Louis BECQUEY / RNANet

01 Oct, 2020 1 commit
- Revision 1 for Bioinformatics completed · 7196427d
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  Louis BECQUEY authored 2020-10-01 12:15:57 +0200
25 Sep, 2020 2 commits
- maxtaskperchild, again · d266c643
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  Louis BECQUEY authored 2020-09-25 11:19:22 +0200
- Replaced NULL rfam_acc values by unmappd · 752ddc4e
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  Louis BECQUEY authored 2020-09-25 10:19:30 +0200
24 Sep, 2020 1 commit
- Do not use maxtaskperchild=1 · 28c116ce
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  Louis BECQUEY authored 2020-09-24 10:01:18 +0200
23 Sep, 2020 2 commits
- Rethink how inferred mappings work · b484b3f6
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  Louis BECQUEY authored 2020-09-23 21:30:51 +0200
- Troubleshooting · 3293b90c
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  Louis BECQUEY authored 2020-09-23 21:30:01 +0200
22 Sep, 2020 1 commit
- More command line options · 1f847a30
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  Louis BECQUEY authored 2020-09-22 10:03:47 +0200
21 Sep, 2020 3 commits
- Merge branch 'master' of https://github.com/persalteas/RNANet into master · 6cc5142f
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  Louis BECQUEY authored 2020-09-21 14:14:43 +0200
- replaced old urllib2 functions by calls to wget · 60bd1aec
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  Louis BECQUEY authored 2020-09-21 14:14:23 +0200
- Inclusion of NR list class in DB · d645ce5e
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  Louis BECQUEY authored 2020-09-21 14:09:20 +0200
10 Sep, 2020 1 commit
- typo in statistics.py + recomputation · 72e8fc2f
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  Louis BECQUEY authored 2020-09-10 09:07:20 +0200
09 Sep, 2020 2 commits
- Merge branch 'master' of https://github.com/persalteas/RNANet into master · 97926e0b
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  Louis BECQUEY authored 2020-09-09 16:58:42 +0200
- now supports UR3 and CM0 modified residues · 61d2238e
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  Louis BECQUEY authored 2020-09-09 16:57:52 +0200
08 Sep, 2020 1 commit
- Improved automation · e57395a9
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  Louis BECQUEY authored 2020-09-08 17:57:14 +0200
25 Aug, 2020 6 commits
- replaces stdout/stderr by nohup.out · c9d07387
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  Louis BECQUEY authored 2020-08-25 19:56:42 +0000
- versioning details · bcf65779
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  Louis BECQUEY authored 2020-08-25 19:29:06 +0000
- automation details · be756956
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  Louis BECQUEY authored 2020-08-25 14:53:23 +0000
- chmod +x automate.sh · 5b788118
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  Louis BECQUEY authored 2020-08-25 13:39:50 +0000
- automation script for EvryRNA · d8eb4c71
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  Louis BECQUEY authored 2020-08-25 13:38:24 +0000
- Better parallel statistics computation · 1854316d
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  Louis BECQUEY authored 2020-08-25 07:09:43 +0000
12 Aug, 2020 1 commit
- solved issue if duplicate nt_resnum at the end of the chain · 3b5ed451
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  Louis BECQUEY authored 2020-08-12 04:44:12 +0000
11 Aug, 2020 1 commit
- resnum redundancy followed by gaps is not correctly parsed · a4b2c505
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  Louis BECQUEY authored 2020-08-11 11:44:10 +0200
05 Aug, 2020 3 commits
- typo in help message · fa955118
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  Louis BECQUEY authored 2020-08-05 23:08:39 +0200
- update Readme · 0cf99264
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  Louis BECQUEY authored 2020-08-05 23:03:13 +0200
- Reordered steps in 3D data extraction + removed inverted numbering support · 3c2f649f
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  Louis BECQUEY authored 2020-08-05 22:52:47 +0200
28 Jul, 2020 1 commit
- Nt-specific Biopython PortionSelector · bd665f4f
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  Louis BECQUEY authored 2020-07-28 17:24:23 +0200
23 Jul, 2020 2 commits
- debugged doublon checking in MSAs · 18394e1c
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  Louis BECQUEY authored 2020-07-23 16:37:44 +0200
- Registers ignored chains to database · 5af4d125
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  Louis BECQUEY authored 2020-07-23 11:44:12 +0200
22 Jul, 2020 1 commit
- check for doublons when merging alignments · 575b5164
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  Louis BECQUEY authored 2020-07-22 12:44:49 +0000
21 Jul, 2020 3 commits
- Removed known issues files · bb1d3c1b
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  Louis BECQUEY authored 2020-07-21 11:20:44 +0000
- new debug command line options · ceeb8a24
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  Louis BECQUEY authored 2020-07-21 10:39:52 +0200
- selection of nt range for reversed chains · b68b73f6
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  Louis BECQUEY authored 2020-07-21 07:49:30 +0000
17 Jul, 2020 1 commit
- Solved crashes with --no-homology · d9616243
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  Louis BECQUEY authored 2020-07-17 14:41:18 +0200
08 Jul, 2020 1 commit
- Sanitizing post computation checks · 31785c99
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  Louis BECQUEY authored 2020-07-08 18:13:21 +0200
06 Jul, 2020 1 commit
- Better cut dataframes (cut at Rfam mapping) · c21f55fc
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  Louis BECQUEY authored 2020-07-06 20:29:36 +0200
23 Jun, 2020 1 commit
- reduced remap() I/O · 98c2907a
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  Louis BECQUEY authored 2020-06-23 10:20:52 +0200
22 Jun, 2020 1 commit
- better warnings · 6e48f628
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  Louis BECQUEY authored 2020-06-22 21:45:46 +0200
29 May, 2020 2 commits
- Supports mappings of multiple portions to one family · b910de9e
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  Louis BECQUEY authored 2020-05-29 14:44:05 +0200
- force python3.8 for the post-computation scripts · 78e5248c
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  Louis BECQUEY authored 2020-05-29 08:40:50 +0000
23 Apr, 2020 1 commit
- Latest statistics on basepair counts by chain · 6d1b967e
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  Louis BECQUEY authored 2020-04-23 21:52:27 +0200