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SNAKES is the Net Algebra Kit for Editors and Simulators

https://www.ibisc.univ-evry.fr/~fpommereau/SNAKES/

Multiscale dataset of non-coding RNA structures, including sequences, secondary structures, non-canonical interactions, 3D geometrical descriptors, and sequence homology.

C Compiler for TTC

Multiscale dataset of non-coding RNA structures, including sequences, secondary structures, non-canonical interactions, 3D geometrical descriptors, and sequence homology.

This repo holds the scripts for the data generation pipeline with diffusion models. Generation is performed on landmark genes and reconstruction on target genes.

Project code of GraphGONet (paper published in Bioinformatics)