Louis BECQUEY / RNANet

25 Aug, 2020 6 commits
- replaces stdout/stderr by nohup.out · c9d07387
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  Louis BECQUEY authored 2020-08-25 19:56:42 +0000
- versioning details · bcf65779
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  Louis BECQUEY authored 2020-08-25 19:29:06 +0000
- automation details · be756956
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  Louis BECQUEY authored 2020-08-25 14:53:23 +0000
- chmod +x automate.sh · 5b788118
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  Louis BECQUEY authored 2020-08-25 13:39:50 +0000
- automation script for EvryRNA · d8eb4c71
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  Louis BECQUEY authored 2020-08-25 13:38:24 +0000
- Better parallel statistics computation · 1854316d
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  Louis BECQUEY authored 2020-08-25 07:09:43 +0000
12 Aug, 2020 1 commit
- solved issue if duplicate nt_resnum at the end of the chain · 3b5ed451
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  Louis BECQUEY authored 2020-08-12 04:44:12 +0000
11 Aug, 2020 1 commit
- resnum redundancy followed by gaps is not correctly parsed · a4b2c505
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  Louis BECQUEY authored 2020-08-11 11:44:10 +0200
05 Aug, 2020 3 commits
- typo in help message · fa955118
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  Louis BECQUEY authored 2020-08-05 23:08:39 +0200
- update Readme · 0cf99264
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  Louis BECQUEY authored 2020-08-05 23:03:13 +0200
- Reordered steps in 3D data extraction + removed inverted numbering support · 3c2f649f
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  Louis BECQUEY authored 2020-08-05 22:52:47 +0200
28 Jul, 2020 1 commit
- Nt-specific Biopython PortionSelector · bd665f4f
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  Louis BECQUEY authored 2020-07-28 17:24:23 +0200
23 Jul, 2020 2 commits
- debugged doublon checking in MSAs · 18394e1c
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  Louis BECQUEY authored 2020-07-23 16:37:44 +0200
- Registers ignored chains to database · 5af4d125
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  Louis BECQUEY authored 2020-07-23 11:44:12 +0200
22 Jul, 2020 1 commit
- check for doublons when merging alignments · 575b5164
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  Louis BECQUEY authored 2020-07-22 12:44:49 +0000
21 Jul, 2020 3 commits
- Removed known issues files · bb1d3c1b
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  Louis BECQUEY authored 2020-07-21 11:20:44 +0000
- new debug command line options · ceeb8a24
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  Louis BECQUEY authored 2020-07-21 10:39:52 +0200
- selection of nt range for reversed chains · b68b73f6
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  Louis BECQUEY authored 2020-07-21 07:49:30 +0000
17 Jul, 2020 1 commit
- Solved crashes with --no-homology · d9616243
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  Louis BECQUEY authored 2020-07-17 14:41:18 +0200
08 Jul, 2020 1 commit
- Sanitizing post computation checks · 31785c99
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  Louis BECQUEY authored 2020-07-08 18:13:21 +0200
06 Jul, 2020 1 commit
- Better cut dataframes (cut at Rfam mapping) · c21f55fc
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  Louis BECQUEY authored 2020-07-06 20:29:36 +0200
23 Jun, 2020 1 commit
- reduced remap() I/O · 98c2907a
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  Louis BECQUEY authored 2020-06-23 10:20:52 +0200
22 Jun, 2020 1 commit
- better warnings · 6e48f628
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  Louis BECQUEY authored 2020-06-22 21:45:46 +0200
29 May, 2020 2 commits
- Supports mappings of multiple portions to one family · b910de9e
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  Louis BECQUEY authored 2020-05-29 14:44:05 +0200
- force python3.8 for the post-computation scripts · 78e5248c
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  Louis BECQUEY authored 2020-05-29 08:40:50 +0000
23 Apr, 2020 1 commit
- Latest statistics on basepair counts by chain · 6d1b967e
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  Louis BECQUEY authored 2020-04-23 21:52:27 +0200
21 Apr, 2020 1 commit
- ON CONFLICT clauses for SQL updates · 7b99a37e
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  Louis BECQUEY authored 2020-04-21 06:54:04 +0000
20 Apr, 2020 1 commit
- merge with IBISC branch · d9d32d4e
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  Louis BECQUEY authored 2020-04-20 08:18:18 +0000
18 Apr, 2020 4 commits
- better errors with 20A structures · cf484aad
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  Louis BECQUEY authored 2020-04-18 23:04:51 +0200
- Take puckering into account when detecting ligands · c9cbadf0
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  Louis BECQUEY authored 2020-04-18 20:33:21 +0000
- Sqlite connection inside Chain object · 959a521e
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  Louis BECQUEY authored 2020-04-18 14:15:38 +0000
- Pipeline class · 56fd6817
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  Louis BECQUEY authored 2020-04-18 10:54:30 +0000
10 Apr, 2020 1 commit
- That big restructuration before you publish · 343a7ef5
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  Louis BECQUEY authored 2020-04-10 14:42:08 +0000
03 Apr, 2020 3 commits
- only one DSSR analysis on whole mmCIF, shared accross chains · cd84ecd7
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  Louis BECQUEY authored 2020-04-03 20:29:48 +0200
- SQL Corrections · 878a000d
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  Louis BECQUEY authored 2020-04-03 16:18:37 +0200
- using sqlite instead of text files · 95a00b56
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  Louis BECQUEY authored 2020-04-03 07:53:13 +0000
31 Mar, 2020 1 commit
- With stats results · 40cb5b7f
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  Louis BECQUEY authored 2020-03-31 14:05:21 +0000
30 Mar, 2020 2 commits
- Merge branch 'master' of https://github.com/persalteas/RNANet · 36f12c24
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  Louis BECQUEY authored 2020-03-30 13:46:00 +0000
- Statistics over the produced data · f589903e
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  Louis BECQUEY authored 2020-03-30 15:29:09 +0200
28 Mar, 2020 1 commit
- Renamed some descriptors to match the paper · b413f518
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  Louis BECQUEY authored 2020-03-28 12:31:39 +0000