCAUCCCUGAAUUCAGAGAUGAAAUUUUGGCCACUCACGAGUGGCCUUUU
>URS00001E4BD3_316385 Escherichia coli str. K-12 substr. DH10B sraA
AUGUACGUCAGUAUAUGGGGAUGUUUCCCCCACAUUCAACGCCGAGAAUAGAGGAAAAAUUAAAGGGGAGAUAAAAUCCC
CCCUUUUUGGUUAACU
>URS00006E02FD_879462 Escherichia coli str. K-12 substr. MG1655star Enterobacterial sRNA STnc430
AAAAGCAAUUAAUCUGCGUAUUUUCCGAAAUAAACAACGAUUAAAAAUCUAUUUUAGGAUUAACCUCACGGUAUGAUUUC
CGUUAAAUUACAGACAAGGGGAUUUAUCUGAUAAAAAAAUGCCGACAUAACGUCGGCAUUGUUAUUAAGG
>URS00006E02FD_316385 Escherichia coli str. K-12 substr. DH10B Enterobacterial sRNA STnc430
AAAAGCAAUUAAUCUGCGUAUUUUCCGAAAUAAACAACGAUUAAAAAUCUAUUUUAGGAUUAACCUCACGGUAUGAUUUC
CGUUAAAUUACAGACAAGGGGAUUUAUCUGAUAAAAAAAUGCCGACAUAACGUCGGCAUUGUUAUUAAGG
>URS00006520C8_316385 Escherichia coli str. K-12 substr. DH10B Glm Y RNA activator of glmS mRNA
AGUGGCUCAUUCACCGACUUAUGUCAGCCCCUUCGGGACGUGCUACAUAAAAUACGAAUGACGCACAACAAGGUGCCUGC
CGUCCAACUUCUGAUAUCAGCGUAGCUAUAUCAACCAUCGGGCGAAACGUCGAGUUAGGCACCGCCUU
>URS00003982CB_316407 Escherichia coli str. K-12 substr. W3110 TPP riboswitch (THI element)
AAUUUCUUGUCGGAGUGCCUUAACUGGCUGAGACCGUUUAUUCGGGAUCCGCGGAACCUGAUCAGGCUAAUACCUGCGAA
GGGAACAAGAGUUAAUCUGCU
>URS0000700CD4_316407 Escherichia coli str. K-12 substr. W3110 IS009
UGAAAGAUGCAGAAGCAGAAAAACUGUUCCGGAUUCGGGAGGCGGAAGAAACAAAAAACAGCCUGAUGCAGGUAGCCAGU
GAGCAUAUUGCGCCACUUCAGGAUGCUGUAGAUCUGGAAAUCGCAACGGAGGAAGAAACCUCAUUGCUGGAAGCCUGGAA
AAAAUAUCGGGUGUUGCUGAACCGUGUUGAUACAUCAAC
>URS0000700CD4_879462 Escherichia coli str. K-12 substr. MG1655star IS009
UGAAAGAUGCAGAAGCAGAAAAACUGUUCCGGAUUCGGGAGGCGGAAGAAACAAAAAACAGCCUGAUGCAGGUAGCCAGU
GAGCAUAUUGCGCCACUUCAGGAUGCUGUAGAUCUGGAAAUCGCAACGGAGGAAGAAACCUCAUUGCUGGAAGCCUGGAA
AAAAUAUCGGGUGUUGCUGAACCGUGUUGAUACAUCAAC
>URS0000700CD4_316385 Escherichia coli str. K-12 substr. DH10B IS009
UGAAAGAUGCAGAAGCAGAAAAACUGUUCCGGAUUCGGGAGGCGGAAGAAACAAAAAACAGCCUGAUGCAGGUAGCCAGU
GAGCAUAUUGCGCCACUUCAGGAUGCUGUAGAUCUGGAAAUCGCAACGGAGGAAGAAACCUCAUUGCUGGAAGCCUGGAA
AAAAUAUCGGGUGUUGCUGAACCGUGUUGAUACAUCAAC
>URS0000018BA8_879462 Escherichia coli str. K-12 substr. MG1655star RybB RNA
ACUGCUUUUCUUUGAUGUCCCCAUUUUGUGGAGCCCAUCAACCCCGCCAUUUCGGUUCAAGGUUGAUGGGUUUUUUGUU
>URS00001E4194_316407 Escherichia coli str. K-12 substr. W3110 SdsR_RyeB RNA
AGGCAACUAAGCCUGCAUUAAUGCCAACUUUUAGCGCACGGCUCUCUCCCAAGAGCCAUUUCCCUGGACCGAAUACAGGA
AUCGUGUUCGGUCUCUUUUU
>URS00001E53D4_316407 Escherichia coli str. K-12 substr. W3110 SraG RNA
CUUCUGCGCAUCCUCGCGACUAAUGACAACCCUAACCCAGCUCUAUGUGGGUAAAGCCUCUCAUUAGCCGCGCGAACCUC
UGCAACGGAAGAUCAUUCAUAGCAACAAUACAUUAGUUUCCAGUGAAUUGCUGCCGUCAGCUUGAAAAAAGGGGCCACUC
AGGCCCCCUUUU
>URS00006E54FA_316385 Escherichia coli str. K-12 substr. DH10B Salmonella enterica Typhi npcRNA 44
CUUUAAAAAUCUGGAUCAAGCUGAAAAUUGAAACACUGAACAACGAGAGUUGUUCGUGAGUCUCUCAAAUUUUCGCAACA
CGAUGAUGAAUCGAAAGAAACAUCUUCGG
>URS00006B944E_879462 Escherichia coli str. K-12 substr. MG1655star Enterobacteria sRNA STnc130
UACAUCGAAUAAUUUGAAAAUCAAAGAGAUAGGUAGAUUUUCACUCGAAAGUAGUAUUACGUGUAAGUGAGGAGUAAUUA
UUGUUCGGUAUCAAAGGGAGACAAAAAAAGCGCCCGCAGGCGCUUUUUAGAUUCA
>URS00001AA27A_879462 Escherichia coli str. K-12 substr. MG1655star C0465 RNA
GGGAAACUUUAUUGCUGAUGCCACCCGCCGCGAAAUUGAAAUAAAAAACCCGAUGCGCAGAUCAUCGGGUUCAUUUCA
>URS00006520C8_879462 Escherichia coli str. K-12 substr. MG1655star Glm Y RNA activator of glmS mRNA
AGUGGCUCAUUCACCGACUUAUGUCAGCCCCUUCGGGACGUGCUACAUAAAAUACGAAUGACGCACAACAAGGUGCCUGC
CGUCCAACUUCUGAUAUCAGCGUAGCUAUAUCAACCAUCGGGCGAAACGUCGAGUUAGGCACCGCCUU
>URS00006B944E_316385 Escherichia coli str. K-12 substr. DH10B Enterobacteria sRNA STnc130
UACAUCGAAUAAUUUGAAAAUCAAAGAGAUAGGUAGAUUUUCACUCGAAAGUAGUAUUACGUGUAAGUGAGGAGUAAUUA
UUGUUCGGUAUCAAAGGGAGACAAAAAAAGCGCCCGCAGGCGCUUUUUAGAUUCA
>URS000039B80D_316385 Escherichia coli str. K-12 substr. DH10B C0719 RNA
UAUAGGCGUUAUACUUUACAGCAACAGUACGCCGCUAACGCAAUUGCUACCUCUGGCAUAACAAGUAUAUCGGGUAAGGG
UUUCUGUUCCGCACACGCAGACGCAGAGUAUCGUUAAGAUGUCCAUAUUGUUGUUUUAGGCCCGCUAGUAAUGCGCUACG
GGUAUUUAAUAUUGUUAAACCCUGAUAAUCGCUCCGGUUAUUUCCGGGAUAAAUGUACUACC
>URS00001E4194_879462 Escherichia coli str. K-12 substr. MG1655star SdsR_RyeB RNA
AGGCAACUAAGCCUGCAUUAAUGCCAACUUUUAGCGCACGGCUCUCUCCCAAGAGCCAUUUCCCUGGACCGAAUACAGGA
AUCGUGUUCGGUCUCUUUUU
>URS00001E53D4_879462 Escherichia coli str. K-12 substr. MG1655star SraG RNA
CUUCUGCGCAUCCUCGCGACUAAUGACAACCCUAACCCAGCUCUAUGUGGGUAAAGCCUCUCAUUAGCCGCGCGAACCUC
UGCAACGGAAGAUCAUUCAUAGCAACAAUACAUUAGUUUCCAGUGAAUUGCUGCCGUCAGCUUGAAAAAAGGGGCCACUC
AGGCCCCCUUUU
>URS00001855A3_316407 Escherichia coli str. K-12 substr. W3110 Lysine riboswitch
CAGGCCAGAAGAGGCGCGUUGCCCAAGUAACGGUGUUGGAGGAGCCAGUCCUGUGAUAACACCUGAGGGGGUGCAUCGCC
GAGGUGAUUGAACGGCUGGCCACGUUCAUCAUCGGCUACAGGGGCUGAAUCCCCUGGGUUGUCACCAGAAGCGUUCGCAG
UCGGGCGUUUCGCAAGUGGUGGAGCACUUCUGGGUGA
>URS00006520C8_316407 Escherichia coli str. K-12 substr. W3110 Glm Y RNA activator of glmS mRNA
AGUGGCUCAUUCACCGACUUAUGUCAGCCCCUUCGGGACGUGCUACAUAAAAUACGAAUGACGCACAACAAGGUGCCUGC
CGUCCAACUUCUGAUAUCAGCGUAGCUAUAUCAACCAUCGGGCGAAACGUCGAGUUAGGCACCGCCUU
>URS00006E54FA_316407 Escherichia coli str. K-12 substr. W3110 Salmonella enterica Typhi npcRNA 44
CUUUAAAAAUCUGGAUCAAGCUGAAAAUUGAAACACUGAACAACGAGAGUUGUUCGUGAGUCUCUCAAAUUUUCGCAACA
CGAUGAUGAAUCGAAAGAAACAUCUUCGG
>URS00006E5C6D_879462 Escherichia coli str. K-12 substr. MG1655star IS009
AAGGAUACGGAAGCAGAAAAACUGUUCCGGAUCCGGGAGGCGGAAGAAACAAAAAACAACCUGAUGCAGGUAGCCAGUGA
GCAUAUUGCGCCGCUUCAGGAUGCUGCAGAUCUGGAAAUUGCAACGGAGGAAGAAAUCUCGUUGCUGGAAGCAUGGAAAA
AGUAUCGGGUAUUGCUGAACCGUGUUGAUACGUCAAC
>URS000068CACC_316407 Escherichia coli str. K-12 substr. W3110 Enterobacterial sRNA STnc480
UUACAAAAAAAGCCACGGUAUAAACCGUGGCAAAAUCCAACAUAGCUAAAAAUAAUCAGGCGAGUGG
>URS00006C2A48_316385 Escherichia coli str. K-12 substr. DH10B istR Hfq binding RNA
CGUCAAAAUUCGUGCCGAAAUUGCGCGUUCUGCGCGGAACACGUAUACUUUCAGUGUUGACAUAAUACAGUGUGCUUUGC
GGUUACCAGCCGCAGGCGACUGACGAAACCUCGCUCCGGCGGGGUUUUUU
>URS0000265A50_879462 Escherichia coli str. K-12 substr. MG1655star sraL Hfq binding RNA
AUCAACACCAACCGGAACCUCCACCACGUGCUCGAAUGAGGUGUGUUGACGUCGGGGGAAACCCUCCUGUGUACCAGCGG
GAUAGAGAGAAAGACAAAGACCGGAAAACAAACUAAAGCGCCCUUGUGGCGCUUUAGUUUU
>URS00003876AA_879462 Escherichia coli str. K-12 substr. MG1655star FMN riboswitch (RFN element)
GCUUAUUCUCAGGGCGGGGCGAAAUUCCCCACCGGCGGUAAAUCAACUCAGUUGAAAGCCCGCGAGCGCUUUGGGUGCGA
ACUCAAAGGACAGCAGAUCCGGUGUAAUUCCGGGGCCGACGGUUAGAGUCCGGAUGGGAGAGAGUAACG
>URS00006B0E17_316407 Escherichia coli str. K-12 substr. W3110 STnc560 Hfq binding RNA
CAUUCAUUGAGAAAACUGAUGCUACUGUGUCAACGAUUCGUUAUCAGUGCAGGAAAAUGCCUGUUAGCGUAAAAGCAAAA
CACAAAUCUAUCCAUGCAAGCAUUCACCGCCGGUUUACUGGCGGUUUUUUUUCGCCGUCAUAAAAAUCAGGCCCCUUGUA
CACAACUGUAACAAGGGGCCGGUUAGGUGAGGGAUUAUCUCCGUUCAUUAGUCA
>URS00006B0E17_879462 Escherichia coli str. K-12 substr. MG1655star STnc560 Hfq binding RNA
CAUUCAUUGAGAAAACUGAUGCUACUGUGUCAACGAUUCGUUAUCAGUGCAGGAAAAUGCCUGUUAGCGUAAAAGCAAAA
CACAAAUCUAUCCAUGCAAGCAUUCACCGCCGGUUUACUGGCGGUUUUUUUUCGCCGUCAUAAAAAUCAGGCCCCUUGUA
CACAACUGUAACAAGGGGCCGGUUAGGUGAGGGAUUAUCUCCGUUCAUUAGUCA
>URS00006B0E17_316385 Escherichia coli str. K-12 substr. DH10B STnc560 Hfq binding RNA
CAUUCAUUGAGAAAACUGAUGCUACUGUGUCAACGAUUCGUUAUCAGUGCAGGAAAAUGCCUGUUAGCGUAAAAGCAAAA
CACAAAUCUAUCCAUGCAAGCAUUCACCGCCGGUUUACUGGCGGUUUUUUUUCGCCGUCAUAAAAAUCAGGCCCCUUGUA
CACAACUGUAACAAGGGGCCGGUUAGGUGAGGGAUUAUCUCCGUUCAUUAGUCA
>URS00006296AF_316407 Escherichia coli str. K-12 substr. W3110 IS128 RNA
UUUAGCGUAUUAUCGACACCGGCCCUUUCCGCCGUGUUCGGUAAUAAAAUAACCUGGCUUAUUAGUCCGAAUUCAGACAA
AUAUAAAUAAAUCCUGCUCAAAAUUAAAAAUUCUAACCGGUAAAAGAUAUUACUUAAACAUGUAAAUUCACUUUCCUUUA
AAAAACAAAAAACCGCCAAAAUCAGGCGGUUUUUUGUUGCUGGUCCGGU
>URS00006296AF_879462 Escherichia coli str. K-12 substr. MG1655star IS128 RNA
UUUAGCGUAUUAUCGACACCGGCCCUUUCCGCCGUGUUCGGUAAUAAAAUAACCUGGCUUAUUAGUCCGAAUUCAGACAA
AUAUAAAUAAAUCCUGCUCAAAAUUAAAAAUUCUAACCGGUAAAAGAUAUUACUUAAACAUGUAAAUUCACUUUCCUUUA
AAAAACAAAAAACCGCCAAAAUCAGGCGGUUUUUUGUUGCUGGUCCGGU
>URS00006296AF_316385 Escherichia coli str. K-12 substr. DH10B IS128 RNA
UUUAGCGUAUUAUCGACACCGGCCCUUUCCGCCGUGUUCGGUAAUAAAAUAACCUGGCUUAUUAGUCCGAAUUCAGACAA
AUAUAAAUAAAUCCUGCUCAAAAUUAAAAAUUCUAACCGGUAAAAGAUAUUACUUAAACAUGUAAAUUCACUUUCCUUUA
AAAAACAAAAAACCGCCAAAAUCAGGCGGUUUUUUGUUGCUGGUCCGGU
>URS00001E4BD3_316407 Escherichia coli str. K-12 substr. W3110 sraA
AUGUACGUCAGUAUAUGGGGAUGUUUCCCCCACAUUCAACGCCGAGAAUAGAGGAAAAAUUAAAGGGGAGAUAAAAUCCC
CCCUUUUUGGUUAACU
>URS00001E4BD3_879462 Escherichia coli str. K-12 substr. MG1655star sraA
AUGUACGUCAGUAUAUGGGGAUGUUUCCCCCACAUUCAACGCCGAGAAUAGAGGAAAAAUUAAAGGGGAGAUAAAAUCCC
CCCUUUUUGGUUAACU
>URS00006874BE_316407 Escherichia coli str. K-12 substr. W3110 Salmonella enterica Typhi npcRNA 44
