Ludovic PLATON

Update README.md

......@@ -63,12 +63,5 @@ Default usage:
python scripts/predict.py --featurer=${path_IRSOM}/bin/featurer --file=fasta_file.fasta --model=${path_IRSOM}/model/species/ --output=output_dir_of_result
```
The rejection option can be use with the parameter --rejection.
For example, to predict with a rejection treshold of 0.8, we run the command:
``` bash
python scripts/predict.py --featurer=${path_IRSOM}/bin/featurer --file=fasta_file.fasta --model=${path_IRSOM}/model/species/ --output=output_dir_of_result --rejection=0.8
```
As for the train script, the features are removed by default.
To keep them, use the parameter --keep\_features.
......