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1 | # Prerequisites | 1 | # Prerequisites |
2 | 2 | ||
3 | -## Get sources | 3 | +## Automatic installation |
4 | + | ||
5 | +### Dependency | ||
6 | +In order to run the automatic installation, one need to install conda with python3. | ||
7 | +The installation of conda with python3 is described [here](https://docs.anaconda.com/anaconda/install/linux). | ||
8 | + | ||
9 | +### Run the installation | ||
10 | +Dowload the installation script from [here](https://entrepot.ibisc.univ-evry.fr/f/d4f79b0ef2f545d99ca5/?dl=1). | ||
11 | +The installation can be run by: | ||
12 | +```bash | ||
13 | +chmod +x script_irsom.sh | ||
14 | +./script_irsom.sh ENV_NAME | ||
15 | +``` | ||
16 | +where `ENV_NAME` is the conda environment name which will be created. | ||
17 | + | ||
18 | +## Manual installation | ||
19 | +### Get sources | ||
4 | 20 | ||
5 | The IRSOM tools can be download as follow: | 21 | The IRSOM tools can be download as follow: |
6 | ```bash | 22 | ```bash |
... | @@ -8,7 +24,7 @@ git clone https://forge.ibisc.univ-evry.fr/lplaton/IRSOM.git | ... | @@ -8,7 +24,7 @@ git clone https://forge.ibisc.univ-evry.fr/lplaton/IRSOM.git |
8 | ``` | 24 | ``` |
9 | IRSOM has been devleoped on python3. | 25 | IRSOM has been devleoped on python3. |
10 | 26 | ||
11 | -## Python package | 27 | +### Python package |
12 | 28 | ||
13 | 1. [Matplotlib](https://matplotlib.org/) | 29 | 1. [Matplotlib](https://matplotlib.org/) |
14 | 2. [Pandas](http://pandas.pydata.org/) | 30 | 2. [Pandas](http://pandas.pydata.org/) |
... | @@ -25,7 +41,7 @@ where ${path\_IRSOM} is the path to the directory of IRSOM. | ... | @@ -25,7 +41,7 @@ where ${path\_IRSOM} is the path to the directory of IRSOM. |
25 | 41 | ||
26 | For better performance, we recommend to rebuild [TensorFlow](https://www.tensorflow.org/install) from [sources](https://www.tensorflow.org/install/install_sources). | 42 | For better performance, we recommend to rebuild [TensorFlow](https://www.tensorflow.org/install) from [sources](https://www.tensorflow.org/install/install_sources). |
27 | 43 | ||
28 | -## Compilation Featurer | 44 | +### Compilation Featurer |
29 | The repository contains a compiled Featurer compiled on linux in the bin folder. | 45 | The repository contains a compiled Featurer compiled on linux in the bin folder. |
30 | If needed, the binary can be compiles using the [Qt5](https://www1.qt.io/developers/) tools by doing: | 46 | If needed, the binary can be compiles using the [Qt5](https://www1.qt.io/developers/) tools by doing: |
31 | ``` bash | 47 | ``` bash | ... | ... |
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