CUUUAAAAAUCUGGAUCAAGCUGAAAAUUGAAACACUGAACAACGAAAGUUGUUCGUGAGUCUCUCAAAUUUUCGCAACA
CGAUGAUGAAUCGAAAGAAACAUCUUCGG
>URS00006874BE_879462 Escherichia coli str. K-12 substr. MG1655star Salmonella enterica Typhi npcRNA 44
CUUUAAAAAUCUGGAUCAAGCUGAAAAUUGAAACACUGAACAACGAAAGUUGUUCGUGAGUCUCUCAAAUUUUCGCAACA
CGAUGAUGAAUCGAAAGAAACAUCUUCGG
>URS0000632063_316385 Escherichia coli str. K-12 substr. DH10B Staphylococcus sRNA sau-50
CAAAUGCCGGUACGUUAGCUGCGGCAAUUUUGAUUUCUUUACCGGUCUGCGGGUUGCGGCCAGUACGCUCAGCGCGGUGG
UUCACUUUGAAGGUACCGAAACCAACCAGUUGUACAGCAUCGCCUUCUUUCAGAGACUCAGUAAUUGCAGCC
>URS00003876AA_316407 Escherichia coli str. K-12 substr. W3110 FMN riboswitch (RFN element)
GCUUAUUCUCAGGGCGGGGCGAAAUUCCCCACCGGCGGUAAAUCAACUCAGUUGAAAGCCCGCGAGCGCUUUGGGUGCGA
ACUCAAAGGACAGCAGAUCCGGUGUAAUUCCGGGGCCGACGGUUAGAGUCCGGAUGGGAGAGAGUAACG
>URS00006EC0FB_316407 Escherichia coli str. K-12 substr. W3110 Enterobacterial sRNA STnc370
ACCGAAAGACGAUUAAUUUCGUUUUUUAGUCAUAAAAAACCUGCCAGCGAUGGCAGGUUUUUUUUUGCC
>URS0000528960_879462 Escherichia coli str. K-12 substr. MG1655star OmrA-B family
CCCAGAGGUAUUGAUAGGUGAAGUCAACUUCGGGUUGAGCACAUGAAUUACACCAGCCUGCGCAGAUGCGCAGGUUUUUU
UU
>URS0000528960_316385 Escherichia coli str. K-12 substr. DH10B OmrA-B family
CCCAGAGGUAUUGAUAGGUGAAGUCAACUUCGGGUUGAGCACAUGAAUUACACCAGCCUGCGCAGAUGCGCAGGUUUUUU
UU
>URS00004FCB98_879462 Escherichia coli str. K-12 substr. MG1655star OxyS RNA
GAAACGGAGCGGCACCUCUUUUAACCCUUGAAGUCACUGCCCGUUUCGAGAGUUUCUCAACUCGAAUAACUAAAGCCAAC
GUGAACUUUUGCGGAUCUCCAGGAUCCGCU
>URS00006E589A_879462 Escherichia coli str. K-12 substr. MG1655star IS009
UGAAGGAUACGGAAGCAGAAAAACUGUUCCGGAUCCGGGAGGCGGAAGAACAAAACAACCUGAUGCAGGUAGCCAGUGAG
CAUAUUGCGCCGCUUCAGGAUGCUGCAGAUCUGGAAAUUGCAACGGAGGAAGAAAUCUCGUUGCUGGAAGCAUGGAAAAG
UAUCGGGUAUUGCUGAACCGUGUUGAUACGUCAAC
>URS000071BBB7_316407 Escherichia coli str. K-12 substr. W3110 Enterobacterial sRNA STnc410
AGGAUAAAUUGUUCAAUAACGGAUUAUCCCCGCUGACGAAAGCGCCAUUUUCGACCAUCGUCACGCCUUUUGUCUGCAGA
AAAUUAAGGCAGUACCUUAAUUUAAGCGUCAGGUGGAUGUUUUUGCUCUUAUUUCGAUCAAUGAAUAAACAGGAAAAC
>URS000071BBB7_879462 Escherichia coli str. K-12 substr. MG1655star Enterobacterial sRNA STnc410
AGGAUAAAUUGUUCAAUAACGGAUUAUCCCCGCUGACGAAAGCGCCAUUUUCGACCAUCGUCACGCCUUUUGUCUGCAGA
AAAUUAAGGCAGUACCUUAAUUUAAGCGUCAGGUGGAUGUUUUUGCUCUUAUUUCGAUCAAUGAAUAAACAGGAAAAC
>URS000071BBB7_316385 Escherichia coli str. K-12 substr. DH10B Enterobacterial sRNA STnc410
AGGAUAAAUUGUUCAAUAACGGAUUAUCCCCGCUGACGAAAGCGCCAUUUUCGACCAUCGUCACGCCUUUUGUCUGCAGA
AAAUUAAGGCAGUACCUUAAUUUAAGCGUCAGGUGGAUGUUUUUGCUCUUAUUUCGAUCAAUGAAUAAACAGGAAAAC
>URS00006EC0FB_316385 Escherichia coli str. K-12 substr. DH10B Enterobacterial sRNA STnc370
ACCGAAAGACGAUUAAUUUCGUUUUUUAGUCAUAAAAAACCUGCCAGCGAUGGCAGGUUUUUUUUUGCC
>URS0000696027_316407 Escherichia coli str. K-12 substr. W3110 Enterobacterial sRNA STnc550
UCCAUUUCACUCCAGACCCUAACUUCAGCUCCUGCAAAAUCGCAAGGUAAACGUUUGCCUUUACACACCUUACGCACAAC
AAAAGUGUUGCGGUACGCCGGAAAAACGACACGGAGCGUCAGGAAGGGGUCAAUGGCCAGUACGCAAAUAGUGUAAGCGU
GGAAUUUUGGCCGAUCUUGACGAAAAGGGGAAGUGGUAAAAACACUUAUCAUUAUAAAUGACGGGAGAUUUUUUCAUCAC
AGUGUGUAAAAAUGCGUAAUAUCACUUUUUGUGUGGUAAUAAAAAAGGAGAAAACUUGAUGAGCACCGACCUUAAAUUUU
CACUGGUAACAACGAUUAUCGUCCUCGGUUUGAUCGUAGCCGUGGGUUUGACUGCCGCGCUGCACUGAUUU
>URS000039A860_879462 Escherichia coli str. K-12 substr. MG1655star RprA RNA
ACGGUUAUAAAUCAACAUAUUGAUUUAUAAGCAUGGAAAUCCCCUGAGUGAAACAACGAAUUGCUGUGUGUAGUCUUUGC
CCAUCUCCCACGAUGGGCUUUUUUUUAA
>URS0000AB32EF_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGACGGAUAAGGCGUUCACGCCGCAUCCGGCAUUCAGUGCCUGAUGCGACGCUGACGCGUCUUAUCAGGCC
>URS0000AB32EF_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGACGGAUAAGGCGUUCACGCCGCAUCCGGCAUUCAGUGCCUGAUGCGACGCUGACGCGUCUUAUCAGGCC
>URS0000ABB645_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGGCGGAUAAGGCGUCCACGCCGCAUCCGCCAGUGGCGCGGUGCAGAUGCCGGAUGCGACGCUUGUCGCGUCUUAUCCGA
CC
>URS0000ABB645_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGGCGGAUAAGGCGUCCACGCCGCAUCCGCCAGUGGCGCGGUGCAGAUGCCGGAUGCGACGCUUGUCGCGUCUUAUCCGA
CC
>URS0000ABB971_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAACAGUGCCAACUGCCUGAUGCGACGCUUGCGCGUCUUAUCAGGCC
>URS0000ABB971_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAACAGUGCCAACUGCCUGAUGCGACGCUUGCGCGUCUUAUCAGGCC
>URS0000ABBD9D_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAAUGGUGCUCAACGCCUGAUGCGACGCUGGCGCGUCUUAUCAUGCC
>URS00001315A5_316407 Escherichia coli str. K-12 substr. W3110 RydC RNA
CUUCCGAUGUAGACCCGUAUUCUUCGCCUGUACCACGGGUCGGUUUUAGUACAGGCGUUUUCUU
>URS000016FBD9_316385 Escherichia coli str. K-12 substr. DH10B SraC/RyeA RNA
AGAUAAAAAGAGACCGAACACGAUUCCUGUAUUCGGUCCAGGGAAAUGGCUCUUGGGAGAGAGCCGUGCGCUAAAAGUUG
GCAUUAAUGCAGGCUUAGUUGCCUUGCCCUUUAAGAAUAGAUGACGACGCCAGGUUUUCCAGUUU
>URS0000265A50_316385 Escherichia coli str. K-12 substr. DH10B sraL Hfq binding RNA
AUCAACACCAACCGGAACCUCCACCACGUGCUCGAAUGAGGUGUGUUGACGUCGGGGGAAACCCUCCUGUGUACCAGCGG
GAUAGAGAGAAAGACAAAGACCGGAAAACAAACUAAAGCGCCCUUGUGGCGCUUUAGUUUU
>URS0000AB6266_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAAUAAGUGCUCCGAUGCCUGAUGCGACGCUUGCCGCGUCUUAUCAGGCC
>URS0000AB702B_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGGCGGAUAAGGCGUUUUUGCCGCAUCCGCCGUUCUGUGCACAAUGCCUGAUGCGACGCUGGCGCGUCUUAUCAUGCC
>URS0000AB702B_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGGCGGAUAAGGCGUUUUUGCCGCAUCCGCCGUUCUGUGCACAAUGCCUGAUGCGACGCUGGCGCGUCUUAUCAUGCC
>URS00003146CE_879462 Escherichia coli str. K-12 substr. MG1655star 6S / SsrS RNA
AUUUCUCUGAGAUGUUCGCAAGCGGGCCAGUCCCCUGAGCCGAUAUUUCAUACCACAAGAAUGUGGCGCUCCGCGGUUGG
UGAGCAUGCUCGGUCCGUCCGAGAAGCCUUAAAACUGCGACGACACAUUCACCUUGAACCAAGGGUUCAAGGGUUACAGC
CUGCGGCGGCAUCUCGGAGAUUCC
>URS0000AB7C4C_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGGCGGAUAAGGCGUUCACGCCGCAUCCGCCAGUGGCGCGGUGCAGUUGCCGGAUGCAACGCUUGCCGCGUUUUAUCCGG
CC
>URS0000ABAC3B_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGUUUACGCCGCAUCCGGCAGCCGUUGCCUGAUGCGACGCUGUGCGUCUUAUCAGGCC
>URS0000ABAFEC_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAAUCAAUGCCUGAUGCGACGCUGUCGCGUCUUAUCAGGCC
>URS0000ABBF7E_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCACUUGUGCCGCAUCCGGCAAUCAAUGCCUGAUGCGACGCUGUCGCGUCUUAUCAGGCC
>URS0000ABBF7E_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCACUUGUGCCGCAUCCGGCAAUCAAUGCCUGAUGCGACGCUGUCGCGUCUUAUCAGGCC
>URS0000ABC57C_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAGUCGGCGCAUAAUGCCUGAUGCGACGCUUGUCGCGUCUUAUCAUGCC
>URS0000ABC57C_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAGUCGGCGCAUAAUGCCUGAUGCGACGCUUGUCGCGUCUUAUCAUGCC
>URS0000ABCB74_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUAUGCCGCAUCCGGCAGUUAUGCGCAGAUGCCUGAUGCGACGCUGGCGCGUCUUAUCAUGCC
>URS0000225C84_316407 Escherichia coli str. K-12 substr. W3110 IS061 RNA
GCGGCUAUCUGCAAAGUUAAAACUGCAUAAAAAAAUAGAGUCUGUCGACAUCCGCCAGACUCUACAGUACACACAGCAGU
GCAUCCGCGUCUUAAAUCCGGCAUUGUCUCCUCUGCGCCGGUGACUGUGUUAUAACGGUUUUAACCUUUAGUUGCCAAUU
UUCUUCAGUGACAGAUUUCA
>URS00009DFFAD_316385 Escherichia coli str. K-12 substr. DH10B Cobalamin riboswitch
CUGUAGCAUCCACUUGCCGGUCCUGUGAGUUAAUAGGGAAUCCAGUGCGAAUCUGGAGCUGACGCGCAGCGGUAAGGAAA
GGUGCGAUGAUUGCGUUAUGCGGACACUGCCAUUCGGUGGGAAGUCAUCAUCUCUUAGUAUCUUAGAUACCCCUCCAAGC
CCGAAGACCUGCCGGCCAACGUCGCAUCUGG
>URS0000AB3ACF_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAACAGUGCCGACUGCCUGAUGCGACGCUCGCGCGUCUUAUCAGGCC
>URS0000AB3E28_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGCUCGCGCCGCAUCCGGCGAUGGUGCACUGAAGCCUGAUGCGACGCUUACCGCGUCUUAUCAUGCC
>URS0000AB3E28_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGCUCGCGCCGCAUCCGGCGAUGGUGCACUGAAGCCUGAUGCGACGCUUACCGCGUCUUAUCAUGCC
>URS0000AB4E0F_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCUGAUAAGACGCGUAAGCGUCGCAUCAGGCAAUGGUGCUCGGAUGCCGGAUGCGGCGUAAACGCCUUAUCCGGCC
>URS0000AB6F5E_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAAUGGUGCCGACUGCCUGAUGCGACGCUUGCGCGUCUUAUCAGGCC
>URS0000ABA73A_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCUGAUAAGACGCGUGAGCGUCGCAUCAGGCAUCGUUCACCAUUGCCGGAUGCGGCGUUAACGCCUUAUCCGGCC
>URS0000ABA73A_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCUGAUAAGACGCGUGAGCGUCGCAUCAGGCAUCGUUCACCAUUGCCGGAUGCGGCGUUAACGCCUUAUCCGGCC
>URS0000ABAFEC_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAAUCAAUGCCUGAUGCGACGCUGUCGCGUCUUAUCAGGCC
>URS0000ABAFEC_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAAUCAAUGCCUGAUGCGACGCUGUCGCGUCUUAUCAGGCC
>URS0000ABBDC6_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCUGCAUCCGGCACCCGGAGCCUGAUGCGACGCUGGCGCGUCUUAUCAGGCC
