Louis BECQUEY / RNANetLegacy

21 Apr, 2020 1 commit
- ON CONFLICT clauses for SQL updates · 7b99a37e
  7b99a37e Browse Files
  
  Louis BECQUEY authored 2020-04-21 06:54:04 +0000
20 Apr, 2020 1 commit
- merge with IBISC branch · d9d32d4e
  d9d32d4e Browse Files
  
  Louis BECQUEY authored 2020-04-20 08:18:18 +0000
18 Apr, 2020 4 commits
- better errors with 20A structures · cf484aad
  cf484aad Browse Files
  
  Louis BECQUEY authored 2020-04-18 23:04:51 +0200
- Take puckering into account when detecting ligands · c9cbadf0
  c9cbadf0 Browse Files
  
  Louis BECQUEY authored 2020-04-18 20:33:21 +0000
- Sqlite connection inside Chain object · 959a521e
  959a521e Browse File
  
  Louis BECQUEY authored 2020-04-18 14:15:38 +0000
- Pipeline class · 56fd6817
  56fd6817
  
  Louis BECQUEY authored 2020-04-18 10:54:30 +0000
10 Apr, 2020 1 commit
- That big restructuration before you publish · 343a7ef5
  343a7ef5 Browse Files
  
  Louis BECQUEY authored 2020-04-10 14:42:08 +0000
03 Apr, 2020 3 commits
- only one DSSR analysis on whole mmCIF, shared accross chains · cd84ecd7
  cd84ecd7 Browse Files
  
  Louis BECQUEY authored 2020-04-03 20:29:48 +0200
- SQL Corrections · 878a000d
  878a000d Browse Files
  
  Louis BECQUEY authored 2020-04-03 16:18:37 +0200
- using sqlite instead of text files · 95a00b56
  95a00b56 Browse Files
  
  Louis BECQUEY authored 2020-04-03 07:53:13 +0000
31 Mar, 2020 1 commit
- With stats results · 40cb5b7f
  40cb5b7f Browse Files
  
  Louis BECQUEY authored 2020-03-31 14:05:21 +0000
30 Mar, 2020 2 commits
- Merge branch 'master' of https://github.com/persalteas/RNANet · 36f12c24
  36f12c24 Browse Files
  
  Louis BECQUEY authored 2020-03-30 13:46:00 +0000
- Statistics over the produced data · f589903e
  f589903e Browse Files
  
  Louis BECQUEY authored 2020-03-30 15:29:09 +0200
28 Mar, 2020 1 commit
- Renamed some descriptors to match the paper · b413f518
  b413f518 Browse Files
  
  Louis BECQUEY authored 2020-03-28 12:31:39 +0000
20 Mar, 2020 2 commits
- parallel computation of distance matrices · a6ac991b
  a6ac991b Browse File
  
  Louis BECQUEY authored 2020-03-20 16:01:32 +0000
- Distance matrices of 3D data · ee5f1256
  ee5f1256 Browse Files
  
  Louis BECQUEY authored 2020-03-20 16:42:51 +0100
19 Mar, 2020 2 commits
- Merge branch 'master' of https://github.com/persalteas/RNAnet · 220d1a3e
  220d1a3e Browse Files
  
  Louis BECQUEY authored 2020-03-19 11:52:21 +0100
- Lower RAM usage · 47f8a2ba
  47f8a2ba Browse Files
  
  Louis BECQUEY authored 2020-03-19 11:51:39 +0100
18 Mar, 2020 1 commit
- updated dependancy list · 59dc03a6
  59dc03a6 Browse Files
  
  Louis BECQUEY authored 2020-03-18 10:24:52 +0100
17 Mar, 2020 1 commit
- Mapping inference from BGSU lists · c9882ee5
  c9882ee5 Browse Files
  
  Louis BECQUEY authored 2020-03-17 18:42:48 +0000
12 Mar, 2020 3 commits
- removed tests · 8800ab7b
  8800ab7b Browse Files
  
  Louis BECQUEY authored 2020-03-12 09:55:48 +0000
- Merge branch 'master' of https://github.com/persalteas/RNANet · 1775df02
  1775df02 Browse Files
  
  Louis BECQUEY authored 2020-03-12 09:54:44 +0000
- Command line options · cc198903
  cc198903 Browse Files
  
  Louis BECQUEY authored 2020-03-12 09:54:37 +0000
11 Mar, 2020 3 commits
- Update Readme.md · f34f5bd8
  f34f5bd8 Browse Files
  
  Louis BECQUEY authored 2020-03-11 09:42:23 +0100
- Include tests in git repo · 39010e76
  39010e76 Browse Files
  
  Louis BECQUEY authored 2020-03-11 08:36:39 +0000
- align_nt_stats moved to Chain class as method · d5dc9e3a
  d5dc9e3a
  
  Louis BECQUEY authored 2020-03-11 08:35:24 +0000
01 Mar, 2020 1 commit
- Removed non-significant peaks (avg + 1 sd threshold) · f29ffed0
  f29ffed0 Browse Files
  
  Louis BECQUEY authored 2020-03-01 22:53:13 +0100
28 Feb, 2020 2 commits
- Updated dependencies in Readme · 76f64493
  76f64493 Browse Files
  
  Louis BECQUEY authored 2020-02-28 17:12:48 +0100
- aesthetics, comments, and statistics on the produced data · 091f1528
  091f1528 Browse Files
  
  Louis BECQUEY authored 2020-02-28 16:04:39 +0000
25 Feb, 2020 1 commit
- wrong line index in datapoint file when 1-hot encoding nts · a0c0c2a2
  a0c0c2a2 Browse Files
  
  Louis BECQUEY authored 2020-02-25 09:44:34 +0000
20 Feb, 2020 3 commits
- Support both Intel and AMD · 8ff97fd7
  8ff97fd7 Browse Files
  
  Louis BECQUEY authored 2020-02-20 22:07:09 +0100
- names in the progress bars · 5346ef89
  5346ef89 Browse Files
  
  Louis BECQUEY authored 2020-02-20 21:02:00 +0000
- tqdm progress bars · 97b2613e
  97b2613e
  
  Louis BECQUEY authored 2020-02-20 17:51:27 +0000
18 Feb, 2020 1 commit
- exceptions parsed · 8d1af7ec
  8d1af7ec Browse Files
  
  Louis BECQUEY authored 2020-02-18 08:57:25 +0000
12 Feb, 2020 1 commit
- better mapping of the gaps onto the alignments · dbba072f
  dbba072f Browse Files
  
  Louis BECQUEY authored 2020-02-12 22:17:37 +0100
06 Feb, 2020 2 commits
- Correct alignment of mappings · 48c4d3ee
  48c4d3ee Browse Files
  
  Louis BECQUEY authored 2020-02-06 17:51:55 +0100
- forgot some [] in subprocess.run for SINA · 5f7f3e62
  5f7f3e62 Browse Files
  
  Louis BECQUEY authored 2020-02-06 10:09:39 +0100
05 Feb, 2020 1 commit
- Moved to SINA alignments for rRNA LSUs · 35318812
  35318812 Browse Files
  
  Louis BECQUEY authored 2020-02-05 16:12:27 +0100
31 Jan, 2020 2 commits
- Replaçing modified nucleotides by consensus · b65082e5
  b65082e5 Browse Files
  
  Louis BECQUEY authored 2020-01-31 16:50:17 +0100
- cut RF02543 in pieces · d3dd32d7
  d3dd32d7 Browse Files
  
  Louis BECQUEY authored 2020-01-31 10:00:25 +0100