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... | @@ -1638,6 +1638,7 @@ def sql_ask_database(conn, sql, warn_every = 10): | ... | @@ -1638,6 +1638,7 @@ def sql_ask_database(conn, sql, warn_every = 10): |
1638 | 1638 | ||
1639 | @trace_unhandled_exceptions | 1639 | @trace_unhandled_exceptions |
1640 | def sql_execute(conn, sql, many=False, data=None, warn_every=10): | 1640 | def sql_execute(conn, sql, many=False, data=None, warn_every=10): |
1641 | + conn.execute('pragma journal_mode=wal') # Allow multiple other readers to ask things while we execute this writing query | ||
1641 | for _ in range(100): # retry 100 times if it fails | 1642 | for _ in range(100): # retry 100 times if it fails |
1642 | try: | 1643 | try: |
1643 | if many: | 1644 | if many: | ... | ... |
... | @@ -3,7 +3,7 @@ | ... | @@ -3,7 +3,7 @@ |
3 | # Run RNANet | 3 | # Run RNANet |
4 | cd /home/lbecquey/Projects/RNANet; | 4 | cd /home/lbecquey/Projects/RNANet; |
5 | rm -f stdout.txt stderr.txt errors.txt; | 5 | rm -f stdout.txt stderr.txt errors.txt; |
6 | -time './RNAnet.py --3d-folder /home/lbequey/Data/RNA/3D/ --seq-folder /home/lbecquey/Data/RNA/sequences/ -s -r 20.0' > stdout.txt 2> stderr.txt; | 6 | +time './RNAnet.py --3d-folder /home/lbequey/Data/RNA/3D/ --seq-folder /home/lbecquey/Data/RNA/sequences/ -s -r 20.0 --archive' > stdout.txt 2> stderr.txt; |
7 | 7 | ||
8 | # Sync in Seafile | 8 | # Sync in Seafile |
9 | seaf-cli start; | 9 | seaf-cli start; | ... | ... |
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