>URS0000ABBDC6_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCUGCAUCCGGCACCCGGAGCCUGAUGCGACGCUGGCGCGUCUUAUCAGGCC
>URS0000165C8D_879462 Escherichia coli str. K-12 substr. MG1655star Spot 42 RNA
AGUUAGUCGCGUAGGGUACAGAGGUAAGAUGUUCUAUCUUUCAGACCUUUUACUUCACGUAAUCGGAUUUGGCUGAAUAU
UUUAGCCGCCCCAGUCAGUAAUGACUGGGGCGUUUUUUA
>URS0000373BFC_879462 Escherichia coli str. K-12 substr. MG1655star ArcZ RNA
GUGCGGCCUGAAAAACAGUGCUGUGCCCUUGUAACUCAUCAUAAUAAUUUACGGCGCAGCCAAGAUUUCCCUGGUGUUGG
CGCAGUAUUCGCGCACCCCGGUCUAGCC
>URS0000AB27B2_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCAGAUAAGGCGUUCACGCCGCAUCUGGCAUUUGGCUCUCGAUGCCUGAUGCGACGCUGGCGCGUCUUAUCAUGCC
>URS0000AB410E_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGUUCACGCCGCAUCCGACAUUUGCACAAGAUGCCUGAUGCGACGCUGUCCGCGUCUUAUCAGGCC
>URS0000AB410E_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGUUCACGCCGCAUCCGACAUUUGCACAAGAUGCCUGAUGCGACGCUGUCCGCGUCUUAUCAGGCC
>URS0000AB44D4_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUCCCCGCCGCAUCCGGCACAGGCACCGUGCUGAUGUCUGAUGCGACGCUGGCGCGUCUUAUCAGAC
C
>URS0000AB4F6F_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUCCACGCCGCAUCCGGCAGUGGUGGCAAAUGCCUGAUGCGCUACGCUUAUCAGGCC
>URS0000AB61FF_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGUUCACGCCGCAUCCGACAGCCGUUGCCUGAUGCGACGCGUAAUGCGUCUUAUCAGGCC
>URS0000AB632B_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGUUUAUGCCGCAUCCGACAUCAACGCCUGAUGCGACGCUUAACGCGUCUUAUCAGGCC
>URS0000AB7A38_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGACGGAUAAGGCGUUUACGCCGCAUCCGGCAACAGAUGCCUGAUGCGACGCUACCGCGUCUUAUCAGGCC
>URS0000AB7A38_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGACGGAUAAGGCGUUUACGCCGCAUCCGGCAACAGAUGCCUGAUGCGACGCUACCGCGUCUUAUCAGGCC
>URS0000AB8476_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAUCCGAGCACCAUUGCCUGAUGCGACGCUUACCCGUCUUAUCAGGCC
>URS0000AB8A02_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAUUUGAGCAUAGUGCCUGAUGCGACGCUUGAUGCGUCUUAUCAGGCC
>URS0000AB27B2_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCAGAUAAGGCGUUCACGCCGCAUCUGGCAUUUGGCUCUCGAUGCCUGAUGCGACGCUGGCGCGUCUUAUCAUGCC
>URS0000AB2B0A_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAGUCGUGCGCAGAUGCCUGAUGCGACGCUAACGCGUCUUAUCAGGCC
>URS0000AB2B0A_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAGUCGUGCGCAGAUGCCUGAUGCGACGCUAACGCGUCUUAUCAGGCC
>URS0000AB3E28_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGCUCGCGCCGCAUCCGGCGAUGGUGCACUGAAGCCUGAUGCGACGCUUACCGCGUCUUAUCAUGCC
>URS0000AB44D4_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUCCCCGCCGCAUCCGGCACAGGCACCGUGCUGAUGUCUGAUGCGACGCUGGCGCGUCUUAUCAGAC
C
>URS000015AD28_879462 Escherichia coli str. K-12 substr. MG1655star Enterobacterial sRNA STnc450
CGCUAUACUAGCCACUGAAAAUGCCGGUUCACUUUCUUCGAAUCGGCUUUCAAUGUGU
>URS00001BC76C_879462 Escherichia coli str. K-12 substr. MG1655star tp2
GUUAUUCCUUAUCUAUCUAAUAACGUUGAGUUUUCUGGAACCUGUCCCAUUGAACUCUCGCCGGAAAGCUCAAUAAGACA
GGUUCUACGUUUAGUUGCCGCGCUUUUAUAUGCG
>URS0000AB56B0_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGUCGGAUAGGGCGUUCACGCCGCAUCCGGCAGCCGUUGCCUGAUGCGACGCUGUGCGUCUUAUCAGGCC
>URS0000AB56B0_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGUCGGAUAGGGCGUUCACGCCGCAUCCGGCAGCCGUUGCCUGAUGCGACGCUGUGCGUCUUAUCAGGCC
>URS0000AB56D3_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGGCGGAUAAGGCGUUCACGCCGCAUCCGCCAGUGGCGCGGUGCAAUUGCCGGAUGCGACGCUUGCCGCGUCUUAUCCAG
CC
>URS0000AB582B_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GACCGGAAACGGUGUUCACGCCGCAUCCGGCAUUCGGUGCUCAAUGCCUGAUGCGACGCUUACCGCGUCUUAUCAGGCC
>URS0000AB7F4B_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCACUGGUUGCCUGAUGCGACGCUUGCGCGUCUUAUCAGGCC
>URS0000AB801B_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAGUUGGCGCACAAUGCCUGAUGCGACGCUUAACGCGUCUUAUCAUGCC
>URS0000AB889E_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
UGCGGGAUAAGGCGUUUACGCUGCAUCCGGCAUGGAUUGCCUGAUGUGACGCUGGCGCGUCUUAUCAGGUC
>URS0000AB948F_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGACGCAUCCGGCAUUAGGUGCUCAAUGCCUGAUGCGCUACGCUUAUCAGGCC
>URS0000ABA331_316407 Escherichia coli str. K-12 substr. W3110 antisense RNA of dnaA mRNA
UUUGGCAUUCGGCUUGCGCGCCAUAAUGCCGUUACCCACCGCAUGCAGCAGGUGAGUUUUACCCAGACCCGUGCCGCCAU
A
>URS00009FC17C_316407 Escherichia coli str. K-12 substr. W3110 TPP riboswitch (THI element)
CCGUUCUCAACGGGGUGCCACGCGUACGCGUGCGCUGAGAAAAUACCCGUCGAACCUGAUCCGGAUAACGCCGGCGAAGG
GAUUUGAGGCUCCUUCUCAA
>URS0000ABA4F3_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGGUUACGCCGCAUCCGACAUCUAACGCCCAAGCCGGUUGCCUGAUGCGACGCUGGCGCGUCUUAUCA
GGCC
>URS0000A5F9D7_316407 Escherichia coli str. K-12 substr. W3110 Moco (molybdenum cofactor) riboswitch
AUAACCACUAAACACUCUAGCCUCUGCACCUGGGUCAACUGAUACGGUGCUUUGGCCGUGACAAUGCUCGUAAAGAUUGC
CACCAGGGCGAAGGAAGAAAUGACUUCGCCUCCCGUAUCUGGAAAGGUGUACAUGGCUUCACAAC
>URS0000AB47A3_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGACGCAUAGCGUCGCAUCCGACAACCGAUGCCUGAUGCGCCGCUGACGCGACUUAUCAGGCC
>URS0000AB4F2B_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGUUUACGCCGCAUCCGACAUCAAUGCCUGAUGCGACGCUUGCCGCGUCUUAUCAGGCC
>URS0000AB56D3_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGGCGGAUAAGGCGUUCACGCCGCAUCCGCCAGUGGCGCGGUGCAAUUGCCGGAUGCGACGCUUGCCGCGUCUUAUCCAG
CC
>URS0000AB6204_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCUGAUAAGACGCGUUAGCGUCGCAUCAGGCAUCUGCGCACGACUGCCGGAUGCGGCGUAAACGCCUUAUCCGGCC
>URS0000AB632B_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGUUUAUGCCGCAUCCGACAUCAACGCCUGAUGCGACGCUUAACGCGUCUUAUCAGGCC
>URS0000AB6B0E_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GACCGGAUAAGGCGUUCACGCCGCAUCCGGCAGUCGUGCGCCAUGCCUGAUGCGACGCUUUGCGCGUCUUAUCAGGCC
>URS0000AB6B0E_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GACCGGAUAAGGCGUUCACGCCGCAUCCGGCAGUCGUGCGCCAUGCCUGAUGCGACGCUUUGCGCGUCUUAUCAGGCC
>URS00003146CE_316385 Escherichia coli str. K-12 substr. DH10B 6S / SsrS RNA
AUUUCUCUGAGAUGUUCGCAAGCGGGCCAGUCCCCUGAGCCGAUAUUUCAUACCACAAGAAUGUGGCGCUCCGCGGUUGG
UGAGCAUGCUCGGUCCGUCCGAGAAGCCUUAAAACUGCGACGACACAUUCACCUUGAACCAAGGGUUCAAGGGUUACAGC
CUGCGGCGGCAUCUCGGAGAUUCC
>URS0000AB74B3_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGUUGGAUAAGGCGGUUACGCCGCAUCCGACAUCCAACGUCCGAGCCGGUUGCCUGAUGCGACGCUGGCGCGUCUUAUCA
GGCC
>URS0000AB74B3_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGUUGGAUAAGGCGGUUACGCCGCAUCCGACAUCCAACGUCCGAGCCGGUUGCCUGAUGCGACGCUGGCGCGUCUUAUCA
GGCC
>URS0000AB74B3_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGUUGGAUAAGGCGGUUACGCCGCAUCCGACAUCCAACGUCCGAGCCGGUUGCCUGAUGCGACGCUGGCGCGUCUUAUCA
GGCC
>URS0000AB91E6_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
AGCAGGAUGCGGCGUUGACCCCGCAUCCGGCAAUCAACGUCUGAUGCGACGCUUGCGCGUCUUAUCAGACC
>URS0000AB91F4_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGAAUAAGGCGUUCACGCCGCAUCCGGCAAUCAACGCCUGAUGCGACGCUUGCGCGUCUUAUCAGGCC
>URS0000AB91F4_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGAAUAAGGCGUUCACGCCGCAUCCGGCAAUCAACGCCUGAUGCGACGCUUGCGCGUCUUAUCAGGCC
>URS0000ABA9CB_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCAGAUAAGGCAUUUUCGCAGCAUCCGGCACUUAUUGUCGGAUGCGAUGCUUGCGCAUCUUAUCCGACC
>URS0000ABA9CB_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCAGAUAAGGCAUUUUCGCAGCAUCCGGCACUUAUUGUCGGAUGCGAUGCUUGCGCAUCUUAUCCGACC
>URS0000ABBDFE_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGUCGAAUAAGGCGGUCGCGCCGCAUCCGACAAUGGCCGGCACAUUUGCCUGAUGCGACGCUGACGCGUCUUAUCAGGCC
>URS0000ABBDFE_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGUCGAAUAAGGCGGUCGCGCCGCAUCCGACAAUGGCCGGCACAUUUGCCUGAUGCGACGCUGACGCGUCUUAUCAGGCC
>URS0000165C8D_316407 Escherichia coli str. K-12 substr. W3110 Spot 42 RNA
AGUUAGUCGCGUAGGGUACAGAGGUAAGAUGUUCUAUCUUUCAGACCUUUUACUUCACGUAAUCGGAUUUGGCUGAAUAU
UUUAGCCGCCCCAGUCAGUAAUGACUGGGGCGUUUUUUA
>URS0000AB56B0_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGUCGGAUAGGGCGUUCACGCCGCAUCCGGCAGCCGUUGCCUGAUGCGACGCUGUGCGUCUUAUCAGGCC
>URS0000AB6F5E_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAAUGGUGCCGACUGCCUGAUGCGACGCUUGCGCGUCUUAUCAGGCC
>URS0000AB7D18_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGACGUUUACGCCGCAUCCGGCAUUUGUGCGCUGAUGCCUGAUGCGACGCUGACGCGUCUUAUCAUGCC
>URS0000AB8A02_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAUUUGAGCAUAGUGCCUGAUGCGACGCUUGAUGCGUCUUAUCAGGCC
>URS0000AB98DB_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUUCGGCAACCAACGCCUGAUGCGACGCUUGCGCGUCUUAUCAGGCC
>URS0000AB9FFD_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGUUGGAUAAGGCGGUUACGCCGCAUCCAACAUCUAACGCCCGAGCCGGUUGCCUGAUGCGACGCUGGCGCGUCUUAUCA
GCA
