Louis BECQUEY / RNANetLegacy

12 Feb, 2020 1 commit
- better mapping of the gaps onto the alignments · dbba072f
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  Louis BECQUEY authored 2020-02-12 22:17:37 +0100
06 Feb, 2020 2 commits
- Correct alignment of mappings · 48c4d3ee
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  Louis BECQUEY authored 2020-02-06 17:51:55 +0100
- forgot some [] in subprocess.run for SINA · 5f7f3e62
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  Louis BECQUEY authored 2020-02-06 10:09:39 +0100
05 Feb, 2020 1 commit
- Moved to SINA alignments for rRNA LSUs · 35318812
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  Louis BECQUEY authored 2020-02-05 16:12:27 +0100
31 Jan, 2020 2 commits
- Replaçing modified nucleotides by consensus · b65082e5
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  Louis BECQUEY authored 2020-01-31 16:50:17 +0100
- cut RF02543 in pieces · d3dd32d7
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  Louis BECQUEY authored 2020-01-31 10:00:25 +0100
27 Jan, 2020 1 commit
- special treatments for RF02543 · fb9e35fc
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  Louis BECQUEY authored 2020-01-27 11:08:32 +0100
22 Jan, 2020 6 commits
- Removed restrictions to short RNA families · 3c4d8521
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  Louis BECQUEY authored 2020-01-22 21:00:32 +0000
- Ready for cloud computations · 854eaf9a
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  Louis BECQUEY authored 2020-01-22 13:49:25 +0000
- Merge branch 'master' of https://github.com/persalteas/RNAnet · bbb50777
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  Louis BECQUEY authored 2020-01-22 14:25:08 +0100
- retablish numbering relative to the RNA chain · 6dc713d1
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  Louis BECQUEY authored 2020-01-22 14:25:02 +0100
- Added IFB-core cloud machine support · 24a16a65
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  Louis BECQUEY authored 2020-01-22 13:22:28 +0000
- update dependencies list · b27a935f
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  Louis BECQUEY authored 2020-01-22 10:07:53 +0100
17 Jan, 2020 2 commits
- Merge branch 'master' of https://github.com/persalteas/RNAnet · 6215676f
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  Louis BECQUEY authored 2020-01-17 14:22:36 +0100
- SImplification using MMCIFIO · 98f9f8a6
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  Louis BECQUEY authored 2020-01-17 14:22:01 +0100
04 Jan, 2020 4 commits
- Update README.md · b17d83bb
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  Louis BECQUEY authored 2020-01-04 11:04:21 +0100
- Description in readme' · 98a5af7f
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  Louis BECQUEY authored 2020-01-04 10:56:07 +0100
- Description in Readme · ce31530a
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  Louis BECQUEY authored 2020-01-04 10:54:03 +0100
- moved to py 3.8 · 67221e5c
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  Louis BECQUEY authored 2020-01-04 10:31:42 +0100
03 Jan, 2020 2 commits
- Added regression files · e93a0805
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  Louis BECQUEY authored 2020-01-03 13:24:00 +0100
- handling NoSuchProcessException · 2bc27a13
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  Louis BECQUEY authored 2020-01-03 04:04:32 +0100
20 Dec, 2019 3 commits
- concurrent.futures + psutil · a62ed3d5
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  Louis BECQUEY authored 2019-12-20 11:41:06 +0100
- using psutil to correctly watch children processes · 7618307b
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  Louis BECQUEY authored 2019-12-20 10:28:24 +0100
- Revert "Using resource package" · a26f09de ...
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```
This reverts commit 9c1b154f.
```
  Louis BECQUEY authored 2019-12-20 09:20:48 +0100
19 Dec, 2019 4 commits
- Using resource package · 73b81770
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  Louis BECQUEY authored 2019-12-20 00:19:25 +0100
- some more aesthetics · ebd7d6cb
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  Louis BECQUEY authored 2019-12-19 15:41:41 +0100
- Clean threading · 204c9521
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  Louis BECQUEY authored 2019-12-19 14:14:21 +0100
- Replacing threads by futures · 6b690e6b
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  Louis BECQUEY authored 2019-12-19 09:43:21 +0100
18 Dec, 2019 2 commits
- Tracking memory usage · 236b8b48
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  Louis BECQUEY authored 2019-12-18 16:26:29 +0100
- Tackling RF02541 · 8dc6c80a
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  Louis BECQUEY authored 2019-12-18 14:05:49 +0100
03 Dec, 2019 2 commits
- Merge branch 'master' of https://github.com/persalteas/RNAnet · 9238dc77
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  Louis BECQUEY authored 2019-12-03 18:01:59 +0100
- Rfam stats query with separate SQL · 5507b8ac
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  Louis BECQUEY authored 2019-12-03 18:01:22 +0100
29 Nov, 2019 1 commit
- relatively installation-proof paths · 6e2e1e69
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  Louis BECQUEY authored 2019-11-29 08:24:39 +0100
28 Nov, 2019 2 commits
- remove doublons from Rfam FASTA files automatically · 622e7000
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  Louis BECQUEY authored 2019-11-28 21:15:42 +0100
- non HTTPS downloads for compatibility · c8aa3323
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  Louis BECQUEY authored 2019-11-28 18:28:29 +0100
27 Nov, 2019 3 commits
- Update README.md · 84c09e7e
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  Louis BECQUEY authored 2019-11-27 08:57:59 +0100
- RNANet.py, from downloads to re-align via cmalign · 5ff9e784
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  Louis BECQUEY authored 2019-11-27 08:57:18 +0100
- Initial commit · 1bd30eaa
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  Louis BECQUEY authored 2019-11-27 08:56:20 +0100