>URS0000AB9FFD_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGUUGGAUAAGGCGGUUACGCCGCAUCCAACAUCUAACGCCCGAGCCGGUUGCCUGAUGCGACGCUGGCGCGUCUUAUCA
GCA
>URS0000ABB3EF_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAGUUGGCGCACAAUGCCUGAUGCGACGCUUGUCGCGUCUUAUCAUGCC
>URS0000ABBD9D_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAAUGGUGCUCAACGCCUGAUGCGACGCUGGCGCGUCUUAUCAUGCC
>URS0000ABBD9D_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAAUGGUGCUCAACGCCUGAUGCGACGCUGGCGCGUCUUAUCAUGCC
>URS0000ABBF7E_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCACUUGUGCCGCAUCCGGCAAUCAAUGCCUGAUGCGACGCUGUCGCGUCUUAUCAGGCC
>URS0000ABC701_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCGCGCCGCAUCCGGCAGUUGGCGCACAAUGCCUGAUGCGACGCUUGACGCGUCUUAUCAGGCC
>URS0000ABC701_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCGCGCCGCAUCCGGCAGUUGGCGCACAAUGCCUGAUGCGACGCUUGACGCGUCUUAUCAGGCC
>URS0000ABD407_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGACGGAUAAGGCGUUUACGCCGCAUCCGGCAGUUGUACGCAGGUGCCUGAUGCGACGCUGGCGCGUCUUAUCAUGCC
>URS0000ABD407_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGACGGAUAAGGCGUUUACGCCGCAUCCGGCAGUUGUACGCAGGUGCCUGAUGCGACGCUGGCGCGUCUUAUCAUGCC
>URS0000AB3A04_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUAACGCCGCAUCCGGCAAUGGUGAACGAUGCCUGAUGCGACGCUCACGCGUCUUAUCAGGCC
>URS0000AB594D_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAAUUGGUGCAUGAUGCCUGAUGCGACGCUGGCGCGUCUUAUCAGGCC
>URS0000AB594D_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAAUUGGUGCAUGAUGCCUGAUGCGACGCUGGCGCGUCUUAUCAGGCC
>URS0000AB6F5E_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAAUGGUGCCGACUGCCUGAUGCGACGCUUGCGCGUCUUAUCAGGCC
>URS0000AB91A0_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCUGAUAAGACGCGGCAGCGUCGCAUCAGGCAUUGUGCACGAUUGCCGGAUGCGGCGUGAACGCCUUAUCCGGCC
>URS0000AB98DB_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUUCGGCAACCAACGCCUGAUGCGACGCUUGCGCGUCUUAUCAGGCC
>URS0000ABA73A_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCUGAUAAGACGCGUGAGCGUCGCAUCAGGCAUCGUUCACCAUUGCCGGAUGCGGCGUUAACGCCUUAUCCGGCC
>URS0000ABAD4F_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCAGGCAUCUGAGCAUGAUGCCUGAUGCGGCGCUGGUCGCGUCUUAUCAGGCC
>URS0000ABB7E7_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGACGGAUAAGGCGUUUACGCUGCAUCCGGCAACCUAUGCCUGAUGCGACGCUGAAGCGUCUUAUCAUGCC
>URS0000ABB7E7_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGACGGAUAAGGCGUUUACGCUGCAUCCGGCAACCUAUGCCUGAUGCGACGCUGAAGCGUCUUAUCAUGCC
>URS0000ABB971_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAACAGUGCCAACUGCCUGAUGCGACGCUUGCGCGUCUUAUCAGGCC
>URS0000ABD328_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGUCAGACAAGGCGGUCACGCCGCAUCCGACAUCCAACGCCCGAGCCGGUUGCCUGAUGCGACGCUGGCGCGUCUUAUCA
GGCC
>URS0000ABD407_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGACGGAUAAGGCGUUUACGCCGCAUCCGGCAGUUGUACGCAGGUGCCUGAUGCGACGCUGGCGCGUCUUAUCAUGCC
>URS0000133A43_316407 Escherichia coli str. K-12 substr. W3110 Fumarate/nitrate reductase regulator sRNA
GCAGGUGAAUGCAACGUCAAGCGAUGGGCGUUGCGCUCCAUAUUGUCUUACUUCCUUUUUUGAAUUACUGCAUAGCACAA
UUGAUUCGUACGACGCCGACUUUGAUGAGUCGGCUUUU
>URS0000199749_879462 Escherichia coli str. K-12 substr. MG1655star SgrS RNA
GAUGAAGCAAGGGGGUGCCCCAUGCGUCAGUUUUAUCAGCACUAUUUUACCGCGACAGCGAAGUUGUGCUGGUUGCGUUG
GUUAAGCGUCCCACAACGAUUAACCAUGCUUGAAGGACUGAUGCAGUGGGAUGACCGCAAUUCUGAAAGUUGACUUGCCU
GCAUCAUGUGUGACUGAGUAUUGGUGUAAAAUCACCCGCCAGCAGAUUAUACCUGCUGGUUUUUUUU
>URS0000AB410E_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGUUCACGCCGCAUCCGACAUUUGCACAAGAUGCCUGAUGCGACGCUGUCCGCGUCUUAUCAGGCC
>URS0000AB43B1_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAACAGGAGCCAAAUGCCGGAUGCAACGCUGGCGCGUUUUAUCCGGCC
>URS0000AB4F2B_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGUUUACGCCGCAUCCGACAUCAAUGCCUGAUGCGACGCUUGCCGCGUCUUAUCAGGCC
>URS0000AB4F2B_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGUUUACGCCGCAUCCGACAUCAAUGCCUGAUGCGACGCUUGCCGCGUCUUAUCAGGCC
>URS0000AB6266_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAAUAAGUGCUCCGAUGCCUGAUGCGACGCUUGCCGCGUCUUAUCAGGCC
>URS0000AB6266_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAAUAAGUGCUCCGAUGCCUGAUGCGACGCUUGCCGCGUCUUAUCAGGCC
>URS0000AB801B_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAGUUGGCGCACAAUGCCUGAUGCGACGCUUAACGCGUCUUAUCAUGCC
>URS0000AB801B_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAGUUGGCGCACAAUGCCUGAUGCGACGCUUAACGCGUCUUAUCAUGCC
>URS0000AB8461_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAAUGGUGACAAAUGCCUGAUGCGCUACGCUUAUCAGGCC
>URS0000AB91E6_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
AGCAGGAUGCGGCGUUGACCCCGCAUCCGGCAAUCAACGUCUGAUGCGACGCUUGCGCGUCUUAUCAGACC
>URS0000AB9C6F_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCAGGAUAAGGCGUUUACGCCGCAUCCGGCAUUUGAGCAGGAUGCCUGAUGCGACGCUGAUAGCGUCUUAUCAGGCC
>URS0000AB9CE8_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGCUCGCGUCGCAUCCGACACCAUGCUCAGAUGCCUGAUGCGACGCUGACGCGUCUUAUCAGGCC
>URS0000AB9CE8_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGCUCGCGUCGCAUCCGACACCAUGCUCAGAUGCCUGAUGCGACGCUGACGCGUCUUAUCAGGCC
>URS0000ABA9CB_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCAGAUAAGGCAUUUUCGCAGCAUCCGGCACUUAUUGUCGGAUGCGAUGCUUGCGCAUCUUAUCCGACC
>URS00002B6EFE_316407 Escherichia coli str. K-12 substr. W3110 Short Intergenic Abundant RNA
UUGACGCUGUUGUUUUUUCAACCUAGAGUAAAGGAACAAGGGUAAGGGAGGAUUUCUCCCCCCUCUGAUGAGUUGUUAGU
AAGUCGGGAAACUUAACAGUAACAACACAACCAGUAUGAUGACGAGCUUCAUCAUAACCCUUUCCUUAUA
>URS0000ABB289_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAACCGAUGCCUGAUGCGACGCGGUCGCGUCUUAUCAGGCC
>URS0000ABBDFE_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGUCGAAUAAGGCGGUCGCGCCGCAUCCGACAAUGGCCGGCACAUUUGCCUGAUGCGACGCUGACGCGUCUUAUCAGGCC
>URS0000ABCA31_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGCUCGCGCCGCAUCCGGCAAUCAAUGCCUGAUGCGACGCUGUCGCGUCUUAUCAGGCC
>URS0000ABCA31_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGCUCGCGCCGCAUCCGGCAAUCAAUGCCUGAUGCGACGCUGUCGCGUCUUAUCAGGCC
>URS0000225C84_879462 Escherichia coli str. K-12 substr. MG1655star IS061 RNA
GCGGCUAUCUGCAAAGUUAAAACUGCAUAAAAAAAUAGAGUCUGUCGACAUCCGCCAGACUCUACAGUACACACAGCAGU
GCAUCCGCGUCUUAAAUCCGGCAUUGUCUCCUCUGCGCCGGUGACUGUGUUAUAACGGUUUUAACCUUUAGUUGCCAAUU
UUCUUCAGUGACAGAUUUCA
>URS0000AB3A04_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUAACGCCGCAUCCGGCAAUGGUGAACGAUGCCUGAUGCGACGCUCACGCGUCUUAUCAGGCC
>URS00001BC76C_316385 Escherichia coli str. K-12 substr. DH10B tp2
GUUAUUCCUUAUCUAUCUAAUAACGUUGAGUUUUCUGGAACCUGUCCCAUUGAACUCUCGCCGGAAAGCUCAAUAAGACA
GGUUCUACGUUUAGUUGCCGCGCUUUUAUAUGCG
>URS0000AB5988_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCUGAUAAGGCACUUGUGCCGCAUCCGGCAAUCAAUGCCUGAUGCGACGCUGUCGCGUCUUAUCAGGCC
>URS0000AB5988_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCUGAUAAGGCACUUGUGCCGCAUCCGGCAAUCAAUGCCUGAUGCGACGCUGUCGCGUCUUAUCAGGCC
>URS0000AB5988_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCUGAUAAGGCACUUGUGCCGCAUCCGGCAAUCAAUGCCUGAUGCGACGCUGUCGCGUCUUAUCAGGCC
>URS0000AB59D1_83333 Escherichia coli K-12 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCGCAUCCGGCACUGGUUGCCUGAUGCGACGCUUGCGCGUCUUAUCAGGCC
>URS0000AB5A22_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
AGCCGGAUAAGGCGCUCGCGCCGCAUCCGGCAACGGUGCCAGAUGCCUGAUGCGACGCUUGCGCGUCUUAUCAGGCC
>URS0000AB5A22_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
AGCCGGAUAAGGCGCUCGCGCCGCAUCCGGCAACGGUGCCAGAUGCCUGAUGCGACGCUUGCGCGUCUUAUCAGGCC
>URS0000AB5F40_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAACGGUGCCGACUGCCUGAUGCGACGCUUGCGCGUCUUAUCAGGCC
>URS0000AB61FF_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGUUCACGCCGCAUCCGACAGCCGUUGCCUGAUGCGACGCGUAAUGCGUCUUAUCAGGCC
>URS0000AB632B_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGUUUAUGCCGCAUCCGACAUCAACGCCUGAUGCGACGCUUAACGCGUCUUAUCAGGCC
>URS0000AB77D3_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCUGAUAAGACGCGUUAGCGUCGCAUCAGGCAUCUGCGCACGACUGCCGGAUGCGGCGUGAACGCCUUAUCCGGCC
>URS0000AB77D3_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCUGAUAAGACGCGUUAGCGUCGCAUCAGGCAUCUGCGCACGACUGCCGGAUGCGGCGUGAACGCCUUAUCCGGCC
>URS0000AB7A38_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGACGGAUAAGGCGUUUACGCCGCAUCCGGCAACAGAUGCCUGAUGCGACGCUACCGCGUCUUAUCAGGCC
>URS0000AB7D18_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGACGUUUACGCCGCAUCCGGCAUUUGUGCGCUGAUGCCUGAUGCGACGCUGACGCGUCUUAUCAUGCC
>URS0000AB7D18_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGACGUUUACGCCGCAUCCGGCAUUUGUGCGCUGAUGCCUGAUGCGACGCUGACGCGUCUUAUCAUGCC
>URS0000AB948F_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGACGCAUCCGGCAUUAGGUGCUCAAUGCCUGAUGCGCUACGCUUAUCAGGCC
>URS0000AB9C6F_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCAGGAUAAGGCGUUUACGCCGCAUCCGGCAUUUGAGCAGGAUGCCUGAUGCGACGCUGAUAGCGUCUUAUCAGGCC
>URS0000ABA331_316385 Escherichia coli str. K-12 substr. DH10B antisense RNA of dnaA mRNA
UUUGGCAUUCGGCUUGCGCGCCAUAAUGCCGUUACCCACCGCAUGCAGCAGGUGAGUUUUACCCAGACCCGUGCCGCCAU
A
>URS00009FC17C_879462 Escherichia coli str. K-12 substr. MG1655star TPP riboswitch (THI element)
CCGUUCUCAACGGGGUGCCACGCGUACGCGUGCGCUGAGAAAAUACCCGUCGAACCUGAUCCGGAUAACGCCGGCGAAGG
GAUUUGAGGCUCCUUCUCAA
>URS0000ABAC3B_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGUUUACGCCGCAUCCGGCAGCCGUUGCCUGAUGCGACGCUGUGCGUCUUAUCAGGCC
>URS0000ABB848_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCUGAUAAGACGGGUAAGCGUCGCAUCAGGCAAUGGUGCUCGGAUGCCGGAUGCGGCGUGAACGCCUUAUCCGGCC
>URS0000133A43_316385 Escherichia coli str. K-12 substr. DH10B Fumarate/nitrate reductase regulator sRNA
GCAGGUGAAUGCAACGUCAAGCGAUGGGCGUUGCGCUCCAUAUUGUCUUACUUCCUUUUUUGAAUUACUGCAUAGCACAA
UUGAUUCGUACGACGCCGACUUUGAUGAGUCGGCUUUU
>URS000068CACC_879462 Escherichia coli str. K-12 substr. MG1655star Enterobacterial sRNA STnc480
UUACAAAAAAAGCCACGGUAUAAACCGUGGCAAAAUCCAACAUAGCUAAAAAUAAUCAGGCGAGUGG
>URS000068CACC_316385 Escherichia coli str. K-12 substr. DH10B Enterobacterial sRNA STnc480
UUACAAAAAAAGCCACGGUAUAAACCGUGGCAAAAUCCAACAUAGCUAAAAAUAAUCAGGCGAGUGG
>URS0000632063_316407 Escherichia coli str. K-12 substr. W3110 Staphylococcus sRNA sau-50
CAAAUGCCGGUACGUUAGCUGCGGCAAUUUUGAUUUCUUUACCGGUCUGCGGGUUGCGGCCAGUACGCUCAGCGCGGUGG
UUCACUUUGAAGGUACCGAAACCAACCAGUUGUACAGCAUCGCCUUCUUUCAGAGACUCAGUAAUUGCAGCC
>URS000040613E_879462 Escherichia coli str. K-12 substr. MG1655star Short Intergenic Abundant RNA
UUGACAAUCUUAUCGUGAAGGCAUACUUUCAGGAGUGAGGGUAGAGCGGGGUUUCCCCCGCCCUGGUAGUCUUAGUAAGC
GGGGAAGCUUAUGACUAAGAGCACCACGAUGAUGAGUAGCUUCAUCAUGACCCUUUCCUUAUU
>URS0000699735_316407 Escherichia coli str. K-12 substr. W3110 Salmonella enterica Typhi npcRNA 44
CUUUAAAAAUCUGGAUCAAGCUGAAAAUUGAAACACUGAACAACGAAAGUUGUUCGUGAGUCUCUCAAAUUUUCGCAACU
CUGAAGUGAAACAUCUUCGG
>URS0000699735_879462 Escherichia coli str. K-12 substr. MG1655star Salmonella enterica Typhi npcRNA 44
CUUUAAAAAUCUGGAUCAAGCUGAAAAUUGAAACACUGAACAACGAAAGUUGUUCGUGAGUCUCUCAAAUUUUCGCAACU
CUGAAGUGAAACAUCUUCGG
>URS0000699735_316385 Escherichia coli str. K-12 substr. DH10B Salmonella enterica Typhi npcRNA 44
CUUUAAAAAUCUGGAUCAAGCUGAAAAUUGAAACACUGAACAACGAAAGUUGUUCGUGAGUCUCUCAAAUUUUCGCAACU
CUGAAGUGAAACAUCUUCGG
>URS00006D7E9B_879462 Escherichia coli str. K-12 substr. MG1655star tpke11
AACGGGUAAUUAUACUGACACGGGCGAAGGGGAAUUUCCUCUCCGCCCGUGCAUUCAUCUAGGGGCAAUUUAAAAAAG
>URS00004E002C_316385 Escherichia coli str. K-12 substr. DH10B GlmZ RNA activator of glmS mRNA
GUAGAUGCUCAUUCCAUCUCUUAUGUUCGCCUUAGUGCCUCAUAAACUCCGGAAUGACGCAGAGCCGUUUACGGUGCUUA
UCGUCCACUGACAGAUGUCGCUUAUGCCUCAUCAGACACCAUGGACACAACGUUGAGUGAAGCACCCACUUGUUGUCAUA
CAGACCUGUUUUAACGCCUGCUCCGUAAUAAGAGCAGGCGUUUUUUU
>URS00005E5D9E_879462 Escherichia coli str. K-12 substr. MG1655star CsrC RNA family
AUAGAGCGAGGACGCUAACAGGAACAAUGACUCAGGAUGAGGGUCAGGAGCGCCAGGAGGCGAAGACAGAGGAUUGUCAG
GAAGACAAACGUCCGGAGACGUAAUUAAACGGAAAUGGAAUCAACACGGAUUGUUCCGGCUAAAGGAAAAACAGGGUGUG
UUGGCGGCCUGCAAGGAUUGUAAGACCCGUUAAGGGUUAUGAGUCAGGAAAAAAGGCGACAGAGUAAUCUGUCGCCUUUU
UUCUUUGCUUGCUU
>URS00005E5D9E_316385 Escherichia coli str. K-12 substr. DH10B CsrC RNA family
AUAGAGCGAGGACGCUAACAGGAACAAUGACUCAGGAUGAGGGUCAGGAGCGCCAGGAGGCGAAGACAGAGGAUUGUCAG
GAAGACAAACGUCCGGAGACGUAAUUAAACGGAAAUGGAAUCAACACGGAUUGUUCCGGCUAAAGGAAAAACAGGGUGUG
UUGGCGGCCUGCAAGGAUUGUAAGACCCGUUAAGGGUUAUGAGUCAGGAAAAAAGGCGACAGAGUAAUCUGUCGCCUUUU
UUCUUUGCUUGCUU
>URS00003B72FE_316407 Escherichia coli str. K-12 substr. W3110 Magnesium Sensor
CUUACCGGAGGUUAUAUGGAACCUGAUCCCACGCCUCUCCCUCGACGGAGAUUAAAACUUUUCCGGUAAGCCCGUCUUUU
CACGGCGUUACCGGAUGCGUAAGGCCGUGACGUUUU
>URS000043222F_879462 Escherichia coli str. K-12 substr. MG1655star SraB RNA
UAGGCAUAUUUUUUUCCAUCAGAUAUAGCGUAUUGAUGAUAGCCAUUUUAAACUAUGCGCUUCGUUUUGCAGGUUGAUGU
UUGUUAUCAGCACUGAACGAAAAUAAAGCAGUAACCCGCAAUGUGUGCGAAUUAUUGGCAAAAGGCAACCACAGGCUGCC
UUUUUCUUU
>URS00006A201E_879462 Escherichia coli str. K-12 substr. MG1655star Salmonella enterica Typhi npcRNA 44
CUUUAAAAAUCUGGAUCAAGCUGAAAAUUGAAACACUGAACAAUGAAAGUUGUUCGUGAGUCUCUCAAAUUUUCGCAACU
CUGAAGUGAAACAUCUUCGG
>URS00006D66D1_316407 Escherichia coli str. K-12 substr. W3110 Salmonella enterica sRNA STnc40
GCAGUGCCAUGGCCGCCUGCAAUAAAAGCUAACUGUUGAAGUAAAAGGCGCAGGAUUCUGCGCCUUUUUU
>URS00006D66D1_879462 Escherichia coli str. K-12 substr. MG1655star Salmonella enterica sRNA STnc40
GCAGUGCCAUGGCCGCCUGCAAUAAAAGCUAACUGUUGAAGUAAAAGGCGCAGGAUUCUGCGCCUUUUUU
>URS00003A8C6B_879462 Escherichia coli str. K-12 substr. MG1655star Pseudomonas sRNA P26
ACCCUUCCGGUUGCAGCCUGAGAAAUCAGGCUGAUGGCUGGUGACUUUUUAGUCACCAGCCU
>URS00003A8C6B_316385 Escherichia coli str. K-12 substr. DH10B Pseudomonas sRNA P26
ACCCUUCCGGUUGCAGCCUGAGAAAUCAGGCUGAUGGCUGGUGACUUUUUAGUCACCAGCCU
>URS000039A860_316385 Escherichia coli str. K-12 substr. DH10B RprA RNA
ACGGUUAUAAAUCAACAUAUUGAUUUAUAAGCAUGGAAAUCCCCUGAGUGAAACAACGAAUUGCUGUGUGUAGUCUUUGC
CCAUCUCCCACGAUGGGCUUUUUUUUAA
>URS00006C2A48_316407 Escherichia coli str. K-12 substr. W3110 istR Hfq binding RNA
CGUCAAAAUUCGUGCCGAAAUUGCGCGUUCUGCGCGGAACACGUAUACUUUCAGUGUUGACAUAAUACAGUGUGCUUUGC
GGUUACCAGCCGCAGGCGACUGACGAAACCUCGCUCCGGCGGGGUUUUUU
>URS00006C2A48_879462 Escherichia coli str. K-12 substr. MG1655star istR Hfq binding RNA
CGUCAAAAUUCGUGCCGAAAUUGCGCGUUCUGCGCGGAACACGUAUACUUUCAGUGUUGACAUAAUACAGUGUGCUUUGC
GGUUACCAGCCGCAGGCGACUGACGAAACCUCGCUCCGGCGGGGUUUUUU
>URS000039E69D_316407 Escherichia coli str. K-12 substr. W3110 TPP riboswitch (THI element)
CCAAACGACUCGGGGUGCCCUUCUGCGUGAAGGCUGAGAAAUACCCGUAUCACCUGAUCUGGAUAAUGCCAGCGUAGGGA
AGUCACGGACCACCAGG
>URS0000696027_879462 Escherichia coli str. K-12 substr. MG1655star Enterobacterial sRNA STnc550
UCCAUUUCACUCCAGACCCUAACUUCAGCUCCUGCAAAAUCGCAAGGUAAACGUUUGCCUUUACACACCUUACGCACAAC
AAAAGUGUUGCGGUACGCCGGAAAAACGACACGGAGCGUCAGGAAGGGGUCAAUGGCCAGUACGCAAAUAGUGUAAGCGU
GGAAUUUUGGCCGAUCUUGACGAAAAGGGGAAGUGGUAAAAACACUUAUCAUUAUAAAUGACGGGAGAUUUUUUCAUCAC
AGUGUGUAAAAAUGCGUAAUAUCACUUUUUGUGUGGUAAUAAAAAAGGAGAAAACUUGAUGAGCACCGACCUUAAAUUUU
CACUGGUAACAACGAUUAUCGUCCUCGGUUUGAUCGUAGCCGUGGGUUUGACUGCCGCGCUGCACUGAUUU
>URS00003AB795_316385 Escherichia coli str. K-12 substr. DH10B GadY
CUUACUGAGAGCACAAAGUUUCCCGUGCCAACAGGGAGUGUUAUAACGGUUUAUUAGUCUGGAGACGGCAGACUAUCCUC
UUCCCGGUCCCCUAUGCCGGGUUUUUUUUAUGUC
>URS00005E2A61_316407 Escherichia coli str. K-12 substr. W3110 sroE RNA
AUAACGUGAUGGGAAGCGCCUCGCUUCCCGUGUAUGAUUGAACCCGCAUGGCUCCCGAAACAUUGAGGGAAGCGUUGAGG
GUUCAUUUUUAU
>URS00005E5D9E_316407 Escherichia coli str. K-12 substr. W3110 CsrC RNA family
AUAGAGCGAGGACGCUAACAGGAACAAUGACUCAGGAUGAGGGUCAGGAGCGCCAGGAGGCGAAGACAGAGGAUUGUCAG
GAAGACAAACGUCCGGAGACGUAAUUAAACGGAAAUGGAAUCAACACGGAUUGUUCCGGCUAAAGGAAAAACAGGGUGUG
UUGGCGGCCUGCAAGGAUUGUAAGACCCGUUAAGGGUUAUGAGUCAGGAAAAAAGGCGACAGAGUAAUCUGUCGCCUUUU
UUCUUUGCUUGCUU
>URS00003B72FE_879462 Escherichia coli str. K-12 substr. MG1655star Magnesium Sensor
CUUACCGGAGGUUAUAUGGAACCUGAUCCCACGCCUCUCCCUCGACGGAGAUUAAAACUUUUCCGGUAAGCCCGUCUUUU
CACGGCGUUACCGGAUGCGUAAGGCCGUGACGUUUU
>URS00003B72FE_316385 Escherichia coli str. K-12 substr. DH10B Magnesium Sensor
CUUACCGGAGGUUAUAUGGAACCUGAUCCCACGCCUCUCCCUCGACGGAGAUUAAAACUUUUCCGGUAAGCCCGUCUUUU
CACGGCGUUACCGGAUGCGUAAGGCCGUGACGUUUU
>URS0000AB240B_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAAUUGGUGCAUGAUGCCUGAUGCGACGCUGUCGCGUCUUAUCGUGCC
>URS0000AB240B_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAAUUGGUGCAUGAUGCCUGAUGCGACGCUGUCGCGUCUUAUCGUGCC
>URS0000AB240B_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAAUUGGUGCAUGAUGCCUGAUGCGACGCUGUCGCGUCUUAUCGUGCC
>URS0000AB27B2_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCAGAUAAGGCGUUCACGCCGCAUCUGGCAUUUGGCUCUCGAUGCCUGAUGCGACGCUGGCGCGUCUUAUCAUGCC
>URS00001BC76C_316407 Escherichia coli str. K-12 substr. W3110 tp2
GUUAUUCCUUAUCUAUCUAAUAACGUUGAGUUUUCUGGAACCUGUCCCAUUGAACUCUCGCCGGAAAGCUCAAUAAGACA
GGUUCUACGUUUAGUUGCCGCGCUUUUAUAUGCG
>URS0000AB5767_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGUUUACGCCGCAUCCGACAGCCGUUGCCUGAUGCGACGCUGUGCGUCUUAUCAGGCC
>URS0000AB5767_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGUUUACGCCGCAUCCGACAGCCGUUGCCUGAUGCGACGCUGUGCGUCUUAUCAGGCC
>URS0000AB5767_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGUUUACGCCGCAUCCGACAGCCGUUGCCUGAUGCGACGCUGUGCGUCUUAUCAGGCC
>URS0000ABB901_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAAUCGGUGCACGAUGCCUGAUGCGACGCUUGCGCGUCUUAUCAUGCC
>URS0000ABBDC6_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCUGCAUCCGGCACCCGGAGCCUGAUGCGACGCUGGCGCGUCUUAUCAGGCC
>URS0000165C8D_316385 Escherichia coli str. K-12 substr. DH10B Spot 42 RNA
AGUUAGUCGCGUAGGGUACAGAGGUAAGAUGUUCUAUCUUUCAGACCUUUUACUUCACGUAAUCGGAUUUGGCUGAAUAU
UUUAGCCGCCCCAGUCAGUAAUGACUGGGGCGUUUUUUA
>URS0000237957_879462 Escherichia coli str. K-12 substr. MG1655star DsrA RNA
AACACAUCAGAUUUCCUGGUGUAACGAAUUUUUUAAGUGCUUCUUGCUUAAGCAAGUUUCAUCCCGACCCCCUCAGGGUC
GGGAUUU
>URS00007035AF_316385 Escherichia coli str. K-12 substr. DH10B Salmonella enterica Typhi npcRNA 44
CUUUAAAAAUCUGGAUCAAGCUGAAAAUUGAAACACUGAACAACGAAAGUUGUUCGUGAGUCUCUCAAAUUUUCGCAACA
CGAUGAUGAAUCGUAAGAAACAUCUUCGG
>URS000053ACE7_316385 Escherichia coli str. K-12 substr. DH10B sroD RNA
UUACGUGACGAAGCGCGCGGCAAAGUGGACAAUAAAGCCUGAGCGUUAAGUCAGUCGUCAGACGCCGGUUAAUCCGGCGU
UUUUUU
>URS00006DA791_316407 Escherichia coli str. K-12 substr. W3110 OrzO-P RNA antitoxin family
CACGAUGUUGCACAGGCUGUGGUGUUAGGCCUGAAAAUAGUAAAUAAAAGAACCUGCCUCACCAGCAGGUUUUUUU
>URS00006DA791_316385 Escherichia coli str. K-12 substr. DH10B OrzO-P RNA antitoxin family
CACGAUGUUGCACAGGCUGUGGUGUUAGGCCUGAAAAUAGUAAAUAAAAGAACCUGCCUCACCAGCAGGUUUUUUU
>URS0000454386_879462 Escherichia coli str. K-12 substr. MG1655star t44 RNA
CUCACUUUGUGUAACAACACACACGUAUCGGCACAUAUUCCGGGGUGCCCUUUGGGGUCGGUAAUAUGGGAUACGUGGAG
GCAUAAC
>URS00003A8C6B_316407 Escherichia coli str. K-12 substr. W3110 Pseudomonas sRNA P26
ACCCUUCCGGUUGCAGCCUGAGAAAUCAGGCUGAUGGCUGGUGACUUUUUAGUCACCAGCCU
>URS00006A201E_316407 Escherichia coli str. K-12 substr. W3110 Salmonella enterica Typhi npcRNA 44
CUUUAAAAAUCUGGAUCAAGCUGAAAAUUGAAACACUGAACAAUGAAAGUUGUUCGUGAGUCUCUCAAAUUUUCGCAACU
CUGAAGUGAAACAUCUUCGG
>URS00006661D3_316407 Escherichia coli str. K-12 substr. W3110 Staphylococcus sRNA sau-50
GGAAGCUCGGUACUUUAGCAGCAGCGAUGGUGAUCUCUUUACCGGUCUGCGGGUUGCGGCCAGUACGGGCAGCACGCUCU
UUAACGGCAAAAGUACCAAAACCUACCAGUGCUACAUCAUCCCCUUCUUUCAGAGAUUCAGUUAC
>URS00006661D3_879462 Escherichia coli str. K-12 substr. MG1655star Staphylococcus sRNA sau-50
GGAAGCUCGGUACUUUAGCAGCAGCGAUGGUGAUCUCUUUACCGGUCUGCGGGUUGCGGCCAGUACGGGCAGCACGCUCU
UUAACGGCAAAAGUACCAAAACCUACCAGUGCUACAUCAUCCCCUUCUUUCAGAGAUUCAGUUAC
>URS00006661D3_316385 Escherichia coli str. K-12 substr. DH10B Staphylococcus sRNA sau-50
GGAAGCUCGGUACUUUAGCAGCAGCGAUGGUGAUCUCUUUACCGGUCUGCGGGUUGCGGCCAGUACGGGCAGCACGCUCU
UUAACGGCAAAAGUACCAAAACCUACCAGUGCUACAUCAUCCCCUUCUUUCAGAGAUUCAGUUAC
>URS0000668254_316407 Escherichia coli str. K-12 substr. W3110 rydB RNA
GCCCCUUCAAGAGCUAAGCCACUGAGAGUGCCGGAGAUAAGCGCCGGAUGGGGUAGAAACC
>URS0000668254_879462 Escherichia coli str. K-12 substr. MG1655star rydB RNA
GCCCCUUCAAGAGCUAAGCCACUGAGAGUGCCGGAGAUAAGCGCCGGAUGGGGUAGAAACC
>URS0000668254_316385 Escherichia coli str. K-12 substr. DH10B rydB RNA
GCCCCUUCAAGAGCUAAGCCACUGAGAGUGCCGGAGAUAAGCGCCGGAUGGGGUAGAAACC
>URS000067BEF6_316407 Escherichia coli str. K-12 substr. W3110 Enterobacterial sRNA STnc180
GCUUUUAAUACACCGCAGCAAUAACAGCUUGAGUUAUCUCAACACAAAAUAAUAACCGUUAAGGGUGUAGCCUAUGAUCA
ACACAAAUAUGAAAUAUUGGUCCUGGAUGGGCGCGUUUUCUCUGUCGAUGCUCUUCUGGGCCGAACUCCUCUGGAUCAUU
ACUCACUGAUCCUUGACCCCGCUGCGGCGGGGUUGUCAUUUGC
>URS000067BEF6_879462 Escherichia coli str. K-12 substr. MG1655star Enterobacterial sRNA STnc180
GCUUUUAAUACACCGCAGCAAUAACAGCUUGAGUUAUCUCAACACAAAAUAAUAACCGUUAAGGGUGUAGCCUAUGAUCA
ACACAAAUAUGAAAUAUUGGUCCUGGAUGGGCGCGUUUUCUCUGUCGAUGCUCUUCUGGGCCGAACUCCUCUGGAUCAUU
ACUCACUGAUCCUUGACCCCGCUGCGGCGGGGUUGUCAUUUGC
>URS000067BEF6_316385 Escherichia coli str. K-12 substr. DH10B Enterobacterial sRNA STnc180
GCUUUUAAUACACCGCAGCAAUAACAGCUUGAGUUAUCUCAACACAAAAUAAUAACCGUUAAGGGUGUAGCCUAUGAUCA
ACACAAAUAUGAAAUAUUGGUCCUGGAUGGGCGCGUUUUCUCUGUCGAUGCUCUUCUGGGCCGAACUCCUCUGGAUCAUU
ACUCACUGAUCCUUGACCCCGCUGCGGCGGGGUUGUCAUUUGC
>URS00006DA5E8_316385 Escherichia coli str. K-12 substr. DH10B Enterobacterial sRNA STnc240
CCCAUUUAGGCACAAUGCGCCGCUGUCAAAAAAUGACUAAAAACCGACGUUUCAUCAGCGUCGGUUAUUUUUUGC
>URS00005E2A61_879462 Escherichia coli str. K-12 substr. MG1655star sroE RNA
AUAACGUGAUGGGAAGCGCCUCGCUUCCCGUGUAUGAUUGAACCCGCAUGGCUCCCGAAACAUUGAGGGAAGCGUUGAGG
GUUCAUUUUUAU
>URS00004E5F89_879462 Escherichia coli str. K-12 substr. MG1655star Short Intergenic Abundant RNA
UUGACACUAAGGGCGGAGUGACAUAAUUUCAGGAGUGAGGGUUAGGGAGAGGUUUCCCCCUCCCCCUGGUGUUCUUAGUA
AGCCUGGAAGCUAAUCACUAAGAGUAUCACCAGUAUGAUGACGUGCUUCAUCAUAACCCUUUCCUUAUU
>URS00004F2222_879462 Escherichia coli str. K-12 substr. MG1655star Short Intergenic Abundant RNA
UUGACAUCGUUGAUUCUUUGACCUAAUUUAGUGAGUAAGGGUAAGGGAGGAUUGCUCCUCCCCUGAGACUGACUGUUAAU
AAGCGCUGAAACUUAUGAGUAACAGUACAAUCAGUAUGAUGACAAGUCGCAUCAUAACCCUUCUCCUUCAA
>URS00004A6236_879462 Escherichia coli str. K-12 substr. MG1655star MicA sRNA
GAAAGACGCGCAUUUGUUAUCAUCAUCCCUGAAUUCAGAGAUGAAAUUUUGGCCACUCACGAGUGGCCUUUU
>URS00006D66D1_316385 Escherichia coli str. K-12 substr. DH10B Salmonella enterica sRNA STnc40
GCAGUGCCAUGGCCGCCUGCAAUAAAAGCUAACUGUUGAAGUAAAAGGCGCAGGAUUCUGCGCCUUUUUU
>URS00006D7E9B_316407 Escherichia coli str. K-12 substr. W3110 tpke11
AACGGGUAAUUAUACUGACACGGGCGAAGGGGAAUUUCCUCUCCGCCCGUGCAUUCAUCUAGGGGCAAUUUAAAAAAG
>URS00003AB795_316407 Escherichia coli str. K-12 substr. W3110 GadY
CUUACUGAGAGCACAAAGUUUCCCGUGCCAACAGGGAGUGUUAUAACGGUUUAUUAGUCUGGAGACGGCAGACUAUCCUC
UUCCCGGUCCCCUAUGCCGGGUUUUUUUUAUGUC
>URS00003AB795_879462 Escherichia coli str. K-12 substr. MG1655star GadY
CUUACUGAGAGCACAAAGUUUCCCGUGCCAACAGGGAGUGUUAUAACGGUUUAUUAGUCUGGAGACGGCAGACUAUCCUC
UUCCCGGUCCCCUAUGCCGGGUUUUUUUUAUGUC
>URS00004E002C_316407 Escherichia coli str. K-12 substr. W3110 GlmZ RNA activator of glmS mRNA
GUAGAUGCUCAUUCCAUCUCUUAUGUUCGCCUUAGUGCCUCAUAAACUCCGGAAUGACGCAGAGCCGUUUACGGUGCUUA
UCGUCCACUGACAGAUGUCGCUUAUGCCUCAUCAGACACCAUGGACACAACGUUGAGUGAAGCACCCACUUGUUGUCAUA
CAGACCUGUUUUAACGCCUGCUCCGUAAUAAGAGCAGGCGUUUUUUU
>URS00004E002C_879462 Escherichia coli str. K-12 substr. MG1655star GlmZ RNA activator of glmS mRNA
GUAGAUGCUCAUUCCAUCUCUUAUGUUCGCCUUAGUGCCUCAUAAACUCCGGAAUGACGCAGAGCCGUUUACGGUGCUUA
UCGUCCACUGACAGAUGUCGCUUAUGCCUCAUCAGACACCAUGGACACAACGUUGAGUGAAGCACCCACUUGUUGUCAUA
CAGACCUGUUUUAACGCCUGCUCCGUAAUAAGAGCAGGCGUUUUUUU
>URS00006DA5E8_316407 Escherichia coli str. K-12 substr. W3110 Enterobacterial sRNA STnc240
CCCAUUUAGGCACAAUGCGCCGCUGUCAAAAAAUGACUAAAAACCGACGUUUCAUCAGCGUCGGUUAUUUUUUGC
>URS00006DA5E8_879462 Escherichia coli str. K-12 substr. MG1655star Enterobacterial sRNA STnc240
CCCAUUUAGGCACAAUGCGCCGCUGUCAAAAAAUGACUAAAAACCGACGUUUCAUCAGCGUCGGUUAUUUUUUGC
>URS00006DA791_879462 Escherichia coli str. K-12 substr. MG1655star OrzO-P RNA antitoxin family
CACGAUGUUGCACAGGCUGUGGUGUUAGGCCUGAAAAUAGUAAAUAAAAGAACCUGCCUCACCAGCAGGUUUUUUU
>URS0000543C9D_316385 Escherichia coli str. K-12 substr. DH10B sroC RNA
ACUAAUUACAAGAACCAGGGGCGGAAAUUCCAGCCCUCUCGAUUGUUACGUAGCACGGACAGACUAUACGCCUGAUGGUC
GUUCCCCAUCGGGCCUGAAAACCGCAAUACGCUGGGUAACAAUCUUCGAGGGUAGCAGUUAACGCUGCUACCCUCUUUUU
UCU
>URS00004200E4_316385 Escherichia coli str. K-12 substr. DH10B CRISPR RNA direct repeat element
GUUCACUGCCGUACAGGCAGCUUAGAAA
>URS00004A6236_316385 Escherichia coli str. K-12 substr. DH10B MicA sRNA
GAAAGACGCGCAUUUGUUAUCAUCAUCCCUGAAUUCAGAGAUGAAAUUUUGGCCACUCACGAGUGGCCUUUU
>URS00006A1E14_316407 Escherichia coli str. K-12 substr. W3110 Enterobacterial sRNA STnc70
AAGGGCAACACCUCAGCCUGCAGGCAGGCACUGAAGAUACCAAAGGGUAGUUCAGAUUACACGGUCACCUGGAAAGGGGG
CCAUUUUACUUUUU
>URS00006A1E14_879462 Escherichia coli str. K-12 substr. MG1655star Enterobacterial sRNA STnc70
AAGGGCAACACCUCAGCCUGCAGGCAGGCACUGAAGAUACCAAAGGGUAGUUCAGAUUACACGGUCACCUGGAAAGGGGG
CCAUUUUACUUUUU
>URS00006DB398_316385 Escherichia coli str. K-12 substr. DH10B Enterobacterial sRNA STnc630
AUUGAACUCUUAAGGUUCACUUAAUCUCUGACGCGCAUACUCUCCUCCAGGUUAACGGAGGAGAGUGCAAUGAAAAACCG
UGUUUAUGAAAGUUUAACUACCGUGUUCAGCGUGCUGGUGGUCAGCAGCUUUCUUUAUAUCUGGUUUGCCACGUACUGAU
CUUUCU
>URS0000460FC7_879462 Escherichia coli str. K-12 substr. MG1655star IS102 RNA
ACGAUCAAUAUCUAUUUUAUCGAUCGUUUAUAUCGAUCGAUAAGCUAAUAAUAACCUUUGUCAGUAACAUGCACAGAUAC
GUACAGAAAGACAUUCAGGGAACAACAGAACCACAAUUCAGAAACUCCCACAGCCGGACCUCCGGCACUGUAACCCUUUA
CCUGCCGGUAUCCACGUUUGUGGGUACCGGCUUUUUUAUUCACC
>URS0000442AE5_879462 Escherichia coli str. K-12 substr. MG1655star CyaR/Rye RNA
UCGCUGAAAAACAUAACCCAUAAAAUGCUAGCUGUACCAGGAACCACCUCCUUAGCCUGUGUAAUCUCCCUUACACGGGC
UUAUUU
>URS00007035AF_316407 Escherichia coli str. K-12 substr. W3110 Salmonella enterica Typhi npcRNA 44
CUUUAAAAAUCUGGAUCAAGCUGAAAAUUGAAACACUGAACAACGAAAGUUGUUCGUGAGUCUCUCAAAUUUUCGCAACA
CGAUGAUGAAUCGUAAGAAACAUCUUCGG
>URS00006DB398_316407 Escherichia coli str. K-12 substr. W3110 Enterobacterial sRNA STnc630
AUUGAACUCUUAAGGUUCACUUAAUCUCUGACGCGCAUACUCUCCUCCAGGUUAACGGAGGAGAGUGCAAUGAAAAACCG
UGUUUAUGAAAGUUUAACUACCGUGUUCAGCGUGCUGGUGGUCAGCAGCUUUCUUUAUAUCUGGUUUGCCACGUACUGAU
CUUUCU
>URS00006DB398_879462 Escherichia coli str. K-12 substr. MG1655star Enterobacterial sRNA STnc630
AUUGAACUCUUAAGGUUCACUUAAUCUCUGACGCGCAUACUCUCCUCCAGGUUAACGGAGGAGAGUGCAAUGAAAAACCG
UGUUUAUGAAAGUUUAACUACCGUGUUCAGCGUGCUGGUGGUCAGCAGCUUUCUUUAUAUCUGGUUUGCCACGUACUGAU
CUUUCU
>URS0000543C9D_316407 Escherichia coli str. K-12 substr. W3110 sroC RNA
ACUAAUUACAAGAACCAGGGGCGGAAAUUCCAGCCCUCUCGAUUGUUACGUAGCACGGACAGACUAUACGCCUGAUGGUC
GUUCCCCAUCGGGCCUGAAAACCGCAAUACGCUGGGUAACAAUCUUCGAGGGUAGCAGUUAACGCUGCUACCCUCUUUUU
UCU
>URS0000454386_316407 Escherichia coli str. K-12 substr. W3110 t44 RNA
CUCACUUUGUGUAACAACACACACGUAUCGGCACAUAUUCCGGGGUGCCCUUUGGGGUCGGUAAUAUGGGAUACGUGGAG
GCAUAAC
>URS0000454386_316385 Escherichia coli str. K-12 substr. DH10B t44 RNA
CUCACUUUGUGUAACAACACACACGUAUCGGCACAUAUUCCGGGGUGCCCUUUGGGGUCGGUAAUAUGGGAUACGUGGAG
GCAUAAC
>URS00004200E4_316407 Escherichia coli str. K-12 substr. W3110 CRISPR RNA direct repeat element
GUUCACUGCCGUACAGGCAGCUUAGAAA
>URS0000AB21EC_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGACAAGACGUUUAUCGCAUCCGGCAGUCGUGUGCAGAUGCCUGAUGCGACGCUAACGCGUCUUAUCAGGCC
>URS0000AB274A_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGCAAGCGCCGCAUCCGACAAGCGAUGCCUGAUGUGACGUUUAACGUGUCUUAUCAGGCC
>URS0000AB274A_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGCAAGCGCCGCAUCCGACAAGCGAUGCCUGAUGUGACGUUUAACGUGUCUUAUCAGGCC
>URS0000AB3A04_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUAACGCCGCAUCCGGCAAUGGUGAACGAUGCCUGAUGCGACGCUCACGCGUCUUAUCAGGCC
>URS000015AD28_316407 Escherichia coli str. K-12 substr. W3110 Enterobacterial sRNA STnc450
CGCUAUACUAGCCACUGAAAAUGCCGGUUCACUUUCUUCGAAUCGGCUUUCAAUGUGU
>URS0000AB5276_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAAUCGUGCACAAUGCCUGAUGCGACGCUGCCGCGUCUUAUCAGGCC
>URS0000AB5276_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAAUCGUGCACAAUGCCUGAUGCGACGCUGCCGCGUCUUAUCAGGCC
>URS0000AB5A22_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
AGCCGGAUAAGGCGCUCGCGCCGCAUCCGGCAACGGUGCCAGAUGCCUGAUGCGACGCUUGCGCGUCUUAUCAGGCC
>URS0000AB6377_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGACGGAUAAGGCGUUUACGCCGCAUCCGGCAUUCAGUGCAAAUGCCAGAUGCGACGCUGACGCGUCUUAUCUGGCC
>URS0000AB6377_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGACGGAUAAGGCGUUUACGCCGCAUCCGGCAUUCAGUGCAAAUGCCAGAUGCGACGCUGACGCGUCUUAUCUGGCC
>URS0000AB6377_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGACGGAUAAGGCGUUUACGCCGCAUCCGGCAUUCAGUGCAAAUGCCAGAUGCGACGCUGACGCGUCUUAUCUGGCC
>URS0000AB6B0E_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GACCGGAUAAGGCGUUCACGCCGCAUCCGGCAGUCGUGCGCCAUGCCUGAUGCGACGCUUUGCGCGUCUUAUCAGGCC
>URS0000AB7C4C_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGGCGGAUAAGGCGUUCACGCCGCAUCCGCCAGUGGCGCGGUGCAGUUGCCGGAUGCAACGCUUGCCGCGUUUUAUCCGG
CC
>URS0000AB7C4C_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGGCGGAUAAGGCGUUCACGCCGCAUCCGCCAGUGGCGCGGUGCAGUUGCCGGAUGCAACGCUUGCCGCGUUUUAUCCGG
CC
>URS0000AB9891_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGACGGAUAAGGCUUUCACGCCUUAUCCGACAACAACUGCCUGAUGCGACGCUGACGCGUCUUAUCAGGCC
>URS0000AB9891_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGACGGAUAAGGCUUUCACGCCUUAUCCGACAACAACUGCCUGAUGCGACGCUGACGCGUCUUAUCAGGCC
>URS0000AB9891_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGACGGAUAAGGCUUUCACGCCUUAUCCGACAACAACUGCCUGAUGCGACGCUGACGCGUCUUAUCAGGCC
>URS0000ABACB4_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGUUUACGCCGCAUCCGACAUCAACGCCUGAUGCGACGCUUGCCGCGUCUUAUCAGGCC
>URS0000ABACB4_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGUUUACGCCGCAUCCGACAUCAACGCCUGAUGCGACGCUUGCCGCGUCUUAUCAGGCC
>URS0000A5F9D7_316385 Escherichia coli str. K-12 substr. DH10B Moco (molybdenum cofactor) riboswitch
AUAACCACUAAACACUCUAGCCUCUGCACCUGGGUCAACUGAUACGGUGCUUUGGCCGUGACAAUGCUCGUAAAGAUUGC
CACCAGGGCGAAGGAAGAAAUGACUUCGCCUCCCGUAUCUGGAAAGGUGUACAUGGCUUCACAAC
>URS0000ABC701_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCGCGCCGCAUCCGGCAGUUGGCGCACAAUGCCUGAUGCGACGCUUGACGCGUCUUAUCAGGCC
>URS00001315A5_316385 Escherichia coli str. K-12 substr. DH10B RydC RNA
CUUCCGAUGUAGACCCGUAUUCUUCGCCUGUACCACGGGUCGGUUUUAGUACAGGCGUUUUCUU
>URS0000257340_316407 Escherichia coli str. K-12 substr. W3110 GcvB RNA
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGGUGAACUUUUGGCUUACGGUUGUGAUGUUGUGUUG
UUGUGUUUGCAAUUGGUCUGCGAUUCAGACCAUGGUAGCAAAGCUACCUUUUUUCACUUCCUGUACAUUUACCCUGUCUG
UCCAUAGUGAUUAAUGUAGCACCGCCUAAUUGCGGUGCUUUUUUUU
>URS0000257340_879462 Escherichia coli str. K-12 substr. MG1655star GcvB RNA
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGGUGAACUUUUGGCUUACGGUUGUGAUGUUGUGUUG
UUGUGUUUGCAAUUGGUCUGCGAUUCAGACCAUGGUAGCAAAGCUACCUUUUUUCACUUCCUGUACAUUUACCCUGUCUG
UCCAUAGUGAUUAAUGUAGCACCGCCUAAUUGCGGUGCUUUUUUUU
>URS0000AB21EC_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGACAAGACGUUUAUCGCAUCCGGCAGUCGUGUGCAGAUGCCUGAUGCGACGCUAACGCGUCUUAUCAGGCC
>URS0000AB3ACF_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAACAGUGCCGACUGCCUGAUGCGACGCUCGCGCGUCUUAUCAGGCC
>URS0000AB3ACF_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAACAGUGCCGACUGCCUGAUGCGACGCUCGCGCGUCUUAUCAGGCC
>URS0000AB56D3_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGGCGGAUAAGGCGUUCACGCCGCAUCCGCCAGUGGCGCGGUGCAAUUGCCGGAUGCGACGCUUGCCGCGUCUUAUCCAG
CC
>URS0000AB5CF1_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGACGUUCACGCCGCAUCCGGCAACUGCGCCAUAAUGCCUGAUGCGACGCUAAACGCGUCUUUUCAGGCG
>URS0000AB5CF1_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGACGUUCACGCCGCAUCCGGCAACUGCGCCAUAAUGCCUGAUGCGACGCUAAACGCGUCUUUUCAGGCG
>URS0000AB5CF1_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGACGUUCACGCCGCAUCCGGCAACUGCGCCAUAAUGCCUGAUGCGACGCUAAACGCGUCUUUUCAGGCG
>URS0000AB5F40_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAACGGUGCCGACUGCCUGAUGCGACGCUUGCGCGUCUUAUCAGGCC
>URS0000AB5F40_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAACGGUGCCGACUGCCUGAUGCGACGCUUGCGCGUCUUAUCAGGCC
>URS0000AB6DFE_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGCAAAGCGCAUCCGGCAUUCAACGCCUGAUGCGACGCUGGCGCGUCUUAUCAGGCC
>URS0000AB6DFE_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGCAAAGCGCAUCCGGCAUUCAACGCCUGAUGCGACGCUGGCGCGUCUUAUCAGGCC
>URS0000AB8461_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAAUGGUGACAAAUGCCUGAUGCGCUACGCUUAUCAGGCC
>URS0000AB8476_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAUCCGAGCACCAUUGCCUGAUGCGACGCUUACCCGUCUUAUCAGGCC
>URS0000AB8476_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUCACGCCGCAUCCGGCAUCCGAGCACCAUUGCCUGAUGCGACGCUUACCCGUCUUAUCAGGCC
>URS0000AB889E_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
UGCGGGAUAAGGCGUUUACGCUGCAUCCGGCAUGGAUUGCCUGAUGUGACGCUGGCGCGUCUUAUCAGGUC
>URS0000AB889E_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
UGCGGGAUAAGGCGUUUACGCUGCAUCCGGCAUGGAUUGCCUGAUGUGACGCUGGCGCGUCUUAUCAGGUC
>URS0000AB8C16_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAAUCGGUGCAAAUGCCAGAUAAGACACUAACGCGUCUUAUCUGGCC
>URS0000AB8C16_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAAUCGGUGCAAAUGCCAGAUAAGACACUAACGCGUCUUAUCUGGCC
>URS0000AB8C16_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGUUUACGCCGCAUCCGGCAAUCGGUGCAAAUGCCAGAUAAGACACUAACGCGUCUUAUCUGGCC
>URS0000AB91A0_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGCCUGAUAAGACGCGGCAGCGUCGCAUCAGGCAUUGUGCACGAUUGCCGGAUGCGGCGUGAACGCCUUAUCCGGCC
>URS0000AB91A0_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGCCUGAUAAGACGCGGCAGCGUCGCAUCAGGCAUUGUGCACGAUUGCCGGAUGCGGCGUGAACGCCUUAUCCGGCC
>URS0000ABA4F3_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGGUUACGCCGCAUCCGACAUCUAACGCCCAAGCCGGUUGCCUGAUGCGACGCUGGCGCGUCUUAUCA
GGCC
>URS0000ABA4F3_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GGUCGGAUAAGGCGGUUACGCCGCAUCCGACAUCUAACGCCCAAGCCGGUUGCCUGAUGCGACGCUGGCGCGUCUUAUCA
GGCC
>URS0000ABA542_316407 Escherichia coli str. K-12 substr. W3110 Nucleoid-associated noncoding RNA 4
GAUCGGAUAAGGCGUUCACGCCGAAUCCGGCAGUUGUGCUCCGAUGCCUGAUGCGACGCUGGCGCGUCUUAUCAGGCC
>URS0000ABA542_879462 Escherichia coli str. K-12 substr. MG1655star Nucleoid-associated noncoding RNA 4
GAUCGGAUAAGGCGUUCACGCCGAAUCCGGCAGUUGUGCUCCGAUGCCUGAUGCGACGCUGGCGCGUCUUAUCAGGCC
>URS0000ABA542_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GAUCGGAUAAGGCGUUCACGCCGAAUCCGGCAGUUGUGCUCCGAUGCCUGAUGCGACGCUGGCGCGUCUUAUCAGGCC
>URS00002B6EFE_879462 Escherichia coli str. K-12 substr. MG1655star Short Intergenic Abundant RNA
UUGACGCUGUUGUUUUUUCAACCUAGAGUAAAGGAACAAGGGUAAGGGAGGAUUUCUCCCCCCUCUGAUGAGUUGUUAGU
AAGUCGGGAAACUUAACAGUAACAACACAACCAGUAUGAUGACGAGCUUCAUCAUAACCCUUUCCUUAUA
>URS0000ABCA31_316385 Escherichia coli str. K-12 substr. DH10B Nucleoid-associated noncoding RNA 4
GGCCGGAUAAGGCGCUCGCGCCGCAUCCGGCAAUCAAUGCCUGAUGCGACGCUGUCGCGUCUUAUCAGGCC
>URS0000018BA8_316385 Escherichia coli str. K-12 substr. DH10B RybB RNA
ACUGCUUUUCUUUGAUGUCCCCAUUUUGUGGAGCCCAUCAACCCCGCCAUUUCGGUUCAAGGUUGAUGGGUUUUUUGUU
>URS0000373BFC_316385 Escherichia coli str. K-12 substr. DH10B ArcZ RNA
GUGCGGCCUGAAAAACAGUGCUGUGCCCUUGUAACUCAUCAUAAUAAUUUACGGCGCAGCCAAGAUUUCCCUGGUGUUGG
CGCAGUAUUCGCGCACCCCGGUCUAGCC
>URS0000018BA8_316407 Escherichia coli str. K-12 substr. W3110 RybB RNA
ACUGCUUUUCUUUGAUGUCCCCAUUUUGUGGAGCCCAUCAACCCCGCCAUUUCGGUUCAAGGUUGAUGGGUUUUUUGUU
>URS0000237957_316407 Escherichia coli str. K-12 substr. W3110 DsrA RNA
AACACAUCAGAUUUCCUGGUGUAACGAAUUUUUUAAGUGCUUCUUGCUUAAGCAAGUUUCAUCCCGACCCCCUCAGGGUC
GGGAUUU
>URS00004FCB98_316407 Escherichia coli str. K-12 substr. W3110 OxyS RNA
GAAACGGAGCGGCACCUCUUUUAACCCUUGAAGUCACUGCCCGUUUCGAGAGUUUCUCAACUCGAAUAACUAAAGCCAAC
GUGAACUUUUGCGGAUCUCCAGGAUCCGCU
>URS0000442AE5_316385 Escherichia coli str. K-12 substr. DH10B CyaR/Rye RNA
UCGCUGAAAAACAUAACCCAUAAAAUGCUAGCUGUACCAGGAACCACCUCCUUAGCCUGUGUAAUCUCCCUUACACGGGC
UUAUUU
>URS000009B1F3_83333 Escherichia coli K-12 Short Intergenic Abundant RNA
UUGACGCUGAUUUUUUUUCAACCUAAAGUAAAGGAACAAGGGUGAGGGAGGAUUUCUCCCCCCUCUGAUUGGCUGUUAAU
AAGCUGCGAAACUUACGAGUAACAACACAAUCAGUAUGAUGACGAGCUUCAUCAUAACCCUUUCCUUCUG
>URS000006C687_316407 Escherichia coli str. K-12 substr. W3110 ryfA RNA
GCGGCCCUUUCCGCCGUCUCGCAAACGGGCGCUGGCUUUAGGAAAGGAUGUUCCGUGGCCGUAAAUGCAGGUGUUUCACA
GCGCUUGCUAUCGCGGCAAUAUCGCCAGUGGUGCUGUCGUGAUGCGGUCUUCGCAUGGACCGCACAAUGAAGAUACGGUG
CUUUUGUAUCGUACUUAUUGUUUCUGGUGCGCUGUUAACCGAGGUAAAUAAUAACCGGAGUCUCUCCGGCGACAAUUUAC
UGGUGGUUAACAACCUUCAGAGCAGCAAGUAAGCCCGAAUGCCGCCCUUUGGGCGGCAUAUUUU
>URS00003A4668_316407 Escherichia coli str. K-12 substr. W3110 OmrA-B family
CCCAGAGGUAUUGAUUGGUGAGAUUAUUCGGUACGCUCUUCGUACCCUGUCUCUUGCACCAACCUGCGCGGAUGCGCAGG
UUUUUUUU
>URS000040613E_316385 Escherichia coli str. K-12 substr. DH10B Short Intergenic Abundant RNA
UUGACAAUCUUAUCGUGAAGGCAUACUUUCAGGAGUGAGGGUAGAGCGGGGUUUCCCCCGCCCUGGUAGUCUUAGUAAGC
GGGGAAGCUUAUGACUAAGAGCACCACGAUGAUGAGUAGCUUCAUCAUGACCCUUUCCUUAUU
>URS0000442AE5_316407 Escherichia coli str. K-12 substr. W3110 CyaR/Rye RNA
UCGCUGAAAAACAUAACCCAUAAAAUGCUAGCUGUACCAGGAACCACCUCCUUAGCCUGUGUAAUCUCCCUUACACGGGC
UUAUUU
>URS000040613E_316407 Escherichia coli str. K-12 substr. W3110 Short Intergenic Abundant RNA
UUGACAAUCUUAUCGUGAAGGCAUACUUUCAGGAGUGAGGGUAGAGCGGGGUUUCCCCCGCCCUGGUAGUCUUAGUAAGC
GGGGAAGCUUAUGACUAAGAGCACCACGAUGAUGAGUAGCUUCAUCAUGACCCUUUCCUUAUU
>URS000009B1F3_316385 Escherichia coli str. K-12 substr. DH10B Short Intergenic Abundant RNA
UUGACGCUGAUUUUUUUUCAACCUAAAGUAAAGGAACAAGGGUGAGGGAGGAUUUCUCCCCCCUCUGAUUGGCUGUUAAU
AAGCUGCGAAACUUACGAGUAACAACACAAUCAGUAUGAUGACGAGCUUCAUCAUAACCCUUUCCUUCUG
>URS00005592C9_316407 Escherichia coli str. K-12 substr. W3110 CsrB/RsmB RNA family
GAGUCAGACAACGAAGUGAACAUCAGGAUGAUGACACUUCUGCAGGACACACCAGGAUGGUGUUUCAGGGAAAGGCUUCU
GGAUGAAGCGAAGAGGAUGACGCAGGACGCGUUAAAGGACACCUCCAGGAUGGAGAAUGAGAACCGGUCAGGAUGAUUCG
GUGGGUCAGGAAGGCCAGGGACACUUCAGGAUGAAGUAUCACAUCGGGGUGGUGUGAGCAGGAAGCAAUAGUUCAGGAUG
AACGAUUGGCCGCAAGGCCAGAGGAAAAGUUGUCAAGGAUGAGCAGGGAGCAACAAAAGUAGCUGGAAUGCUGCGAAACG
AACCGGGAGCGCUGUGAAUACAGUGCUCCCUUUUUUUAUU
>URS00004CBB1A_316385 Escherichia coli str. K-12 substr. DH10B sroB RNA
ACACCGUCGCUUAAAGUGACGGCAUAAUAAUAAAAAAAUGAAAUUCCUCUUUGACGGGCCAAUAGCGAUAUUGGCCAUUU
UUUU
>URS00004FCB98_316385 Escherichia coli str. K-12 substr. DH10B OxyS RNA
GAAACGGAGCGGCACCUCUUUUAACCCUUGAAGUCACUGCCCGUUUCGAGAGUUUCUCAACUCGAAUAACUAAAGCCAAC
GUGAACUUUUGCGGAUCUCCAGGAUCCGCU
>URS000009B1F3_316407 Escherichia coli str. K-12 substr. W3110 Short Intergenic Abundant RNA
UUGACGCUGAUUUUUUUUCAACCUAAAGUAAAGGAACAAGGGUGAGGGAGGAUUUCUCCCCCCUCUGAUUGGCUGUUAAU
AAGCUGCGAAACUUACGAGUAACAACACAAUCAGUAUGAUGACGAGCUUCAUCAUAACCCUUUCCUUCUG
>URS00005592C9_316385 Escherichia coli str. K-12 substr. DH10B CsrB/RsmB RNA family
GAGUCAGACAACGAAGUGAACAUCAGGAUGAUGACACUUCUGCAGGACACACCAGGAUGGUGUUUCAGGGAAAGGCUUCU
GGAUGAAGCGAAGAGGAUGACGCAGGACGCGUUAAAGGACACCUCCAGGAUGGAGAAUGAGAACCGGUCAGGAUGAUUCG
GUGGGUCAGGAAGGCCAGGGACACUUCAGGAUGAAGUAUCACAUCGGGGUGGUGUGAGCAGGAAGCAAUAGUUCAGGAUG
AACGAUUGGCCGCAAGGCCAGAGGAAAAGUUGUCAAGGAUGAGCAGGGAGCAACAAAAGUAGCUGGAAUGCUGCGAAACG
AACCGGGAGCGCUGUGAAUACAGUGCUCCCUUUUUUUAUU
>URS0000199749_316407 Escherichia coli str. K-12 substr. W3110 SgrS RNA
GAUGAAGCAAGGGGGUGCCCCAUGCGUCAGUUUUAUCAGCACUAUUUUACCGCGACAGCGAAGUUGUGCUGGUUGCGUUG
GUUAAGCGUCCCACAACGAUUAACCAUGCUUGAAGGACUGAUGCAGUGGGAUGACCGCAAUUCUGAAAGUUGACUUGCCU
GCAUCAUGUGUGACUGAGUAUUGGUGUAAAAUCACCCGCCAGCAGAUUAUACCUGCUGGUUUUUUUU
>URS00002EF971_316385 Escherichia coli str. K-12 substr. DH10B GcvB RNA
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGGUGAACUUUUGGCUUACGGUUGUGUUGUUGUGUUU
GCAAUUGGUCUGCGAUUCAGACCAUGGUAGCAAAGCUACCUUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGU
GAUUAAUGUAGCACCGCCUAAUUGCGGUGCUUUUUUUU
>URS00003146CE_316407 Escherichia coli str. K-12 substr. W3110 6S / SsrS RNA
AUUUCUCUGAGAUGUUCGCAAGCGGGCCAGUCCCCUGAGCCGAUAUUUCAUACCACAAGAAUGUGGCGCUCCGCGGUUGG
UGAGCAUGCUCGGUCCGUCCGAGAAGCCUUAAAACUGCGACGACACAUUCACCUUGAACCAAGGGUUCAAGGGUUACAGC
CUGCGGCGGCAUCUCGGAGAUUCC
>URS00004E5F89_316385 Escherichia coli str. K-12 substr. DH10B Short Intergenic Abundant RNA
UUGACACUAAGGGCGGAGUGACAUAAUUUCAGGAGUGAGGGUUAGGGAGAGGUUUCCCCCUCCCCCUGGUGUUCUUAGUA
AGCCUGGAAGCUAAUCACUAAGAGUAUCACCAGUAUGAUGACGUGCUUCAUCAUAACCCUUUCCUUAUU
>URS000043222F_316385 Escherichia coli str. K-12 substr. DH10B SraB RNA
UAGGCAUAUUUUUUUCCAUCAGAUAUAGCGUAUUGAUGAUAGCCAUUUUAAACUAUGCGCUUCGUUUUGCAGGUUGAUGU
UUGUUAUCAGCACUGAACGAAAAUAAAGCAGUAACCCGCAAUGUGUGCGAAUUAUUGGCAAAAGGCAACCACAGGCUGCC
UUUUUCUUU
>URS00004F2222_316407 Escherichia coli str. K-12 substr. W3110 Short Intergenic Abundant RNA
UUGACAUCGUUGAUUCUUUGACCUAAUUUAGUGAGUAAGGGUAAGGGAGGAUUGCUCCUCCCCUGAGACUGACUGUUAAU
AAGCGCUGAAACUUAUGAGUAACAGUACAAUCAGUAUGAUGACAAGUCGCAUCAUAACCCUUCUCCUUCAA
>URS00004F2222_316385 Escherichia coli str. K-12 substr. DH10B Short Intergenic Abundant RNA
UUGACAUCGUUGAUUCUUUGACCUAAUUUAGUGAGUAAGGGUAAGGGAGGAUUGCUCCUCCCCUGAGACUGACUGUUAAU
AAGCGCUGAAACUUAUGAGUAACAGUACAAUCAGUAUGAUGACAAGUCGCAUCAUAACCCUUCUCCUUCAA
>URS0000373BFC_316407 Escherichia coli str. K-12 substr. W3110 ArcZ RNA
GUGCGGCCUGAAAAACAGUGCUGUGCCCUUGUAACUCAUCAUAAUAAUUUACGGCGCAGCCAAGAUUUCCCUGGUGUUGG
CGCAGUAUUCGCGCACCCCGGUCUAGCC
>URS0000460FC7_316407 Escherichia coli str. K-12 substr. W3110 IS102 RNA
ACGAUCAAUAUCUAUUUUAUCGAUCGUUUAUAUCGAUCGAUAAGCUAAUAAUAACCUUUGUCAGUAACAUGCACAGAUAC
GUACAGAAAGACAUUCAGGGAACAACAGAACCACAAUUCAGAAACUCCCACAGCCGGACCUCCGGCACUGUAACCCUUUA
CCUGCCGGUAUCCACGUUUGUGGGUACCGGCUUUUUUAUUCACC
>URS00003A4668_316385 Escherichia coli str. K-12 substr. DH10B OmrA-B family
CCCAGAGGUAUUGAUUGGUGAGAUUAUUCGGUACGCUCUUCGUACCCUGUCUCUUGCACCAACCUGCGCGGAUGCGCAGG
UUUUUUUU
>URS00004E5F89_316407 Escherichia coli str. K-12 substr. W3110 Short Intergenic Abundant RNA
UUGACACUAAGGGCGGAGUGACAUAAUUUCAGGAGUGAGGGUUAGGGAGAGGUUUCCCCCUCCCCCUGGUGUUCUUAGUA
AGCCUGGAAGCUAAUCACUAAGAGUAUCACCAGUAUGAUGACGUGCUUCAUCAUAACCCUUUCCUUAUU
>URS0000460FC7_316385 Escherichia coli str. K-12 substr. DH10B IS102 RNA
ACGAUCAAUAUCUAUUUUAUCGAUCGUUUAUAUCGAUCGAUAAGCUAAUAAUAACCUUUGUCAGUAACAUGCACAGAUAC
GUACAGAAAGACAUUCAGGGAACAACAGAACCACAAUUCAGAAACUCCCACAGCCGGACCUCCGGCACUGUAACCCUUUA
CCUGCCGGUAUCCACGUUUGUGGGUACCGGCUUUUUUAUUCACC
>URS000006C687_316385 Escherichia coli str. K-12 substr. DH10B ryfA RNA
GCGGCCCUUUCCGCCGUCUCGCAAACGGGCGCUGGCUUUAGGAAAGGAUGUUCCGUGGCCGUAAAUGCAGGUGUUUCACA
GCGCUUGCUAUCGCGGCAAUAUCGCCAGUGGUGCUGUCGUGAUGCGGUCUUCGCAUGGACCGCACAAUGAAGAUACGGUG
CUUUUGUAUCGUACUUAUUGUUUCUGGUGCGCUGUUAACCGAGGUAAAUAAUAACCGGAGUCUCUCCGGCGACAAUUUAC
UGGUGGUUAACAACCUUCAGAGCAGCAAGUAAGCCCGAAUGCCGCCCUUUGGGCGGCAUAUUUU
>URS00002B6EFE_83333 Escherichia coli K-12 Short Intergenic Abundant RNA
UUGACGCUGUUGUUUUUUCAACCUAGAGUAAAGGAACAAGGGUAAGGGAGGAUUUCUCCCCCCUCUGAUGAGUUGUUAGU
AAGUCGGGAAACUUAACAGUAACAACACAACCAGUAUGAUGACGAGCUUCAUCAUAACCCUUUCCUUAUA
>URS000043222F_316407 Escherichia coli str. K-12 substr. W3110 SraB RNA
UAGGCAUAUUUUUUUCCAUCAGAUAUAGCGUAUUGAUGAUAGCCAUUUUAAACUAUGCGCUUCGUUUUGCAGGUUGAUGU
UUGUUAUCAGCACUGAACGAAAAUAAAGCAGUAACCCGCAAUGUGUGCGAAUUAUUGGCAAAAGGCAACCACAGGCUGCC
UUUUUCUUU